Plankton Dynamics Research Articles

Light attenuation parameterization in a highly turbid mega estuary and its impact on the coastal planktonic ecosystem

Light is essential for phytoplankton photosynthesis and many other biogeochemical processes in the aquatic system. However, light regimes vary greatly in the estuaries and coasts due to the optical complexity of the Case-2 waters. In this study, observed vertical profiles of photosynthetically active radiation (PAR; 400-700 nm) in a highly turbid mega estuary, the Changjiang (Yangtze River) Estuary, are used to quantify the effects of sedimentary and biogeochemical components on PAR attenuation in the water column and associated ecological impacts. The in-situ data suggest suspended sediment plays the most crucial role in light diffuse attenuation coefficient (Kd) distribution, followed by salinity (i.e., an index for colored dissolved organic matter) and phytoplankton chlorophyll-a. A new parameterization of Kd, based on suspended sediment, chlorophyll-a concentration, and salinity, is fitted using multiple linear regression. The previous and new Kd parameterizations are further applied to a coupled hydrodynamics-sediment-ecosystem model to simulate spring phytoplankton blooms. Comparative model runs reveal that the new Kd parameterization resulted in a better representation of the spring bloom patterns in magnitude, horizontal distribution, and vertical thickness of the high chlorophyll-a band offshore the turbidity maximum zone during the spring bloom. In summary, accurate representations of underwater light fields in the optically complex Case-2 water are critical in understanding biophysical processes that control planktonic ecosystem dynamics in the estuaries and coastal seas.

Impact of ageostrophic dynamics on the predictability of Lagrangian trajectories in surface-ocean turbulence

Turbulent flows at the surface of the ocean deviate from geostrophic equilibrium on scales smaller than about 10 km. These scales are associated with important vertical transport of active and passive tracers, and should play a prominent role in the heat transport at climate scales and for plankton dynamics. Measuring velocity fields on such small scales is notoriously difficult but new, high-resolution satellite altimetry is starting to reveal them. However, the satellite-derived velocities essentially represent the geostrophic flow component, and the impact of unresolved ageostrophic motions on particle dispersion needs to be understood to properly characterize transport properties. Here, we investigate ocean fine-scale turbulence using a model that represents some of the processes due to ageostrophic dynamics. We take a Lagrangian approach and focus on the predictability of the particle dynamics, comparing trajectories advected by either the full flow or by its geostrophic component only. Our results indicate that, over long times, relative dispersion is marginally affected after filtering out the ageostrophic component. Nevertheless, advection by the geostrophic-only flow leads to an overestimation of the typical pair-separation rate, and to a bias on trajectories (in terms of displacement from the actual ones), whose importance grows with the Rossby number. We further explore the intensity of the transient particle clustering induced by ageostrophic motions and find that it can be significant, even for small flow compressibility. Indeed, we show that clustering is here due to the interplay between compressibility and persistent flow structures that trap particles, enhancing their aggregation. Published by the American Physical Society 2024

Exploring bistable plankton dynamics: stochastic model analysis by SSF techniques

Exploring bistable plankton dynamics: stochastic model analysis by SSF techniques

Satellite-Based Detection of Algal Blooms in Large Alpine Lake Sevan: Can Satellite Data Overcome the Unavoidable Limitations in Field Observations?

Lake Sevan in Armenia is a unique, large, alpine lake given its surface, volume, and geographic location. The lake suffered from progressing eutrophication and, since 2018, massive cyanobacterial blooms repeatedly occurred. Although the lake is comparatively intensely monitored, the feasibility to reliably detect the algal bloom events appeared to be limited by the established in situ monitoring, mostly because algal bloom dynamics are far more dynamic than the realized monitoring frequency of monthly samplings. This mismatch of monitoring frequency and ecosystem dynamics is a notorious problem in lakes, where plankton dynamics often work at relatively short time scales. Satellite-based monitoring with higher overpass frequency, e.g., by Sentinel-3 OLCI with its daily overcasts, are expected to fill this gap. The goal of our study was therefore the establishment of a fast detection of algal blooms in Lake Sevan that operates at the time scale of days instead of months. We found that algal bloom detection in Lake Sevan failed, however, when it was only based on chlorophyll due to complications with optical water properties and atmospheric corrections. Instead, we obtained good results when true-color RGB images were analyzed or a specifically designed satellite-based HAB indicator was applied. These methods provide reliable and very fast bloom detection at a scale of days. At the same time, our results indicated that there are still considerable limitations for the use of remote sensing when it comes to a fully quantitative assessment of algal dynamics in Lake Sevan. The observations made so far indicate that algal blooms are a regular feature in Lake Sevan and occur almost always when water temperatures surpass approximately 20 °C. Our satellite-based method effectively allowed for bloom detection at short time scales and identified blooms over several years where classical sampling failed to do so, simply because of the unfortunate timing of sampling dates and blooming phases. The extension of classical in situ sampling by satellite-based methods is therefore a step towards a more reliable, faster, and more cost-effective detection of algal blooms in this valuable lake.

Mechanisms regulating trophic transfer in the Humboldt Upwelling System differ across time scales

Abstract The Humboldt Upwelling System hosts a highly productive ecosystem with central importance for global fisheries, yet with strong seasonal and interannual variability in the planktonic base of the food chain ultimately affecting fish yield. Understanding the variability in energy transfer within the plankton community in the contemporary climate can provide valuable insights for future projections of planktonic dynamics. Therefore, we use a regional physical-biogeochemical ocean model simulation (CROCO-BioEBUS) from 1990 to 2010 to investigate the underlying mechanisms of seasonal and interannual variability of the trophic transfer. Our model simulations suggest that, on an interannual scale, variations in trophic transfer are governed by variations in the offshore surface flow that modulate the plankton cross-shore distribution. Weak offshore surface flow, as simulated during the El Niño period, allows the zooplankton to stay relatively close to the shore, leading to more efficient grazing and trophic transfer compared to years with strong offshore flow. This mechanism differs from the seasonal one, where the mixed layer depth is the primary driver of variations in plankton dynamics, including trophic transfer. Our results highlight that mechanisms controlling plankton trophic transfer differ across time scales, and thus stress that extrapolating solely from seasonal findings to understand long-term trophic transfer changes in the context of climate change may be insufficient.

Plankton Resting Stages Distribution in Bottom Sediments along the Confinement Gradient of the Taranto Sea System (Ionian Sea, Southern Italy)

The abundance distribution and species richness of encysted plankton have been investigated in the bottom sediments of the Taranto Marine System (southern Italy) for contributing to the understanding of plankton dynamics in a confined coastal area. This confined area is characterized by four contiguous basins with different degrees of confinement. The investigation was carried out in the fall season with the aim to intercept a period of rich cyst production from the plankton before overwintering. From the analysis of a total of 36 sediment samples, from 12 sample sites, the highest abundance of cysts and species richness were registered in the confined part of the system. A total of 103 cyst morphotypes have been recognized in the whole area, with highest abundances and taxa richness in the most confined stations. These results, suggesting a benthic-pelagic exchange of living matter, more intense in confined environments than in the open sea, highlight the necessity of (i) including the analysis of sediment cyst banks in studies of plankton dynamics, and (ii) to consider the role of confined areas, where the variability of environmental conditions favours a higher planktonic biodiversity in the sediments than in the water column.

Stochastic effects on plankton dynamics: Insights from a realistic 0-dimensional marine biogeochemical model

Marine ecosystems exist in a noisy and uncertain environment, not governed by deterministic laws. The development of ecological communities is significantly influenced by variability, and the interaction between nonlinearity and stochastic processes can lead to phenomena that deterministic models cannot explain. Plankton, forming the base of the marine food web, are highly affected by stochastic fluctuations due to their short reproductive timescales. Investigating the effects of noise on plankton growth is essential for accurately describing and predicting marine health. We present a realistic biogeochemical model where multiplicative white noise represents environmental stochasticity affecting plankton. The model suggests ergodic properties in the presence of stochastic fluctuations, with temporal and ensemble distributions being coherent. Analytical and numerical analyses reveal that, given sufficiently low noise intensity, dynamics near equilibrium resemble an Ornstein-Uhlenbeck additive process. With higher noise intensities, resonance occurs, particularly when endogenous dynamics are periodic. The results indicate that low noise intensity can positively influence plankton persistence with an higher number of species coexisting, while higher noise intensity can establish a new equilibrium in the system.

Temperature-induced copepod depletion and the associated wax of Bellerochea in Belgian coastal waters: Implications and shifts in plankton dynamics

Since 2018, severe and recurrent copepod depletions have been observed in Belgian coastal waters. These depletions have been described as temperature-induced mass mortality events. This paper confirms the relation of copepod abundance anomalies with periods of high temperature based on new data. Although severe, the effects, consequences and implications of this depletion remain unknown. Our study suggests that the absence of zooplanktonic predators in autumn, together with the availability of nutrients discharged via the Scheldt estuary, allowed a bloom of the diatom Bellerochea, in a season otherwise characterised by low phytoplanktonic activity. Although the bloom reaches high abundances, its effects on the marine environment are not yet visible. The enormous abundances are likely to induce small-scale oxygen depletions which might further translate to the environment. Communities of Calanoida, Canuelloida and Cyclopoida tend to recover from the annual autumn depletion, although the typical autumn peak is entirely missing in the years subject to severe heat waves and associated high water temperatures. As a result, copepod dynamics have drastically changed since the first observed depletion and associated bloom of Bellerochea in 2018.

Climate change impacts on a sedimentary coast—a regional synthesis from genes to ecosystems

Climate change effects on coastal ecosystems vary on large spatial scales, but can also be highly site dependent at the regional level. The Wadden Sea in the south-eastern North Sea is warming faster than many other temperate coastal areas, with surface seawater temperature increasing by almost 2 °C over the last 60 years, nearly double the global ocean mean increase. Climate warming is accompanied by rising sea levels, which have increased by approximately 2 mm yr−1 over the last 120 years. For this sedimentary coast, the predicted acceleration of sea-level rise will have profound effects on tidal dynamics and bathymetry in the area. This paper synthesises studies of the effects of ocean warming and sea level rise in the northern Wadden Sea, largely based on research conducted at the Wadden Sea Station Sylt of the Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research. An increasing rate of sea level rise above a critical threshold will lead to coastal erosion and changes in sediment composition, and may cause the transition from a tidal to lagoon-like environment as tidal flats submerge. This involves changes to coastal morphology, and the decline of important habitats such as muddy tidal flats, salt marshes and seagrass meadows, as well as their ecological services (e.g. carbon sequestration). Ocean warming affects plankton dynamics and phenology, as well as benthic community structure by hampering cold-adapted but facilitating warm-adapted species. The latter consist mostly of introduced non-native species originating from warmer coasts, with some epibenthic species acting as ecosystem engineers that create novel habitats on the tidal flats. Warming also changes interactions between species by decoupling existing predator–prey dynamics, as well as forming new interactions in which mass mortalities caused by parasites and pathogens can play an understudied but essential role. However, Wadden Sea organisms can adapt to changing abiotic and biotic parameters via genetic adaptation and phenotypic plasticity, which can also be inherited across generations (transgenerational plasticity), enabling faster plastic responses to future conditions. Important research advances have been made using next-generation molecular tools (-omics), mesocosm experiments simulating future climate scenarios, modelling approaches (ecological network analysis), and internet-based technologies for data collection and archiving. By synthesising these climate change impacts on multiple levels of physical and biological organisation in the northern Wadden Sea, we reveal knowledge gaps that need to be addressed by future investigations and comparative studies in other regions in order to implement management, mitigation and restoration strategies to preserve the uniqueness of this ecosystem of global importance.

Seasonal metabolic dynamics of microeukaryotic plankton: a year-long metatranscriptomic study in a temperate sea.

Ecosystem composition and metabolic functions of temperate marine microeukaryote plankton are strongly influenced by seasonal dynamics. Although monitoring of species composition of microeukaryotes has expanded recently, few methods also contain seasonally resolved information on ecosystem functioning. We generated a year-long spatially resolved metatranscriptomic data set to assess seasonal dynamics of microeukaryote species and their associated metabolic functions in the Southern Bight of the North Sea. Our study underscores the potential of metatranscriptomics as a powerful tool for advancing our understanding of marine ecosystem functionality and resilience in response to environmental changes, emphasizing its potential in continuous marine ecosystem monitoring to enhance our ecological understanding of the ocean's eukaryotic microbiome.

Response of hydrodynamic and physico-chemical conditions to engineered forcing in an enclosed bay

Marine causeways are becoming more common in many coastal regions to improve vehicular transportation and social integration across landscapes segmented by bays and estuaries. The construction of barrier-type structures has profound implications by altering the geomorphological, hydrodynamic, and ecological conditions in the coastal marine environment. This study investigates the impact of one such newly constructed marine causeway in an enclosed bay in the Arabian Gulf. We hypothesized that the underwater structure of the bridge affects hydrodynamic and physicochemical conditions in the bay. Through extensive physicochemical monitoring, we found that the bridge acted as a physical barrier diminishing tidal currents, thereby resulting in decreased water exchange and heightened stagnation within the bay. Consequently, environmental gradients intensified and nutrient dynamics altered across the bridge. This will have implications for the plankton dynamics, ecosystem function, and overall health of the bay and its surrounding waters. Based on these results, it is recommended to increase efforts to mitigate the stagnation in the bay. Additionally, future coastal development needs to avoid further compromising the water exchange ability of the bay. Our findings also highlight the importance of continuous monitoring and adaptive management strategies to mitigate the environmental impacts of such developments.

Diagnosis of planktonic trophic network dynamics with sharp qualitative changes

Diagnosis of planktonic trophic network dynamics with sharp qualitative changes

DINAMIKA HARIAN PLANKTON DI TELUK PANGPANG BLOK JATI PAPAK TAMAN NASIOAL ALAS PURWO

National Park Alas purwo is one the conservation areas have a fairly extensive mangrove forest and one of them is the area Bay Pangpang Blok Jati Papak. Mangrove forest have many functions that many marine organisms that occupy the regions one of the region one of which is plankton. Plankton are organisms that are generally relatively small size and its movement depends on the direction of water flow. Plankton are organisms that are generally relatively small size and its movement depends on the direction of water flow. This study aims to determine the abundance and dynamics of plankton daily in at Bay Pangpang Block Jati Papak Nasional Park Alas Purwo. This study was conducted in May-June, 2016. The method used in this research is purposive sampling to determine the point where the (station), and sampling performed every 2 hours over a period of 24 hours. Abiotic parameters include measurements temperature, pH and light penetration. The research found that 13 spec Nitzchia sp, Oedogonium sp, Vaucheria sp, Eretmocaris, Dracia moluska, Amfipod, Micracia, Glaucothoe peroni, Candacia truncata, Candacia curta, Subbeucalamus crassus, Candacia bradi dan Undinula vulgaris. The highest abundanc species of phytoplankton that Nitzchia sp, while the highest abundance of zooplankton that is Candacia truncata species. The highest dynamics of plankton occurs at the time of sampling 07.00 dean in the number of species found are 7 to fotoplankton species and 16 species of zooplankton.

Induced spawning, larval rearing, and innate diet analysis of Indian black clam, Villorita cyprinoides: An alternative to resource restoration through aquaculture

Villorita cyprinoides (Gray, 1825) also called the Indian black clam is a native species from the Indian peninsula directly related to the livelihood of many beneficiaries. The wild population of this Cyrenid clam is confronted with substantial challenges, including various climatic stressors and anthropogenic pressures such as overfishing and habitat destruction. A balance between capture fisheries and aquaculture through the development of hatchery technology is inevitable for ensuring the sustainable use of resources. The declining population of V. cyprinoides underscores the urgency of standardizing breeding protocols and implementing proper farming practices to foster a sustainable black clam fishery, given that Villorita is a potential candidate species for aquaculture. This paper describes the first successful induced spawning of the clam with successful rearing of larvae up to the umboned veliger stage and evaluates the efficacy of induced spawning through combined physical and chemical stimuli. Furthermore, our study employs eDNA metabarcoding to analyze plankton dynamics in waters from native clam beds. This sheds light on the potential microalgal dietary preferences of the species, which can be valuable in preparing diets for larval development and aquaculture in the future.

Under ice plankton and lipid dynamics in a subarctic lake.

Climate warming causes shorter winters and changes in ice and snow cover in subarctic lakes, highlighting the need to better understand under-ice ecosystem functioning. The plankton community in a subarctic, oligotrophic lake was studied throughout the ice-covered season, focusing on lipid dynamics and life history traits in two actively overwintering copepods, Cyclops scutifer and Eudiaptomus graciloides. Whereas C. scutifer was overwintering in C-IV to C-V stage, E. graciloides reproduced under ice cover. Both species had accumulated lipids prior to ice-on and showed a substantial decrease in total lipid content throughout the ice-covered period: E. graciloides (60%-38% dw) and C. scutifer (73%-33% dw). Polyunsaturated fatty acids of algal origin were highest in E. graciloides and declined strongly in both species. Stearidonic acid (18:4n-3) content in E. graciloides was particularly high and decreased rapidly during the study period by 50%, probably due to reproduction. The copepods differed in feeding behavior, with the omnivore C. scutifer continuing to accumulate lipids until January, whereas the herbivorous E. graciloides accumulated lipids from under-ice primary production during the last months of ice-cover. Our findings emphasize the importance of lipid accumulation and utilization for actively overwintering copepods irrespective of the timing of their reproduction.

Chitinozoan response to the ‘Kellwasser events’: population dynamics and morphological deformities across the Frasnian–Famennian mass extinction

AbstractFossil (zoo)plankton dynamics during Devonian ocean‐anoxic and extinction events can shed light on the palaeoceanographic and geochemical processes that shaped the middle Palaeozoic biosphere. However, datasets on (Upper) Devonian marine palynology, illustrating such dynamics, remain underexplored. The type section of the Sweetland Creek Shale in Iowa (USA) offers a detailed conodont zonation for the upper Frasnian and across the Frasnian–Famennian boundary, records the Upper and Lower Kellwasser events and has pristine preservation of organic material, making this an ideal section to study the effects of this catastrophic event on chitinozoan zooplankton populations. A total of 3998 specimens were recovered, imaged and classified into 12 distinct species, 10 of which were previously unknown. This study demonstrates the unrealized potential of chitinozoans as a regional biostratigraphic tool in the Upper Devonian. The Lower Kellwasser Event is characterized by a drop in chitinozoan abundance and the run up to the Upper Kellwasser Event marks a period of rapid species turnover rates. Interestingly, every assemblage in this interval is nearly monospecific. Patterns of changing spine morphologies in Fungochitina pilosa, Ramochitina sp. A and Saharochitina sp. A are herein explored as potential ecophenotypic expressions. We identify Angochitina monstrosa as a new disaster species. The discovery of two teratological chitinozoans specimens, in combination with the presence of the disaster species Angochitina monstrosa and deformation in contemporaneous conodonts, supports our previous discovery that marine teratology is a feature of many Palaeozoic extinction events, possibly triggered by the injection of hydrothermal brines into the ocean.

DNA metabarcoding as a tool for characterising the spatio-temporal distribution of planktonic larvae in the phylum Echinodermata

AbstractMetabarcoding is revolutionising the analysis of biodiversity in marine ecosystems, especially as it provides a means of detecting and identifying cryptic life stages in field samples. The planktonic larval stage of many species underpins the abundance and distribution of adult populations but is challenging to characterise given the small size of larvae and diffuse distributions in pelagic waters. Yet, planktonic larval dynamics are key to understanding phenomena observed in adult populations, such as the boom-and-bust dynamics exhibited by some echinoderms. Rapid changes in echinoderm population density can have significant effects on local benthic ecosystems. For example, outbreaks of the crown-of-thorns sea star (CoTS) on the Great Barrier Reef (GBR) have led to considerable declines in coral cover. Here, we used a DNA metabarcoding approach to investigate the spatio-temporal distribution and diversity of echinoderm larvae on the GBR, including CoTS. Generalised linear mixed models revealed that echinoderm larval richness, was significantly correlated with temporal variables (i.e. season and year) which is consistent with expected fluctuations in larval output based on adult spawning periodicity. However, neither site-specific differences in echinoderm larval richness, nor correlations between larval composition and environmental, temporal, or spatial variables were found. This study validates the utility of metabarcoding approaches for detecting and characterising echinoderm larvae, including CoTS, which could prove useful to future monitoring efforts. Our findings suggest that metabarcoding can be used to better understand the life history of planktonic larvae, and analyses combining environmental (e.g., temperature, nutrients) and oceanographic (e.g., currents) data could deliver valuable information on the factors influencing their spatio-temporal distributions.

Effects of hypoxia on copepod egg hatching success: An in situ study

Hypoxia is a global concern, affecting marine ecosystems. In this study, we investigated the effect of low Oxygen concentration on the egg hatching rate of Acartia erythraea in Gamak Bay, where hypoxia frequently occurs in summer. Three in situ experiments were conducted in June and August 2013 and July 2014. Environmental parameters, including the water temperature, salinity, dissolved Oxygen (DO) concentration, and pH, were measured during the experiments. Hypoxic conditions had a significant negative impact on the hatching rate of A. erythraea eggs; hatching rate was positively correlated with the DO concentration (r = 0.843, p < 0.01) and pH (r = 0.600, p < 0.01). These findings suggest that hypoxia has significant negative impacts on recruitment of planktonic A. erythraea, with potential implications for overall plankton and nekton dynamics.

Interactions between Noctiluca scintillans and Three Co-Occurring Microalgae in Response to Varying Nutrient Levels

The dinoflagellate Noctiluca scintillans is a globally distributed bloom-forming species. Previous studies have shown that the primary reason for the frequent occurrence of N. scintillans blooms may be the proliferation of microalgae due to eutrophication, which provides a sufficient source of food. Meanwhile, N. scintillans may release nutrients into the environment, thus affecting the population dynamics of microalgae. Thus, to investigate the interaction between N. scintillans and co-occurring microalgae, this study examined the population dynamics of N. scintillans and their interaction with three representative microalgae species in response to varying nutrient levels. The findings indicate that the growth of N. scintillans is slow when co-cultured with diatom Skeletonema costatum. Moreover, a high density and rapid growth rate of S. costatum may have an inhibitory effect on the growth of N. scintillans. Conversely, the population abundance of N. scintillans increased with the rise in the population density and nutritional level of Heterocapsa steinii (dinoflagellate) and Heterosigma akashiwo (raphidophyceae). Notably, N. scintillans can discharge specific nutrients into the aquatic environment, which can subsequently be assimilated and exploited by H. steinii. Thus, the interaction between the species and population dynamics of plankton, as well as changes in nutrient levels within the ecosystem, played a significant role in influencing the growth and population dynamics of N. scintillans. The mutualistic association between N. scintillans and microalgae may establish a transient closed loop, thereby fostering the sustained proliferation and subsequent expansion of N. scintillans.

Effects of physical forcing on short-term plankton dynamics in a narrow coral reef lagoon (Ouano, New Caledonia): a two-week high-frequency study

Abstract The response of plankton communities to short-term climatic events was studied in a narrow coral reef lagoon representative of the channel-type lagoons of the high islands of the tropical Pacific. Phyto- and zooplankton data (abundance and taxonomic composition) were sampled at high frequencies for 2 weeks in April–May 2017 under various tidal conditions and combined with environmental and physical measurements and modeling hydrodynamic products. The short-term external events (wind, waves and rain) that occurred caused changes in the circulation patterns and increased nutrient concentrations in the lagoon. The plankton reacted quickly to this enrichment, with an increase in chlorophyll a and the rapid development of a microphytoplankton community dominated by diatoms, and of opportunistic herbivorous zooplankton (tintinnids, appendicularians). Zooplankton composition and distribution were strongly modulated by the circulation patterns through advection and mixing. Our results show that the tidal and diel components of the temporal variability of planktonic groups were blurred by sporadic event components (i.e. wind, wave and rainfall events). Environmental and biological responses to these external physical forcings occurred at lagoon scale in this channel-like lagoon, unlike what is observed in larger lagoons (such as the southern lagoons of New Caledonia) where spatial variability is much higher.