Kelp is one of the most important primary producers in the coastal oceans. When it matures or begins to decay, a substantial amount of detritus sinks and is degraded by microorganisms. However, the fate of these detritus after long-term microbial degradation, which is closely related to their ultimate carbon sequestration function, is not yet clear. Here, by studying the long-term (210-day) microbial degradation dynamics of kelp detritus, we reveal that the bioavailable components of kelp detritus (when kept in the dark) persisted for over four months. This left a considerable amount (in total, ca. 8.85%) of different forms of stable carbon that could function in long-term carbon sequestration. Among them, recalcitrant dissolved organic carbon (RDOC), recalcitrant particulate organic carbon, dissolved inorganic carbon, particulate inorganic carbon, and residual large particulate carbon accounted for 1.27%, 0.12%, 6.00%, 0.04%, and 1.41% of the initial kelp detrital carbon, respectively. The remaining organic carbon resisted further degradation due to the high content of humic-like substances, polycyclic aromatics, and highly aromatic compounds. Microbial community structure showed obvious successional characteristics during the long-term degradation process, driving the gradual transformation of the detritus-derived organic carbon from labile to recalcitrant. Notably, microbial transformation of the bioavailable components of kelp detritus contributed 28.7% of the remaining RDOC molecular species. This study provides novel insights into the contribution of the microbial-mediated degradation of kelp detritus to different forms of carbon sequestration.