Endemic Coral Research Articles

Taxonomic and functional diversity of zooxanthellate corals and hydrocorals in Southwestern Atlantic reefs

The Southwestern Atlantic (SWA) harbors a relatively species poor but highly endemic coral assemblage due to historical processes, environmental and ecological drivers. Despite its low to moderate cover, corals still have a disproportionate contribution to ecosystem function and stability in this region. In the context of global change, it is imperative to know corals’ diversity and biogeographic patterns, yet a comprehensive approach is still missing for SWA corals. We integrated occurrence data from 21 sites and nine functional traits across 20 coral (scleractinian and hydrozoan) species to explore the taxonomic and functional diversity of coral assemblages in the SWA (1°N-27°S). We identified eight regions based on coral species composition, and then described their functional diversity using four metrics: functional richness (FRic), functional dispersion (FDis), functional evenness (FEve), and functional originality (FOri). Taxonomic and functional diversity peak between latitudes 13°S-20°S, decreasing with increasing distance from this diversity center, known as the Abrolhos Bank that harbors a wide continental platform. Our findings reveal a prevalent pattern of high functional redundancy across these eight regions (indicated by low functional originality), with species occupying the edges of the trait space (high functional evenness) and converging around few trait values (low functional dispersion). Such patterns resulted in low taxonomic and functional beta diversity and increased nestedness among regions caused by dispersal barriers and environmental filtering. The Southernmost region (24°-27°S) has the lowest taxonomic and functional diversity and comprises only two species that share similar traits, with these corals being: hermaphrodites, brooders and depth-tolerant, and having a wide corallite. As this region might become critical for corals in a future tropicalization scenario, tropical corals that share similar traits to those of the southernmost region can be more likely to thrive. Knowledge on taxonomic and functional diversity patterns can offer critical information to conservation by helping prioritizing areas with higher diversity and species with traits that enhance survival under climate change.

Potentialities of the combined use of underwater fluorescence imagery and photogrammetry for the detection of fine-scale changes in marine bioconstructors

Marine communities are facing both natural disturbances and anthropogenic stressors. Bioconstructor species are endangered by multiple large-scale and local pressures and the early identification of impacts and damages is a primary goal for preserving coral reefs. Taking advantage of the recent development in underwater photogrammetry, the use of photogrammetry and fluorimetry was coupled to design, test and validate in laboratory a multi-sensor measuring system that could be potentially exploited in open water by SCUBA divers for assessing the health status of corals and detecting relevant biometric parameters with high accuracy and resolution. The approach was tested with fragments of the endemic coral Cladocora caespitosa, the sole zooxanthellate scleractinian reef-builder in the Mediterranean. The most significant results contributing to the scientific advancement of knowledge were: 1) the development of a cost-effective, flexible and easy-to-use approach based on emerging technologies; 2) the achievement of a sub-centimetric resolution for measuring relevant biometric parameters (polyp counting, colony surface areas and volumes); 3) set up of a reliable and repeatable strategy for multi-temporal analyses capable of quantifying changes in coral morphology with sub-centimeter accuracy; 4) detect changes in coral health status at a fine scale and under natural lighting through autofluorescence analysis. The novelty of the present research lies in the coupling of emerging techniques that could be applied to a wide range of 3D morphometrics, different habitats and species, thus paving the way to innovative opportunities in ecological research and more effective results than traditional in-situ measurements. Moreover, the possibility to easily modify the developed system to be installed on an underwater remotely operated vehicle further highlights the possible concrete impact of the research for ecological monitoring and protection purposes.

Unveiling the Venom Composition of the Colombian Coral Snakes Micrurus helleri, M. medemi, and M. sangilensis.

Little is known of the biochemical composition and functional features of the venoms of poorly known Colombian coral snakes. Here, we provide a preliminary characterization of the venom of two Colombian endemic coral snake species, Micrurus medemi and M. sangilensis, as well as Colombian populations of M. helleri. Electrophoresis and RP-HPLC techniques were used to identify venom components, and assays were conducted to detect enzyme activities, including phospholipase A2, hyaluronidase, and protease activities. The median lethal dose was determined using murine models. Cytotoxic activities in primary cultures from hippocampal neurons and cancer cell lines were evaluated. The venom profiles revealed similarities in electrophoretic separation among proteins under 20 kDa. The differences in chromatographic profiles were significant, mainly between the fractions containing medium-/large-sized and hydrophobic proteins; this was corroborated by a proteomic analysis which showed the expected composition of neurotoxins from the PLA2 (~38%) and 3FTx (~17%) families; however, a considerable quantity of metalloproteinases (~12%) was detected. PLA2 activity and protease activity were higher in M. helleri venom according to qualitative and quantitative assays. M. medemi venom had the highest lethality. All venoms decreased cell viability when tested on tumoral cell cultures, and M. helleri venom had the highest activity in neuronal primary culture. These preliminary studies shed light on the venoms of understudied coral snakes and broaden the range of sources that could be used for subsequent investigations of components with applications to specific diseases. Our findings also have implications for the clinical manifestations of snake envenoming and improvements in its medical management.

Intake of trace contaminants by corals in Abrolhos reef bank (western South Atlantic) during two decades of coastal impacts

Abrolhos is the largest and most diverse coral reef system in the South Atlantic. It is home to several endemic coral species and a site of cetaceous reproduction. Like any other reef ecosystem worldwide, it experiences multiple disturbances associated with increasing sea surface temperatures, El Niño events, and, most recently, oil spill pollution. In addition to these global stressors, the Abrolhos region may have been impacted by coastal human interventions, a large-scale mining disaster, floods, and extra-tropical cyclones that affected the region during the last 20 years. Among these stressors, the Fundão dam collapse (the largest in the Southern Hemisphere) deserves special attention since it delivered significant amounts of iron tailings to the nearby coast. To investigate the region's recent history, we collected, dated, and performed detailed geochemical and isotopic analyses on two coral colonies (i.e., Siderastrea stellata and Mussismilia harttii), in order to determine if effects of recent human activity on reef systems (and most recent natural impacts) could be detected thorough bioaccumulation of metals in their skeletons. In this context, we detected an abrupt increase in Fe and Mn concentrations in the coral skeleton, which are among the main constituents of the Fundão dam tailings. We show that a concomitant increase in metal concentrations tracks contaminant dispersion of the Fundão dam tailings released to the western South Atlantic. Besides this event, our data also show that coastal dredging activities in the nearby coral reef site (i.e., at the Tomba channel) and two natural episodes (i.e., the flood of 2013 and the anomalous extra-tropical cyclonic activity in 2008) were also recorded in the coral skeleton based on changes in Rare Earth Elements distribution, Rb and U concentrations.

Size matters when it comes to the survival of transplanted yellow gorgonian fragments

The yellow gorgonian Eunicella cavolini is a Mediterranean endemic coral. Mediterranean populations underwent sharp decreases in the last decades due to climatic anomalies. In the meanwhile, populations in the Sea of Marmara thrive under conditions exempted from significant thermal variations thanks to the peculiar oceanography of the basin. However, they are vulnerable to anthropogenic activities, such as fishing, coastal constructions, dredging and landfilling. Major infrastructure projects at two remote islands, Yassıada and Sivriada, put healthy gorgonian communities at risk. We observed many dead colonies when Yassıada was constructed and before operations commenced on Sivriada, we transplanted gorgonian fragments 13 km away to a site at lower risk from construction. The transplantation site already hosts yellow gorgonian as sparse colonies; but also, it sits within an important fishing area, and entangled nets over rocks are common. Therefore, together with a local NGO, we initiated conservation efforts simultaneously with the transplantation works. 300 gorgonian fragments in the 4.5–15.4 cm size range were transplanted in two years (2017 – 2019). At six months, the survival of the colonies was significantly size dependent. Fragments of 10 – 15.4 cm initial sizes had the highest survival rate (up to 90 %), while small fragments yielded substantially lower survival. Despite severe impacts from fishing nets and mucilaginous entanglement, 50 % of fragments larger than 10 cm survived after 4.5 years of plantation. Besides, several recruits were observed among 4.5 years old transplants. Therefore, when restoration by raw transplantation actions is planned for gorgonians with thin scleraxis, a minimum fragment size of 10 cm is recommended. The study was a notable example of science/NGO collaboration with substantial local conservation success by using extensive media coverage of conservation efforts as leverage to declare the recipient area as a Marine Protected Area.

Microbiota of healthy and bleached corals of the species Siderastrea stellata in response to river influx and seasonality in Brazilian northeast.

Although coral bleaching is increasing worldwide due to warming oceans exacerbated by climate change, there has been a growing recognition that local stressors may play an additional role. Important stressors include the physicochemical and microbiological influences that are related to river runoff. Here, we investigated the microbiota associated to mucus and tissue of endemic coral Siderastrea stellata, collected from Brazilian northeast coral reefs of Barra de Santo Antônio (subject to river runoff) and Maragogi (minimal river runoff) during both the rainy and dry seasons. We sequenced the V4 region of 16S rDNA and used multiple R packages to process raw data and performed statistical analysis to reveal the microbial community structure composition and functional predictions. Major dissimilarities between microbial communities were related to seasonality, while healthy and bleached specimens were mainly associated with the enrichment of several less abundant taxa involved in specific metabolic functions, mainly related to the nitrogen cycle. We were not able to observe the dominance of groups that has been previously associated with bleachings, such as Vibrionaceae or Burkholderiaceae. The influx of freshwater appears to increase the homogeneity between individuals in Barra de Santo Antonio, especially during the rainy season. By contrast, we observed an increased homogeneity between samples in Maragogi during the dry season. Understanding the dynamics of the coral microbiota and how bleaching appears in response to specific environmental variables, in addition to determining the conditions that lead to a more robust coral microbiota, is essential for choosing the most appropriate area and conservation methods, for example.

Assessment of Total Petroleum Hydrocarbon Contamination of the Red Sea with Endemic Fish from Jeddah (Saudi Arabia) as Bioindicator of Aquatic Environmental Pollution

The aim of this study was to determine whether endemic coral fish commonly consumed by Jeddah residents could serve as bioindicators of oil contamination. In addition, we planned to investigate the relationship between amino acid changes and hydrocarbon concentrations in fish tissue. The composition of amino acids was analyzed using high-pressure liquid chromatography with precolumn derivatization. An analytical study of the polycyclic aromatic hydrocarbons and total petroleum hydrocarbons was conducted by combining gas chromatography with gas chromatography/mass spectrometry. Multivariate statistical analysis was applied using Statgraphics software to determine the impact of the polycyclic aromatic hydrocarbons and total petroleum hydrocarbons on the amino acid profile of three species of fish. In addition, the bioconcentration factor was estimated in the studied species and was used to validate the results obtained from the multivariate analysis. Based on the results of the study, the sum of polycyclic aromatic hydrocarbons with two cycles, and with five to six cycles, is in reverse order in Plectropomus pessuliferus with respect to Epinephelus tauvina and Cephalopholis argus. The factor analysis showed high factor scores for aspartic acid, glutamic acid, tyrosine, chrysene, and total petroleum hydrocarbons, and for lipids and benzo(g,h,i)perylene, which could be explained by bioaccumulation. It was concluded that the high proportions of glutamic acid (8.32–11.10%) and aspartic acid (6.06–8.27%) in the muscles of the studied species are a sign of contamination with petroleum hydrocarbons. The incremental lifetime cancer risk values for the three endemic fish exceeded the limit value (>10−5), indicating a high potential cancer risk for the Saudi population.

Using Nd[sbnd]Sr isotopes in suspended sediments in the Abrolhos coral-reef (SW Atlantic, Brazil) to assess potential contamination from the 2015 Fundão dam collapse

The Abrolhos bank is home of the richest coral reef system of the Southwestern Atlantic, where endemic coral species are found. It has been reported that Abrolhos' corals are under intense stress due to increasing of Marine Heat Waves during the last decades. Additionally, anthropic interventions along the adjacent coastal regions are a factor of concern since they contribute to the increase in the sediment load and to organic debris input in the reef domain. In November 2015, the collapse of the Fundão mining tailings dam resulted in the release of approximately 50 million m3 of iron oxide and quartz-rich slurry into the Doce River. Aiming at using a fingerprint of the tailings and to assess the presence of traces of the Fundão dam material from this event on the Abrolhos bank, this work presents new 87Sr/86Sr and 143Nd/144Nd isotope ratios of marine suspended sediment samples collected between 2016 and 2020 from a network of sediment traps throughout the reef and complementary suspended material at sea. In parallel, we monitored meteo-oceanographic parameters and modeled surface marine currents as an attempt to identify the sediment transport between the Doce River mouth and Abrolhos bank. The r isotopes were used as provenance proxies based on the fact that minerals and rocks tend to have specific isotopic signatures reflecting their own geological derivation. In this context, the isotopic ratios of various potential regional sources for the sedimentation in Abrolhos bank were evaluated. Our monitoring and isotopic measurements indicate that Doce River signatures are detected at Abrolhos bank, following the seasonal Doce River discharge at sea. Isotopic signature of Doce River at Abrolhos bank was also observed during the austral winter (July–August) when cold fronts migrate at the Brazilian coast with higher frequency and energy.

Rare coral and reef fish species status, possible extinctions, and associated environmental perceptions in Mauritius

AbstractMauritius is reported to have the highest marine species endemism in the Western Indian Ocean faunal Province but the status of these species has not been evaluated. To address this knowledge gap, 119 reef sites were sampled to evaluate populations of 16 species of rare and endemic reef fish and corals using scuba‐based surveys conducted by citizen scientists and marine science professionals. Additionally, we interviewed ~1,000 households in 27 coastal villages to determine their perceptions of the environmental concerns and rare and endemic marine species. In general, population numbers of both studied corals and fish were low and distributions were patchy, with little indication that the fisheries management zones were protecting these species. The Mauritian gregory and Mauritian anemonefish were the most abundant species. The Mauritian and Creole damselfishes, which are range‐restricted Mascarene endemics, were not observed and potentially extinct. Endemic fish and coral population numbers were higher on the leeward than windward side of the island. The leeward side has higher tourism use and conservation activities that could promote endemic conservation. Environmental concerns of interviewees were high but varied by district and their socioeconomic contexts. Respondents showed an overall concern for the environment and agreed that endemic and rare species had a right to survive. Nevertheless, these rare and endemic coral reef species are threatened by isolation and habitat loss combined with rapid climate and human resource use change. National and district‐specific plans of actions could help to secure their futures.

Population genetic structure of a major reef-building coral species Acropora downingi in northeastern Arabian Peninsula

Current seawater temperatures around the northeastern Arabian Peninsula resemble future global forecasts as temperatures > 35 °C are commonly observed in summer. To provide a more fundamental aim of understanding the structure of wild populations in extreme environmental conditions, we conducted a population genetic study of a widespread, regional endemic table coral species, Acropora downingi, across the northeastern Arabian Peninsula. A total of 63 samples were collected in the southern Arabian/Persian Gulf (Abu Dhabi and Qatar) and the Sea of Oman (northeastern Oman). Using RAD-seq techniques, we described the population structure of A. downingi across the study area. Pairwise G’st and distance-based analyses using neutral markers displayed two distinct genetic clusters: one represented by Arabian/Persian Gulf individuals, and the other by Sea of Oman individuals. Nevertheless, a model-based method applied to the genetic data suggested a panmictic population encompassing both seas. Hypotheses to explain the distinctiveness of phylogeographic subregions in the northeastern Arabian Peninsula rely on either (1) bottleneck events due to successive mass coral bleaching, (2) recent founder effect, (3) ecological speciation due to the large spatial gradients in physical conditions, or (4) the combination of seascape features, ocean circulation and larval traits. Neutral markers indicated a slightly structured population of A. downingi, which exclude the ecological speciation hypothesis. Future studies across a broader range of organisms are required to furnish evidence for existing hypotheses explaining a population structure observed in the study area. Though this is the most thermally tolerant acroporid species worldwide, A. downingi corals in the Arabian/Persian Gulf have undergone major mortality events over the past three decades. Therefore, the present genetic study has important implications for understanding patterns and processes of differentiation in this group, whose populations may be pushed to extinction as the Arabian/Persian Gulf warms.

Linking population size structure, heat stress and bleaching responses in a subtropical endemic coral

Anthropocene coral reefs are faced with increasingly severe marine heatwaves and mass coral bleaching mortality events. The ensuing demographic changes to coral assemblages can have long-term impacts on reef community organisation. Thus, understanding the dynamics of subtropical scleractinian coral populations is essential to predict their recovery or extinction post-disturbance. Here we present a 10-yr demographic assessment of a subtropical endemic coral, Pocillopora aliciae (Schmidt-Roach et al. in Zootaxa 3626:576–582, 2013) from the Solitary Islands Marine Park, eastern Australia, paired with long-term temperature records. These coral populations are regularly affected by storms, undergo seasonal thermal variability, and are increasingly impacted by severe marine heatwaves. We examined the demographic processes governing the persistence of these populations using inference from size-frequency distributions based on log-transformed planar area measurements of 7196 coral colonies. Specifically, the size-frequency distribution mean, coefficient of variation, skewness, kurtosis, and coral density were applied to describe population dynamics. Generalised Linear Mixed Effects Models were used to determine temporal trends and test demographic responses to heat stress. Temporal variation in size-frequency distributions revealed various population processes, from recruitment pulses and cohort growth, to bleaching impacts and temperature dependencies. Sporadic recruitment pulses likely support population persistence, illustrated in 2010 by strong positively skewed size-frequency distributions and the highest density of juvenile corals measured during the study. Increasing mean colony size over the following 6 yr indicates further cohort growth of these recruits. Severe heat stress in 2016 resulted in mass bleaching mortality and a 51% decline in coral density. Moderate heat stress in the following years was associated with suppressed P. aliciae recruitment and a lack of early recovery, marked by an exponential decrease of juvenile density (i.e. recruitment) with increasing heat stress. Here, population reliance on sporadic recruitment and susceptibility to heat stress underpin the vulnerability of subtropical coral assemblages to climate change.

Microbiome community and complexity indicate environmental gradient acclimatisation and potential microbial interaction of endemic coral holobionts in the South China Sea

Regional acclimatisation and microbial interactions significantly influence the resilience of reef-building corals facing anthropogenic climate change, allowing them to adapt to environmental stresses. However, the connections between community structure and microbial interactions of the endemic coral microbiome and holobiont acclimatisation remain unclear. Herein, we used generation sequencing of internal transcribed spacer (ITS2) and 16S rRNA genes to investigate the microbiome composition (Symbiodiniaceae and bacteria) and associated potential interactions of endemic dominant coral holobionts (Pocillopora verrucosa and Turbinaria peltata) in the South China Sea (SCS). We found that shifts in Symbiodiniaceae and bacterial communities of P. verrucosa were associated with latitudinal gradient and climate zone changes, respectively. The C1 sub-clade consistently dominated the Symbiodiniaceae community in T. peltata; yet, the bacterial community structure was spatially heterogeneous. The relative abundance of the core microbiome among P. verrucosa holobionts was reduced in the biogeographical transition zone, while bacterial taxa associated with anthropogenic activity (Escherichia coli and Sphingomonas) were identified in the core microbiomes. Symbiodiniaceae and bacteria potentially interact in microbial co-occurrence networks. Further, increased bacterial, and Symbiodiniaceae α-diversity was associated with increased and decreased network complexity, respectively. Hence, Symbiodiniaceae and bacteria demonstrated different flexibility in latitudinal or climatic environmental regimes, which correlated with holobiont acclimatisation. Core microbiome analysis has indicated that the function of core bacterial microbiota might have changed in distinct environmental regimes, implying potential human activity in the coral habitats. Increased bacterial α diversity may lead to a decline in the stability of coral-microorganism symbioses, whereas rare Symbiodiniaceae may help to retain symbioses. Cladocopium, γ-proteobacteria, while α-proteobacteria may have been the primary drivers in the Symbiodiniaceae-bacterial interactions (SBIs). Our study highlights the association between microbiome shift in distinct environmental regimes and holobiont acclimatisation, while providing insights into the impact of SBIs on holobiont health and acclimatisation during climate change.

Reproduction of the endangered endemic saffron coral to the Gulf of California Porites sverdrupi (Anthozoa: Scleractinia): implications for its long-term maintenance

The biology of the scleractinian Porites sverdrupi, endemic to the Gulf of California, is poorly studied. In order to fill that gap, the present study documents the reproductive biology of this coral which is to date protected by the IUCN’s as “vulnerable” and listed as “in risk of extinction” in the Mexican Federal Law for species protection. Also, potential distribution models were constructed to evaluate the status of the remaining species’ populations, and the role that reproduction has in their permanence. Porites sverdrupi show a gonochoric brooding reproductive pattern, with asynchronous gamete development regulated by sea surface temperature and light. The potential distribution models suggest that this coral currently covers less than 6% of its original range of distribution. Furthermore, the results suggest that, despite the drastic decline of the species, the remaining populations have the ability to persist even under current changing ocean conditions as successful sexual reproduction was documented even during the strong 2014–2015 ENSO event producing sexual recruits to maintain themselves.

Case-control design identifies ecological drivers of endemic coral diseases

Endemic disease transmission is an important ecological process that is challenging to study because of low occurrence rates. Here, we investigate the ecological drivers of two coral diseases–growth anomalies and tissue loss–affecting five coral species. We first show that a statistical framework called the case-control study design, commonly used in epidemiology but rarely applied to ecology, provided high predictive accuracy (67–82%) and disease detection rates (60–83%) compared with a traditional statistical approach that yielded high accuracy (98–100%) but low disease detection rates (0–17%). Using this framework, we found evidence that 1) larger corals have higher disease risk; 2) shallow reefs with low herbivorous fish abundance, limited water motion, and located adjacent to watersheds with high fertilizer and pesticide runoff promote low levels of growth anomalies, a chronic coral disease; and 3) wave exposure, stream exposure, depth, and low thermal stress are associated with tissue loss disease risk during interepidemic periods. Variation in risk factors across host-disease pairs suggests that either different pathogens cause the same gross lesions in different species or that the same disease may arise in different species under different ecological conditions.

Genomic repertoire of Mameliella alba Ep20 associated with Symbiodinium from the endemic coral Mussismilia braziliensis

Bacteria associated with Symbiodinium may exert relevant roles in the Symbiodinium and the coral host. The bacterial isolate Ep20 was obtained from cell suspensions of Symbiodinium retrieved from the endemic coral Mussismilia braziliensis (Abrolhos Bank, Brazil). Here we aimed to analyze the genomic repertoire of Ep20 to gain insights into its possible roles in the coral holobiont. Ep20 enhanced the growth of Symbiodinium under controlled laboratory conditions, possibly through nitrogen fixation and vitamin production. The genome of Ep20 contains 5.5 Mbp (65% G + C content), 5397 genes, 53 tRNAs, and four rRNAs. Ep20 was identified as Mameliella alba, a member of the Roseobacter Clade Bacteria (RCB, Alphaproteobacteria). The genomic repertoire of Ep20 includes genes responsible for i. Aerobic Anoxygenic Photosynthesis (AAP), ii. Cofactors and vitamins (B12), iii. Gene Transfer Agents (GTAs), iv. Dimethylsulfoniopropionate (DMSP) metabolism, v. Carbon and Nitrogen fixation, and vi. Secondary metabolites (e.g., Terpenes). The genomic attributes of Ep20 hint at a possible mutualistic interaction with Symbiodinium, both in the free-living and in the coral holobiont lifestyles.

Modeling impacts of climate change on the potential habitat of an endangered Brazilian endemic coral: Discussion about deep sea refugia.

Climate and environmental conditions are determinant for coral distribution and their very existence. When changes in such conditions occur, their effects on distribution can be predicted through species distribution models, anticipating suitable habitats for the subsistence of species. Mussismilia harttii is one of the most endangered Brazilian endemic reef-building corals, and in increasing risk of extinction. Herein, species distribution models were used to determine the present and future potential habitats for M. harttii. Estimations were made through the maximum entropy approach, predicting suitable habitat losses and gains by the end of the 21st century. For this purpose, species records published in the last 20 years and current and future environmental variables were correlated. The best models were chosen according to the Akaike information criterion (AIC) and evaluated through the partial ROC (AUCratio), a new approach which uses independent occurrence data. Both approaches showed that the models performed satisfactorily in predicting potential habitat areas for the species. Future projections were made using the International Panel on Climate Change (IPCC) scenarios for 2100, with different levels of greenhouse gas emission. Representative Concentration Pathways (RCPs) were used to model the Future Potential Habitat (FPH) of M. harttii in two different scenarios: stabilization of emissions (RCP 4.5) and increase of emissions (RCP 8.5). According to the results, shallow waters to the south of the study area concentrate most of the current potential habitats for the species. However, in future scenarios, there was a loss of suitable areas in relation to the Current Potential Habitat (RCP 4.5 46% and RCP 8.5 59%), whereas there is a southward shift of the suitable areas. In all scenarios of FPH, the temperature was the variable with the greatest contribution to the models (> 35%), followed by the current velocity (> 33%) and bathymetry (>29%). In contrast, there is an increase of deep (50–75 m) suitable areas FPH scenarios, mainly in the southern portion of its distribution, at Abrolhos Bank (off Espirito Santo State). These deeper sites might serve as refugia for the species in global warming scenarios. Coral communities at such depths would be less susceptible to impacts of climate change on temperature and salinity. However, the deep sea is not free from human impacts and measures to protect deeper ecosystems should be prioritized in environmental policies for Brazilian marine conservation, especially the Abrolhos Bank, due to its importance for M. harttii.

Understanding the origin of the most isolated endemic reef fish fauna of the Indo‐Pacific: Coral reef fishes of Rapa Nui

AbstractAimTo understand the origin of the most isolated endemic fish fauna of the Indo‐Pacific, Easter Island (Rapa Nui), and to infer divergence times and colonization routes of the endemic coral reef fish fauna from their closest relatives.LocationEaster Island, Pacific Ocean.MethodsSamples of ten species were used: six small‐range species endemic to Rapa Nui and Motu Motiro Hiva (Salas y Gómez) (i.e. small‐range endemic species) and four large‐range species endemic to the southern subtropical Pacific (i.e. large‐range endemic species). We present phylogenetic reconstruction results based on mitochondrial (1 to 5) and nuclear (1 to 6) loci to place these endemic species in their respective family phylogenies (8). Using these newly calibrated phylogenetic trees, information of species distributions and geological data, we inferred the divergence times from the closest relatives of these ten endemic fishes, compared biogeographical history estimation models to reconstruct their ancestral geographic ranges, colonization routes and underlying mechanisms of speciation.ResultsThe divergence times (i.e. divergence times from the closest relatives) of all of the small‐range endemics studied were more recent than the age of Rapa Nui and Motu Motiro Hiva; thus, these species can be considered as neoendemics. Biogeographical history estimation models indicated that speciation following a founder‐event is the most likely scenario. In contrast, the divergence estimates of the large‐range endemic species were highly variable. This being said, the divergence times of all species were more recent than the age of the oldest islands within their distributions.Main conclusionsTaken together, these results demonstrate that Rapa Nui acts as a cradle of coral reef biodiversity, being responsible for the emergence of small‐range endemic fish species, but also a route of dispersion for several large‐range endemics and as a stepping stone in the diversification of the Myripristis and Pseudolabrus genera. While no common divergence time was recovered for all of the ten endemic species studied here, the common mechanism of speciation following a founder event was recovered for most of the small‐range endemic species.

Megaviridae-like particles associated with Symbiodinium spp. from the endemic coral Mussismilia braziliensis

Coral reefs are one of the most dynamic and productive marine ecosystems. The coral holobiont consists of the coral animal and a variety of associated microorganisms that include symbiotic dinoflagellates of the genus Symbiodinium, bacteria, archaea, fungi and viruses. The interactions among these components are crucial for coral health and, consequently, to the coral reef resilience to disturbance. Environmental stressors such as elevated temperature, high irradiance and ultraviolet (UV) radiation can lead to the breakdown of the coral-Symbiodinium symbiosis in a phenomenon known as “coral bleaching”. The present study provides evidence for virus-like particles (VLPs) induced in UV-irradiated Symbiodinium spp. cultures (clades A and C) that were isolated from the coral Mussismilia braziliensis, suggesting a latent viral infection in these strains. Scanning and transmission electron microscopy images of the UV stressed cultures revealed the presence of giant (ca. 450 nm) and small (ca. 40 nm) VLPs. Morphological features link the giant VLPs to the family Megaviridae. Symbiodinium spp. Megaviridae giant viruses and other associated viruses may represent dynamic forces driving and influencing health of the coral holobiont.

The ecology of the Mediterranean stony coral Cladocora caespitosa (Linnaeus, 1767) in the Gulf of Trieste (northern Adriatic Sea): a 30-year long story

ABSTRACTCladocora caespitosa is an endemic coral of the Mediterranean Sea and an important carbonate bioconstructor that adds 3D complexity to the habitat, thus increasing marine biodiversity. Despite its important role in the ecosystem, the real status of the population along most of the Mediterranean coastline is still poorly investigated and very little is known about the resilience of the species. Using non-destructive visual surveys, colonies of C. caespitosa were investigated by SCUBA diving in 2013 and 2015 at seven sites of the northern Adriatic Sea (southern part of the Gulf of Trieste). Data about colony size, index of sphericity and corallite diameter were collected. Almost all biometrical parameters differed significantly among sampling sites, showing low occurrence of the larger size classes compared to the abundance of small-sized colonies. This pattern of distribution is typical of long-lived organisms. The positively skewed colony size distribution could be due to both a high mortality rate of small colonies unable to reach larger size classes, and to a high fragmentation rate of colonies, related to a strong hydrodynamic forces. The northern Adriatic population of C. caespitosa has previously been investigated by Schiller, who reported size and abundance data of colonies from one site, at a depth range of 2–5 m. We compared these data with our findings from the same sampling site, adding new information about the ecology of C. caespitosa. After a 30-year period, the comparison shows a change in the size distribution of colonies, with a decrease of the small class and an increase of the medium class of colonies. In view of these conclusions, further assessments are required in order to evaluate the trend of the northernmost C. caespitosa population in the Mediterranean Sea.

Diverse Evidence for the Decline of an Adaptation in a Coral Snake Mimic

Losses of adaptations in response to changed selective pressures are evolutionarily important phenomena but relatively few empirical examples have been investigated in detail. To help fill this gap, we took advantage of a natural experiment in which coral snake mimics occur on two nearby tropical islands, one that has coral snake models (Trinidad) and one that lacks them (Tobago). On Tobago, an endemic coral snake mimic (Erythrolamprus ocellatus) exists but has a relatively poor resemblance to coral snakes. Quantitative image analysis of museum specimens confirmed that E. ocellatus is a poor mimic of coral snakes. To address questions related to the functional importance of this phenotype, we conducted a field experiment on both islands with snake replicas made of clay. These results clearly indicated a strong inter-island difference in predator attack rates where snake replicas that resembled coral snakes received protection in Trinidad but not in Tobago. Further, a molecular phylogenetic analysis of the ancestry of E. ocellatus revealed that this poor coral snake mimic is deeply nested in a clade of good coral snake mimics. These data suggest that the lack of coral snakes on Tobago altered the selective environment such that the coral snake mimicry adaptation was no longer advantageous. The failure to maintain this ancestral feature in allopatry provides a compelling example of how losses of complex adaptations can occur.