The search for simple and minimally invasive methods of diagnostics of the functional status of professional soccer players was always the object of the interest of sport medicine and physiology. The aim of research was the increase of medical control of the professional soccer players by elaboration and introduction of methodology of integral assessment of the soccer players’ functional status using the program-hardware complex Fazagraf ® . Methods of research. The research included 34 professional players in the age 18-34 years. The research was carried out during the football season in different training periods and included instrumental methodology of assessment of the functional status using apparatus fazagraf and also the methodology of assessment of the functional status, offered by us. Results of research. With the help of the offered methodology it was established, that at the end of basic period the low marks of FS (1,2 and 3) were not fixed. All soccer players were in the good and very good FS. At the end of competitive period of training it was revealed, that in 11 soccer players (32%) were observed the low indices of integral assessment that is FS disorders. Conclusion: in the basic period of training takes place the increase of adaptive potential and decrease of the risk of development of disorders in sportsmen’s health. In competitive period of training were observed the disorders of functional status under the effect of big physical loads and other factors that needs more attention to the medical control in this training period