Early Mammalian Evolution Research Articles

Evolution of tooth morphological complexity and its association with the position of tooth eruption in the jaw in non-mammalian synapsids.

Heterodonty and complex molar morphology are important characteristics of mammals acquired during the evolution of early mammals from non-mammalian synapsids. Some non-mammalian synapsids had only simple, unicuspid teeth, whereas others had complex, multicuspid teeth. In this study, we reconstructed the ancestral states of tooth morphological complexity across non-mammalian synapsids to show that morphologically complex teeth evolved independently multiple times within Therapsida and that secondary simplification of tooth morphology occurred in some non-mammalian Cynodontia. In some mammals, secondary evolution of simpler teeth from complex molars has been previously reported to correlate with an anterior shift of tooth eruption position in the jaw, as evaluated by the dentition position relative to the ends of component bones used as reference points in the upper jaw. Our phylogenetic comparative analyses showed a significant correlation between an increase in tooth complexity and a posterior shift in the dentition position relative to only one of the three specific ends of component bones that we used as reference points in the upper jaw of non-mammalian synapsids. The ends of component bones depend on the shape and relative area of each bone, which appear to vary considerably among the synapsid taxa. Quantification of the dentition position along the anteroposterior axis in the overall cranium showed suggestive evidence of a correlation between an increase in tooth complexity and a posterior shift in the dentition position among non-mammalian synapsids. This correlation supports the hypothesis that a posterior shift of tooth eruption position relative to the morphogenetic fields that determine tooth form have contributed to the evolution of morphologically complex teeth in non-mammalian synapsids, if the position in the cranium represents a certain point in the morphogenetic fields.

A new euharamiyidan, Mirusodens caii (Mammalia: Euharamiyida), from the Jurassic Yanliao Biota and evolution of allotherian mammals

Abstract Allotheria are an extinct group of mammaliaforms that originally comprised multituberculates, to which ‘haramiyidans’ and gondwanatherians were later added. Phylogenetic relationships of allotherians have remained controversial since the first reports of the allotherian fossils in the 1800s. Here we report a new euharamiyidan based on a skeletal specimen from the Jurassic Daohugou phase of the Yanliao Biota, China. The superb specimen preserves impressions of differentiated hairs. The pes with impressions of toe skin and claw sheath represents the first such evidence in Mesozoic mammaliamorphs. The remarkable tooth morphologies surpass in complexity any Mesozoic mammals previously known. Phylogenetic analyses place the new species within euharamiyidans from Eurasia and support euharamiyidans, multituberculates, and gondwanatherians as a tripartite monophyletic Allotheria within mammals. This clade is supported not only by their similar molar pattern, but also by many shared derived features of the dental system recognized from discoveries during the last two decades. Allotherians and therians represent the two most successful groups of mammals that are characterized by distinct dental systems. They originated at the latest in the Late Triassic and became diversified in the Middle Jurassic, representing two directions of ecomorphological adaptation during early evolution of mammals.

THE MAIN DIRECTIONS OF MAMMALIAN EVOLUTION

Modern views on the origin and early evolution of mammals are presented. The work uses the material accumulated by the author on the morphology of modern and fossil monotremes, marsupials and placentals. Data on Mesozoic mammals, including those obtained in recent years, are summarized. A model of the mechanism of morphogenetic transformations during the evolutionary development of Mammalia is proposed. An overview of the main directions of the formation of mammals from the Late Triassic to the Cenozoic is given.

Origin and Early Evolution of Mammals

Origin and Early Evolution of Mammals

Investigating Mesozoic Climate Trends and Sensitivities With a Large Ensemble of Climate Model Simulations.

The Mesozoic era (∼252 to 66 million years ago) was a key interval in Earth's evolution toward its modern state, witnessing the breakup of the supercontinent Pangaea and significant biotic innovations like the early evolution of mammals. Plate tectonic dynamics drove a fundamental climatic transition from the early Mesozoic supercontinent toward the Late Cretaceous fragmented continental configuration. Here, key aspects of Mesozoic long‐term environmental changes are assessed in a climate model ensemble framework. We analyze so far the most extended ensemble of equilibrium climate states simulated for evolving Mesozoic boundary conditions covering the period from 255 to 60 Ma in 5 Myr timesteps. Global mean temperatures are generally found to be elevated above the present and exhibit a baseline warming trend driven by rising sea levels and increasing solar luminosity. Warm (Triassic and mid‐Cretaceous) and cool (Jurassic and end‐Cretaceous) anomalies result from pCO2 changes indicated by different reconstructions. Seasonal and zonal temperature contrasts as well as continental aridity show an overall decrease from the Late Triassic‐Early Jurassic to the Late Cretaceous. Meridional temperature gradients are reduced at higher global temperatures and less land area in the high latitudes. With systematic sensitivity experiments, the influence of paleogeography, sea level, vegetation patterns, pCO2, solar luminosity, and orbital configuration on these trends is investigated. For example, long‐term seasonality trends are driven by paleogeography, but orbital cycles could have had similar‐scale effects on shorter timescales. Global mean temperatures, continental humidity, and meridional temperature gradients are, however, also strongly affected by pCO2.

Reptile-like physiology in Early Jurassic stem-mammals

Despite considerable advances in knowledge of the anatomy, ecology and evolution of early mammals, far less is known about their physiology. Evidence is contradictory concerning the timing and fossil groups in which mammalian endothermy arose. To determine the state of metabolic evolution in two of the earliest stem-mammals, the Early Jurassic Morganucodon and Kuehneotherium, we use separate proxies for basal and maximum metabolic rate. Here we report, using synchrotron X-ray tomographic imaging of incremental tooth cementum, that they had maximum lifespans considerably longer than comparably sized living mammals, but similar to those of reptiles, and so they likely had reptilian-level basal metabolic rates. Measurements of femoral nutrient foramina show Morganucodon had blood flow rates intermediate between living mammals and reptiles, suggesting maximum metabolic rates increased evolutionarily before basal metabolic rates. Stem mammals lacked the elevated endothermic metabolism of living mammals, highlighting the mosaic nature of mammalian physiological evolution.

Evolution of Orexin Neuropeptide System: Structure and Function.

Orexins are hypothalamic neuropeptides that were initially identified in the rat brain as endogenous ligands for an (previously) orphan G-protein-coupled receptor (GPCR). They are multitasking peptides involved in many physiological functions, including regulation of feeding behavior, wakefulness and autonomic/neuroendocrine functions, and sleep/wakefulness states in mammals. There are two isopeptides of orexin, orexin A and orexin B, which are produced from a common precursor peptide, prepro-orexin. Structures of orexins, as well as orexin genes, are highly conserved throughout mammalian species, suggesting strong evolutionary pressure that maintains the structures. Their lengths and structure suggested that orexin B is the ancestral form of the orexin neuropeptide. In mammals, orexins bind to two subtypes of GPCRs, i.e., orexin 1 receptor (OX1R) and orexin 2 receptor (OX2R). Phylogenetically, the orexin system is present exclusively in vertebrates. In genomes of species outside mammals, there is only one orexin receptor, which is similar to OX2R, suggesting that OX2R is the prototype receptor for orexins. OX1R is likely to have evolved during early mammalian evolution. Orexin-producing neurons (orexin neurons) are mainly located in the lateral hypothalamic area (LHA) in mammals and are also found in hypothalamic regions in many other vertebrates. Orexins are likely to be closely related to the regulation of active, motivated behavior in many species. The orexin system seems to have evolved as a system that supports active and purposeful behavior which is closely related with wakefulness.

Tip dating supports novel resolutions of controversial relationships among early mammals.

The estimation of the timing of major divergences in early mammal evolution is challenging owing to conflicting interpretations of key fossil taxa. One contentious group is Haramiyida, the earliest members of which are from the Late Triassic. Many phylogenetic analyses have placed haramiyidans in a clade with multituberculates within crown Mammalia, thus extending the minimum divergence date for the crown group deep into the Triassic. A second taxon of interest is the eutherian Juramaia from the Middle–Late Jurassic Yanliao Biota, which is morphologically very similar to eutherians from the Early Cretaceous Jehol Biota and implies a very early origin for therian mammals. Here, we apply Bayesian tip-dated phylogenetic methods to investigate these issues. Tip dating firmly rejects a monophyletic Allotheria (multituberculates and haramiyidans), which are split into three separate clades, a result not found in any previous analysis. Most notably, the Late Triassic Haramiyavia and Thomasia are separate from the Middle Jurassic euharamiyidans. We also test whether the Middle–Late Jurassic age of Juramaia is ‘expected’ given its known morphology by assigning an age prior without hard bounds. Strikingly, this analysis supports an Early Cretaceous age for Juramaia, but similar analyses on 12 other mammaliaforms from the Yanliao Biota return the correct, Jurassic age. Our results show that analyses incorporating stratigraphic data can produce results very different from other methods. Early mammal evolution may have involved multiple instances of convergent morphological evolution (e.g. in the dentition), and tip dating may be a method uniquely suitable to recognizing this owing to the incorporation of stratigraphic data. Our results also confirm that Juramaia is anomalous in exhibiting a much more derived morphology than expected given its age, which in turn implies very high rates of evolution at the base of therian mammals.

Convergent Co-option of the Retroviral gag Gene during the Early Evolution of Mammals

Endogenous retroviruses, records of past retroviral infections, are ubiquitous in vertebrate genomes. On occasion, vertebrate hosts have co-opted retroviral genes for their own biological functions. Here, we perform a phylogenomic survey of retroviral gag gene homologs within vertebrate genomes and identify two ancient co-opted retroviral gag genes, designated wucaishi1 (wcs1) and wucaishi2 (wcs2), in mammals. Conserved synteny and evolutionary analyses suggest that the wcs1 and wcs2 co-options occurred before the origin of modern placental mammals (∼100 million years ago) and before the origin of modern marsupials (∼80 million years ago), respectively. We found that the wcs genes were lost or pseudogenized multiple times during the evolutionary course of mammals. While the wcs1 gene is mainly subject to negative selection in placental mammals (except in Perissodactyla), the wcs2 gene underwent positive selection in marsupials. Moreover, analyses of transcriptome-sequencing (RNA-seq) data suggest that the wcs1 and the wcs2 genes are expressed in a wide range of tissues. The convergent wcs co-option in mammals implies the retroviral gag gene might have been repurposed more frequently than previously thought.IMPORTANCE Retroviruses occasionally can infect host germ lines, forming endogenous retroviruses. Vertebrates, in turn, recruited retroviral genes for their own biological functions, a process formally known as co-option or exaptation. To date, co-opted retroviral gag genes have rarely been reported. In this study, we identified two co-opted retroviral gag genes, designated wucaishi1 (wcs1) and wucaishi2 (wcs2), in mammals. The co-option of wcs1 and wcs2 occurred before the origin of modern placentals and before the origin of modern marsupials, respectively. Our study indicates that retroviral gag gene co-option might have occurred more frequently than previously thought during the evolutionary course of vertebrates.

Palaeontology: Many Babies or Bigger Brains?

A cynodont from the Early Jurassic reveals unexpectedly large litters in these early mammal relatives, supporting the hypothesis that an increase in brain size was connected to smaller litters during the early evolution of mammals.

Enamel formation and growth in non-mammalian cynodonts.

The early evolution of mammals is associated with the linked evolutionary origin of diphyodont tooth replacement, rapid juvenile growth and determinate adult growth. However, specific relationships among these characters during non-mammalian cynodont evolution require further exploration. Here, polarized light microscopy revealed incremental lines, resembling daily laminations of extant mammals, in histological sections of enamel in eight non-mammalian cynodont species. In the more basal non-probainognathian group, enamel extends extremely rapidly from cusp to cervix. By contrast, the enamel of mammaliamorphs is gradually accreted, with slow rates of crown extension, more typical of the majority of non-hypsodont crown mammals. These results are consistent with the reduction in dental replacement rate across the non-mammalian cynodont lineage, with greater rates of crown extension required in most non-probainognathians, and slower crown extension rates permitted in mammaliamorphs, which have reduced patterns of dental replacement in comparison with many non-probainognathians. The evolution of mammal-like growth patterns, with faster juvenile growth and more abruptly terminating adult growth, is linked with this reduction in dental replacement rates and may provide an additional explanation for the observed pattern in enamel growth rates. It is possible that the reduction in enamel extension rates in mammaliamorphs reflects an underlying reduction in skeletal growth rates at the time of postcanine formation, due to a more abruptly terminating pattern of adult growth in these more mammal-like, crownward species.

Temporal niche expansion in mammals from a nocturnal ancestor after dinosaur extinction.

Most modern mammals, including strictly diurnal species, exhibit sensory adaptations to nocturnal activity that are thought to be the result of a prolonged nocturnal phase or 'bottleneck' during early mammalian evolution. Nocturnality may have allowed mammals to avoid antagonistic interactions with diurnal dinosaurs during the Mesozoic. However, understanding the evolution of mammalian activity patterns is hindered by scant and ambiguous fossil evidence. While ancestral reconstructions of behavioural traits from extant species have the potential to elucidate these patterns, existing studies have been limited in taxonomic scope. Here, we use an extensive behavioural dataset for 2,415 species from all extant orders to reconstruct ancestral activity patterns across Mammalia. We find strong support for the nocturnal origin of mammals and the Cenozoic appearance of diurnality, although cathemerality (mixed diel periodicity) may have appeared in the late Cretaceous. Simian primates are among the earliest mammals to exhibit strict diurnal activity, some 52-33 million years ago. Our study is consistent with the hypothesis that temporal partitioning between early mammals and dinosaurs during the Mesozoic led to a mammalian nocturnal bottleneck, but also demonstrates the need for improved phylogenetic estimates for Mammalia.

Neutron Tomography and X-ray Tomography as Tools for the Morphological Investigation of Non-mammalian Synapsids

As having evolved on the stem line of mammals, the taxonomy and phylogeny of therapsids (Synapsida) are of special interest with respect to early mammalian evolution. Due to the fact that in most cases soft tissue of fossil vertebrates is not preserved, species can only be distinguished by diagnosis of morphological features of the skeleton. Moreover, investigations of vertebrate fossils are often obstructed, because internal cranial anatomy is usually hidden and parts of the fossils may be embedded in stone matrix. As a consequence, most species of non-mammalian synapsids were only defined on the basis of external skeletal features. Our investigations on Diictodon skulls (Therapsida, Anomodontia) show that non-destructive methods are very useful to clearly distinguish fossil species. We, therefore, propose using modern non-destructive techniques such as neutron tomography, synchrotron tomography, and micro-computed tomography (μCT) as standard tools for the investigation and virtual reconstruction of fossils and to include features of the internal cranial anatomy into morphological descriptions and phylogenetic analyses of fossil vertebrates.

High‐precision U‐Pb geochronology of the Jurassic Yanliao Biota from Jianchang (western Liaoning Province, China): Age constraints on the rise of feathered dinosaurs and eutherian mammals

AbstractThe Yanliao Biota of northeastern China comprises the oldest feathered dinosaurs, transitional pterosaurs, as well as the earliest eutherian mammals, multituberculate mammals, and new euharamiyidan species that are key elements of the Mesozoic biotic record. Recent discovery of the Yanliao Biota in the Daxishan section near the town of Linglongta, Jianchang County in western Liaoning Province have greatly enhanced our knowledge of the transition from dinosaurs to birds, primitive to derived pterosaurs, and the early evolution of mammals. Nevertheless, fundamental questions regarding the correlation of fossil‐bearing strata, rates of dinosaur and mammalian evolution, and their relationship to environmental change in deep time remain unresolved due to the paucity of precise and accurate temporal constraints. These limitations underscore the importance of placing the rich fossil record of Jianchang within a high‐resolution chronostratigraphic framework that has thus far been hampered by the relatively low precision of in situ radioisotopic dating techniques. Here we present high‐precision U‐Pb zircon geochronology by the chemical abrasion isotope dilution thermal ionization mass spectrometry (CA‐ID‐TIMS) from three interstratified ash beds previously dated by secondary‐ion mass spectrometry (SIMS) technique. The results constrain the key fossil horizons of the Daxishan section to an interval spanning 160.89 to 160.25 Ma with 2σ analytical uncertainties that range from ±46 to ±69 kyr. These data place the Yanliao Biota from Jianchang in the Oxfordian Stage of the Late Jurassic, and mark the Daxishan section as the site of Earth's oldest precisely dated feathered dinosaurs and eutherian mammals.

The crouching of the shrew: Mechanical consequences of limb posture in small mammals.

An important trend in the early evolution of mammals was the shift from a sprawling stance, whereby the legs are held in a more abducted position, to a parasagittal one, in which the legs extend more downward. After that transition, many mammals shifted from a crouching stance to a more upright one. It is hypothesized that one consequence of these transitions was a decrease in the total mechanical power required for locomotion, because side-to-side accelerations of the body have become smaller, and thus less costly with changes in limb orientation. To test this hypothesis we compared the kinetics of locomotion in two mammals of body size close to those of early mammals (< 40 g), both with parasagittally oriented limbs: a crouching shrew (Blarina brevicauda; 5 animals, 17 trials) and a more upright vole (Microtus pennsylvanicus; 4 animals, 22 trials). As predicted, voles used less mechanical power per unit body mass to perform steady locomotion than shrews did (P = 0.03). However, while lateral forces were indeed smaller in voles (15.6 ± 2.0% body weight) than in shrews (26.4 ± 10.9%; P = 0.046), the power used to move the body from side-to-side was negligible, making up less than 5% of total power in both shrews and voles. The most power consumed for both species was that used to accelerate the body in the direction of travel, and this was much larger for shrews than for voles (P = 0.01). We conclude that side-to-side accelerations are negligible for small mammals–whether crouching or more upright–compared to their sprawling ancestors, and that a more upright posture further decreases the cost of locomotion compared to crouching by helping to maintain the body’s momentum in the direction of travel.

Asp-ase Activity of the Opossum Granzyme B Supports the Role of Granzyme B as Part of Anti-Viral Immunity Already during Early Mammalian Evolution.

Granzyme B is one of the key effector molecules in our defense against viruses and intracellular bacteria. This serine protease together with the pore forming protein perforin, induces caspase or Bid-dependent apoptosis in target cells. Here we present the first characterization of a granzyme B homolog, the grathepsodenase, in a non-placental mammal, the American opossum (Monodelphis domestica). The recombinant enzyme was produced in a human cell line and used to study its primary and extended cleavage specificity using a panel of chromogenic substrates and recombinant protein substrates. The opossum granzyme B was found to have a specificity similar to human granzyme B, although slightly less restrictive in its extended specificity. The identification of a granzyme B homolog with asp-ase (cleaving after aspartic acid) specificity in a non-placental mammal provides strong indications that caspase or Bid-dependent apoptosis by a serine protease with a conserved primary specificity has been part of anti-viral immunity since early mammalian evolution. This finding also indicates that an asp-ase together with a chymase were the first two serine protease genes to appear in the mammalian chymase locus.

Insights into Sex Chromosome Evolution and Aging from the Genome of a Short-Lived Fish

The killifish Nothobranchius furzeri is the shortest-lived vertebrate that can be bred in the laboratory. Its rapid growth, early sexual maturation, fast aging, and arrested embryonic development (diapause) make it an attractive model organism in biomedical research. Here, we report a draft sequence of its genome that allowed us to uncover an intra-species Y chromosome polymorphism representing-in real time-different stages of sex chromosome formation that display features of early mammalian XY evolution "in action." Our data suggest that gdf6Y, encoding a TGF-β family growth factor, is the master sex-determining gene in N.furzeri. Moreover, we observed genomic clustering of aging-related genes, identified genes under positive selection, and revealed significant similarities of gene expression profiles between diapause and aging, particularly for genes controlling cell cycle and translation. The annotated genome sequence is provided as an online resource (http://www.nothobranchius.info/NFINgb).

Reconstructing the Auditory Apparatus of Therapsids by Means of Neutron Tomography

The internal cranial structure of mammalian ancestors, i.e. the therapsids or “mammal-like reptiles”, is crucial for understanding the early mammalian evolution. In the past therapsid skulls were investigated by mechanical sectioning or serial grinding, which was a very time-consuming and destructive process and could only be applied to non-valuable or poorly preserved specimens. As most therapsid skulls are embedded in terrestrial iron-rich sediments of Late Permian or Triassic age, i.e. so called “Red beds”, a successful investigation with X-Rays is often not possible.We successfully investigated therapsid skulls by means of neutron tomography at the facility ANTARES at FRM II in Munich using cold neutron radiation. This kind of radiation is able to penetrate iron-rich substances in the range between 5 and 15cm and produces a good contrast between matrix and bones, which enables segmentation of internal cranial structures such as bones, cavities and canals of nerves and blood vessels. In particular, neutron tomography combined with methods of 3D modeling was used here for the investigation and reconstruction of the auditory apparatus of therapsids.

Multiple lineages of ancient CR1 retroposons shaped the early genome evolution of amniotes.

Chicken repeat 1 (CR1) retroposons are long interspersed elements (LINEs) that are ubiquitous within amniote genomes and constitute the most abundant family of transposed elements in birds, crocodilians, turtles, and snakes. They are also present in mammalian genomes, where they reside as numerous relics of ancient retroposition events. Yet, despite their relevance for understanding amniote genome evolution, the diversity and evolution of CR1 elements has never been studied on an amniote-wide level. We reconstruct the temporal and quantitative activity of CR1 subfamilies via presence/absence analyses across crocodilian phylogeny and comparative analyses of 12 crocodilian genomes, revealing relative genomic stasis of retroposition during genome evolution of extant Crocodylia. Our large-scale phylogenetic analysis of amniote CR1 subfamilies suggests the presence of at least seven ancient CR1 lineages in the amniote ancestor; and amniote-wide analyses of CR1 successions and quantities reveal differential retention (presence of ancient relics or recent activity) of these CR1 lineages across amniote genome evolution. Interestingly, birds and lepidosaurs retained the fewest ancient CR1 lineages among amniotes and also exhibit smaller genome sizes. Our study is the first to analyze CR1 evolution in a genome-wide and amniote-wide context and the data strongly suggest that the ancestral amniote genome contained myriad CR1 elements from multiple ancient lineages, and remnants of these are still detectable in the relatively stable genomes of crocodilians and turtles. Early mammalian genome evolution was thus characterized by a drastic shift from CR1 prevalence to dominance and hyperactivity of L2 LINEs in monotremes and L1 LINEs in therians.

The heyday of paleontology in China

Life is the most exquisite and splendid natural outcome on our planet. Life has arisen as an evolutionary experiment of the continually and erratically changing earth system that has persisted for the 4.5 billion years since the formation of this planet. The enormous biodiversity we see today represents a small fraction of the life that has ever existedonearth.As the ‘luckiest’ andmost intelligent species of all beings, we humans, with our unique and consciousminds, have never stopped inquiring where andwhen we came from. Our curious eyes look into deep time to understand the history of life. By unearthing and examining fossils, which are traces and petrified remains left behind by prehistoric organisms, paleontology deciphers the biological messages of past organisms written in rocks of different ages and interprets the direct testimony of the changing earth system in the grand dimensions of time and space. Paleontology is the discipline that bridges biology and geology. Fossils were known early in human history, and their meaning was interpreted in various ways by western wisdom and by Chinese naturalists for over 2000 years. Paleontology as a scientific discipline, however, took its shape in the 18th century in Europe and grew quickly during the 19th century. After Charles Darwin published the On the Origin of Species in 1859, paleontology as a school of natural sciences refocused on understanding the evolutionary path of life. Along with developments in geology, biology, and modern technology in the 19th and 20th centuries, the traditional practice of paleontology using morphology, taxonomy, and biochronology evolved into a form that is equipped with multidisciplinary approaches and is technically and methodologically sophisticated. New concepts, theories, andmethods that developed alongwith the appearance and progress of plate tectonics, radiometric dating, stable isotopic studies, and molecular biology, are now blended into the bloodof traditional paleontology. Searching for themechanisms behind the diversification of life, mass extinctions, and the paleoenvironmental background, paleontology has been brought to a new stage in which organisms and their surroundings have become a single multifaceted research subject commonly tackled by joint international teamwork. In such an enriched intellectual atmosphere, on the ground laid by generations of scientists, and chargedwith the energy of a promising economy, paleontology in China has blossomed into a strong basic research enterprise during the last two decades. We have been fortunate to have witnessed and been involved in this unprecedented development. We use this special topic of National Science Review as an opportunity to bring together a collection of essays that briefly highlights some of the most remarkable paleontological work accomplished during the last two decades in China, with the hope that this will encourage greater endeavors in future research. China contains rich and unique fossil resources, such as the Precambrian Weng’an Biota, the early Cambrian Chengjiang Biota, and the Early Cretaceous Jehol Biota, to name but a few. Numerous important fossils, someofwhich are considered to be ‘missing links’ in the chain of organismal evolution, have been discovered in the strata of various geologic time intervals. Research on these fossils has significantly advanced our knowledge of the history of life as a whole.The presentations included in the special topic of this issue encompass a spectrum of subjects: from the evolution of the earliest multicellular organisms to how birds conquered the sky, from the coevolution of parasites and hosts to the origin of flowering plants, from insights into genomes and fossils to the early evolution ofmammals, and from an overview of the Jehol Biota to the largest scale mass extinction on earth, in which death resulted in a new flourishing of life. The focus in most of these articles is on critical transitions in organisms and the earth system over geological time. Because paleontological studies in China are so diverse and publications have poured out at such a rapid pace in recent years, the articles included in this special topic are understandably far from being comprehensive. Discoveries are forever, and our efforts to search for the history of life are endless. What has been achieved in paleontology in China is undoubtedly superb, but it is only the opening statement of an influential speech; much remains to be said in the decades to come.The great potential for research opportunities needs to be cultivated and numerous scientific problems remain to be solved. Looking into the history of life, we see a bright future for the study of paleontology in China and the rest of the world. Finally, we thank all the contributors, reviewers, and editorial staff for their time and dedication that made this special topic possible.