Double Bond Character Research Articles

Protonated oxalyl chloride and the ClCO+ cation.

The reactions of oxalyl chloride were investigated in the binary superacidic systems HF/SbF5 and DF/SbF5. O-Monoprotonated oxalyl chloride was isolated and represents the first example of a protonated acyl chloride. Diprotonated oxalyl chloride is only stable in solution. Salts of the ClCO+ cation were synthesized from the reactions of oxalyl chloride or COClF with SbF5 in 1,1,1,2-tetrafluoroethane (R-134a, CF3CFH2). The colourless salts were characterized by low-temperature vibrational spectroscopy, NMR spectroscopy and single-crystal X-ray diffraction. (1,2-Dichloro-2-oxoethylidene)oxidanium hexafluoridoantimonate(V), [C2O(OH)Cl2][SbF6], crystallizes in the monoclinic space group P21 and carbonyl chloride hexadecafluoridotriarsenate(V) [ClCO][Sb3F16], in the trigonal space group P31, with two and three formula units per unit cell, respectively. Monoprotonated oxalyl chloride and the ClCO+ cation both display very short C-Cl bonds with a strong double-bond character.

Insights into Chemical Bonding Modes and Heat Transport at the Molecular Level.

Despite the demand for nanoscale thermal management technologies of material surfaces and interfaces using organic molecules, heat transport properties at the single molecular level remain elusive due to the experimental difficulty of measuring temperature at the nanoscopic scale. Here we show how chemical bonding modes can affect the heat transport properties of single molecules. We focused on four molecular systems: benzylthiol linked to another phenyl group by either a triple (compound 1), double (3), or amide (4) bond and a common linear alkanethiol (2), all of which are nearly identical in molecular length. We prepared binary self-assembled monolayers (SAMs) using 1 as a common reference in combination with 2-4 and investigated their relative heat transport properties using scanning thermal microscopy (SThM). Two-dimensional temperature mapping of the binary SAMs showed that C≡C and C=C bonds provide more effective pathways for heat transport compared to C-C bonds. Since the amide molecule has resonance structures with C=N double bond character, we expected that its heat transport properties would be comparable to those of the thiols containing triple or double bonds. However, the heat transport properties of this molecule prevailed over the others, most likely due to the formation of additional heat transport pathways caused by intermolecular hydrogen bonding. These findings may provide important guidelines for the design of organic materials for nanoscale thermal management.

Efficient Visible‐Light‐Induced π‐Extension of Perylene Tetraesters: An Investigation on Regioselectivity

AbstractThe present study discloses a highly efficient visible‐light‐induced π‐extension of perylene tetraesters and discussion on the regioselectivity in the photocyclization. We initially found that π‐extension reaction of 3,4‐dimethoxyphenyl perylene tetraester smoothly proceeded by only irradiating blue LED with a complete regioselectivity. Investigations of the photocyclization with various substrates revealed the relationship between the regioselectivity and electron‐donating/withdrawing effects of the substituents on the aromatic groups. Moreover, theoretical investigation suggested the importance of bond alteration in the aromatic groups: cyclization proceeds preferentially at shorter C−C bonds with higher double bond characters. The findings will open new possibilities for the practical synthesis of custom‐designed π‐extended perylene materials.

Isolable Si=B Analogue of a Vinyl Halide: A Building Block for Facile Access toward Silicon‐Boron Multiple Bonded Species

AbstractCompared to the outstanding development in the synthesis of Si−B single bonded species, borylsilanes and their application to organic synthesis, the chemistry of Si=B double bonded species, borasilenes and boratasilenes have only made little progress, first of all, due to the difficulties in accessing such double bonds. Herein we report the synthesis of the first Si=B analogue of a vinyl halide, a bromoboratasilene, via formal borylene insertion to the coordination sphere of a monoatomic Si(0) complex, using a dihaloborane as the borylene source. The treatment of bromoboratasilene toward neutral or anionic Lewis bases gives access to new boratasilenes, all of which were proved to possess significant Si=B double bond character by XRD analysis and DFT calculations. These results demonstrate exciting strategies to synthesize new types of Si=B double bonded species which should further progress the chemistry of boron, silicon‐containing molecules.

Isolable Si=B Analogue of a Vinyl Halide: A Building Block for Facile Access toward Silicon-Boron Multiple Bonded Species.

Compared to the outstanding development in the synthesis of Si-B single bonded species, borylsilanes and their application to organic synthesis, the chemistry of Si=B double bonded species, borasilenes and boratasilenes have only made little progress, first of all, due to the difficulties in accessing such double bonds. Herein we report the synthesis of the first Si=B analogue of a vinyl halide, a bromoboratasilene, via formal borylene insertion to the coordination sphere of a monoatomic Si(0) complex, using a dihaloborane as the borylene source. The treatment of bromoboratasilene toward neutral or anionic Lewis bases gives access to new boratasilenes, all of which were proved to possess significant Si=B double bond character by XRD analysis and DFT calculations. These results demonstrate exciting strategies to synthesize new types of Si=B double bonded species which should further progress the chemistry of boron, silicon-containing molecules.

Imino(dialkylamino)isoindolines: Structures and dynamic behavior

In 1956, Elvidge and coworkers investigated the synthesis of a series of isoindoline compounds derived from phthalonitrile. They produced a series of secondary amine-modified isoindolines known as the imino(dialkylamino)isoindolines, and in this report, we revisit this chemistry. In addition to confirming the previously observed reactivity, we structurally characterized three examples and observed a double bond character between the isoindoline carbon atom and the secondary nitrogen atom position. This results in a rotational barrier about this bond, which we observed by NMR spectroscopy and probed using computational methods. The barriers are comparable to those seen in bis-substituted amides.

Bonding and Reactivity of d0 Transition Metal Imido Complexes Encoded in Their 15N NMR Signatures.

Terminal imido complexes containing metal-nitrogen multiple bonds have been widely used in organometallic chemistry and homogeneous catalysis. The role of terminal imido ligands spans from reactive sites to spectator motifs, largely depending on the nature of the metal center and its specific coordination sphere. Aiming at identifying reactivity descriptors for M-N multiple bonds, we herein explore solid-state 15N NMR spectroscopy (ssNMR) on early transition metal terminal imido complexes augmented by computational studies and show that the asymmetry parameter, κ (skew, 1 ≥ κ ≥ -1), readily available from experiments or calculations, is diagnostic for the reactivity of M-N multiple bonds in imido complexes. While inert imido ligands exhibit skew values (κ) close to 1, highly reactive imido moieties display significantly lower skew values (κ ≪ 1) as found in metallocene or bis-imido complexes. Natural chemical shielding analysis shows that skew values away from 1 are associated with an asymmetric development of π-orbitals around the M-N multiple bond of the imido moiety, with a larger double-bond character for reactive imido. Notably, this descriptor does not directly relate to the M-N-C bond angle, illustrating the shortcoming of evaluating bonding and hybridization from geometrical parameters alone. Overall, this descriptor enables to obtain direct experimental evidence for the π-loading effect seen in bis(imido) and related complexes, thus explaining their bonding/reactivity.

A Simple Manganese(I) Catalyst for the Efficient and Selective Hydrophosphination of Olefins with PH3, Primary, and Secondary Phosphanes.

A tridentate ligand L with a P,NH,N donor motif was synthesized in few steps from commercially available precursors. Upon reaction with [MnBr(CO)5], an octahedral 18-electron complex [Mn(CO)3(L)]Br (1) is obtained in which L adopts a facial arrangement. After deprotonation of the NH group in the cationic complex unit, a neutral Mn(I) amido complex [Mn(CO)2(L-H)] (2) is formed under loss of CO. Rearrangement of L-H leads to a trigonal bipyramidal structure in which the P and N donor centers are in trans position. Further deprotonation of 2 results in a dep-blue anionic complex fragment [Mn(CO)2(L-2H)]- (3). DFT calculations and a QTAIM analysis show that the amido complex 2 contains a Mn-N bond with partial double bond character and 3 an aromatic MnN2C2 ring. The anion [Mn(CO)2(L-2H)]- reacts with Ph2PH to give a phosphido complex, which serves as phosphide transfer reagent to activated olefins. But the catalytic activity is low. However, the neutral amido complex 2 is an excellent catalyst and with loadings as low as 0.04 mol %, turn over frequencies of >40'000 h-1 can be achieved. Furthermore, secondary and primary alkyl phosphines as well as PH3 can be added in a catalytic hydrophosphination reaction to a wide range of activated olefins such as α,β-unsaturated aldehydes, ketones, esters, and nitriles. But also, vinyl pyridine and some styrene derivatives are converted into the corresponding phosphanes.

A plant cyclic nonapeptide of orbitide type: an electron density study

Abstract The electron density distribution (EDD) of a plant cyclic nonapeptide of orbitide type was studied. Crystal X-ray diffraction data was obtained from the Cambridge Structural Database (CSD) and refitted using scattering factors of the invariom library, thereby providing aspherical electron density. Bond topological, atomic properties and molecular surfaces (electrostatic potential and Hirshfeld surfaces) were derived. The partial double bond character of the peptide bond was confirmed by the ellipticity ε = 0.25. For eight N–H⋯O hydrogen bonds, atomic charges of contributing atoms differ depending on the type of the accepting oxygen atom. Atomic charge differences between negative main and positive side chains of this nonapeptide result in characteristic features of the electrostatic potential, which shows a positive isosurface around the molecule leading to repulsive interactions in the solid state structure. Weak intermolecular interactions are indicated by insignificant ED concentrations on the Hirshfeld surface except for weak signals at sites of intermolecular N–H⋯O and C–H⋯O hydrogen bonds.

Synthesis and reactivity of a dialkyl‐2H‐1,2‐phosphasiliren‐3‐olate

AbstractA heterocycle containing phosphorus, known as dialkyl‐2H‐1,2‐phosphasiliren‐3‐olate 2, is synthesized through the reaction of dialkylsilylene 1 and sodium phosphaethynolate (NaOCP) in a high yield at ambient conditions. The structure of 2 is determined by single‐crystal X‐ray diffraction and multinuclear NMR spectroscopy. The theoretical studies are identified two nucleophilic centres located on the phosphorus (P) and oxygen (O) atoms, respectively. According to WBIs and the crystal characterization analyses, both the C−P and C−O bonds in the C−Si‐P three‐membered ring have significant double bond character. Reactions involving R3SiCl and Me2SO4 with 2 at room temperature are also conducted at room temperature. The nucleophilic substitution reaction can also occur on oxygen atom of 2, and yield ring‐retaining products 3 and 4 a–4 c, respectively. When acyl chlorides are employed as electrophiles, the derivatives of (silylmethylidyne)phosphane, 6 a–6 c, are produced as a result of the substitution of the oxygen atom.

The bonding situations in ruthenium chalcogenonitrosyl compounds: a physical reasoning.

This research presents, for the first time, a comprehensive and rigorous investigation of ruthenium(II) chalcogenonitrosyl bonding situations in two sets of coordination compounds: [Ru(NE)Cl2(LOEt)] (1a-4a) and [Ru(NE)Cl2(LOEt)]- (1b-4b), where E = O, S, Se, Te. Prior to and following the one-electron reduction, the Ru-NE bonding situations were subjected to analysis. The calculated geometric parameters indicate that both the Ru-NE and N-E bond lengths are susceptible to variation depending on the nature of the chalcogen employed. Furthermore, the results demonstrate that the one-electron reduction process serves to diminish the NE double bond character. The generalized Kohn-Sham energy decomposition analysis (GKS-EDA) was conducted to illustrate the Ru-NE bonding scenarios prior to and following the one-electron reduction. The results provide valuable insights into the nature of Ru(II)-NE (E = O, S, Se, Te) bonds, the influence of chalcogens on ruthenium compounds, as well as how the one-electron reduction affects the release of NE groups. The main findings indicate that the total interaction energy, prior to the one-electron reduction, is three to four times more stabilizing than in the reduced analogs, confirming that the reduction unequivocally enhances the lability of the Ru-NE bond even when heavier chalcogen analogues are employed.

The Challenging World of Simple Inorganic Rings: Revisiting Roesky's Ketone and Roesky's Sulfoxide.

The surprising differences between the experimental solid-state and calculated gas-phase structures of 5-oxo-1,3,2,4-dithiadiazole (Roesky's ketone, 1) and 1-oxo-1,2,4,3,5-trithiadiazole (Roesky's sulfoxide, 2), identified and studied in a series of papers published between 2004 and 2010 but then never satisfactorily explained, have been revisited, making use of the more advanced computational possibilities currently available. The previous calculations' considerable overestimations of the C-S and S-S bond lengths in 1 and 2, respectively, have been partly explained based on the results of periodic calculations and the application of Valence Bond (VB) Theory. In the case of 1, the crystal environment appears to stabilize a structure with a highly polarized C=O bond, which features a C-S bond with considerable double-bond character - an effect which does not exist for the isolated molecule - explaining the much shorter bond in the solid state. For 2, a similar conclusion can be drawn for the S-S distance. For both compounds, though, packing effects are not the sole source of the differences: the inability of Density Functional Theory (DFT) to properly deal with the electronic structures of these apparently simple main-group systems remains a contributing factor.

Iminoboranes With Parent B=NH Entity: Imino Group Metathesis, Nucleophilic Reactivity and N-N Coupling.

While R2 C=N-R double bonds in organic imines are well established, the related iminoboranes R-B=N-R are either prone to oligomerization or can only be stabilized at sufficient steric congestion. In particular, the examples of unsubstituted parent B=N-H entity are rare. We demonstrate that the amino imidazoline-2-imine ligand system (HAmIm) not only gives rise to the isolation of a parent (AmIm)B=N-H iminoborane, but also to species of type (AmIm)B=N-SiMe3 with concomitant stabilization by lithium bromide. The double bond character in these systems is unambiguously corroborated by DFT calculations. The steric accessibility of the (AmIm)B=NH unit allows facile reactivity including metathesis reactions with C=O and C=S bonds, nucleophilic addition toward organic and organometallic carbonyl compounds, but also oxidative N-N coupling within a dimeric unit. Thus, the chemical behavior of the (AmIm)B=N-H and (AmIm)B=N-SiMe3 is distinctly different from that of organic imines.

Planar hexacoordinate phosphorous and arsenic

Here the first planar hexacoordinate phosphorous and arsenic (phP and phAs) atoms are reported. Neutral 18 valence electron EBe3Li3H6 clusters (E = P, As) adopt planar D3h symmetry in their lowest energy singlet state. Chemical bonding reveals partial double bond character in P(As)-Be bonds and single bond character in P(As)-Li bonds. Born-Oppenheimer molecular dynamics simulation as well as their reluctance towards decomposition reveals high kinetic stability of these clusters.

Anions featuring an aluminium-silicon core with alumanyl silanide and aluminata-silene characteristics.

Molecular species containing multiple bonds to aluminium have long been challenging synthetic targets. Despite recent landmark discoveries in this area, heterodinuclear Al-E multiple bonds (where E is a group-14 element) have remained rare and limited to highly polarized π-interactions (Al=E ↔ +Al-E-). Here we report the isolation of three alumanyl silanide anions that feature an Al-Si core stabilized by bulky substituents and a Si-Na interaction. Single-crystal X-ray diffraction studies, spectroscopic analysis and density functional theory calculations show that the Al-Si interaction possesses partial double bond character. Preliminary reactivity studies support this description of the compounds through two resonance structures: one that displays a predominant nucleophilic character of the sodium-coordinated silicon centre in the Al-Si core, as shown by silanide-like reactivity towards halosilane electrophiles and the CH-insertion of phenylacetylene. Moreover, we report an alumanyl silanide with a sequestered sodium cation. Cleavage of the Si-Na bond by [2.2.2]cryptand increases the double bond character of the Al-Si core to produce an anion with high aluminata-silene (-Al=Si) character.

Selective control of donor-acceptor Stenhouse adduct populations with non-selective stimuli

Selective control of donor-acceptor Stenhouse adduct populations with non-selective stimuli

In Silico Activation of CO2, NO2, and SO2 with Light Atom Molecules and Stepwise Conversion of CO2 into Methanol and Water

AbstractCO2, NO2, and SO2 can be activated in silico with tailor‐made light atom tripodal ligand systems carrying particular numbers of Lewis acidic and basic sites in specific relative orientations. In the calculated EO2‐adducts (E=C, N, S), considerable E−O bond elongations of 0.1–0.3 Å, decreasing the E=O double bond character, and O−E−O angle alterations, approaching tetrahedral geometry, activate the donor acceptor complexes towards reduction with BH4−. The lone pairs of the P atoms thereby serve as donors towards the central element, C, N, or S, whereas the electron deficient B atoms serve as acceptors. The charge redistribution within the EO2 complex was monitored by a variety of DFT‐derived real‐space bonding indicators (RSBIs) including bond topologies, non‐covalent contact patches, and electron pair basins. For one CO2‐complex, the reduction towards methanol and water was conducted via stepwise addition of H− and H+. The most critical steps are the initial CO2 uptake due to potential quenching of the ligand systems in their active state, increasing the kinetic barrier, and the release of methanol and water from the ligand system due to potential ligand poisoning. Unbeneficial side reactions in the stepwise reduction and protonation have to be considered.

Structure and Additive-free Transamidation of Planar N-Cyano Amides

Although transamidation of amides generally requires metals, additives, or harsh conditions, we present here a facile transamidation of N-cyano amides with various amines at ambient temperature without any additive. N-cyano amides preferred the trans conformation and have a reduced double bond character revealed by crystal analysis. The DFT study indicates that the transamidation reaction proceeds through the direct attack of amine on the amide carbonyl since the LUMO (or LUMO+1) is located at the carbonyl moiety.

Synthesis, Structures, and Photophysical Properties of Zigzag BNBNB-Embedded Anthracene-Fused Fluoranthene.

Three zigzag BNBNB-embedded anthracene-fused fluoranthenes are synthesized from 1,3,2-benzodiazaboroles through an indole-type N-directed C-H borylation reaction. Single-crystal X-ray diffraction analyses confirm the double bond character of all four alternating B-N bonds and reveal the five-center four-π-electron nature of the BNBNB group. Experimental spectra and density functional theory calculations indicate that borylation remarkably enhances the planarity, extends π-conjugation, and leads to a bathochromic shift in the absorption and emission bands, with remarkable fluorescence quantum yields in solution (92%).

Design, synthesis, spectroscopic characterizations, single crystal X-ray analysis, in vitro xanthine oxidase and acetylcholinesterase inhibitory evaluation as well as in silico evaluation of selenium-based N-heterocyclic carbene compounds

Herein, eight new NHC-based selenourea derivatives were synthesized and characterized by using spectroscopic method (1H, 19F, and 13C NMR, FT-IR), and elemental analysis techniques. These compounds were synthesized by mixing benzimidazolium salts, potassium carbonate, and selenium powder in ethyl alcohol. Additionally, the molecular and crystal structures of the three compounds (1c, 2b, and 2c) were determined using the single-crystal x-ray diffraction (XRD) method. Diffraction analysis demonstrated the partial carbon-selenium double-bond character of these compounds. All compounds were determined to be highly potent inhibitors for AChE and XO enzymes. The IC50 values for the compounds were found in the range of 0.361–0.754 μM for XO and from 0.995 to 1.746 μM for AChE. The DNA binding properties of the compounds were investigated. These compounds did not have a remarkable DNA binding property. Also, DPPH radical scavenging activities of the compounds were also investigated. Compounds (1c), (2a), (3a), and (3b) exhibited more pronounced DPPH radical scavenging activity when compared to other compounds. Docking studies were applied by using AutoDock 4 to determine interaction mechanism of the selected compounds (1a), (1b), and (3b). The compound (1b) has good binding affinity (−9.78 kcal/mol) against AChE, and (−6.86 kcal/mol) for XO target. Drug similarity properties of these compounds compared to positive controls were estimated and evaluated by ADMET analysis. Furthermore, molecular dynamics simulations have been applied to understand the accuracy of docking studies. These findings and the defined compounds could be potential candidates for the discovery and progress of effective medicine(s) for AChE and XO in the future. Communicated by Ramaswamy H. Sarma