During the Lunar New Year of 2020, the Chinese government implemented a strict nationwide lockdown to prevent the spread of the COVID-19, which may have led to changes in the distribution of pollutants. To enhance our understanding of the three-dimensional evolution of pollutants under special control scenarios, this study used vehicle lidar to obtain vertical profiles of aerosols and ozone (O3) in Wuhan during the pandemic. Combined with ground observations and WRF-Chem model simulation results, we explored the evolution characteristics of pollutants. The results showed that the fine particulate matter (PM2.5) concentration near the ground in Wuhan City was significantly reduced (40%) during the emission control period. The aerosol concentration decreased rapidly with an increase in height, and the maximum loading height was consistent with the atmospheric boundary layer height. Conversely, due to factors such as the reduction of the precursor nitrogen dioxide (NO2) and rising temperatures, the near-ground O3 concentration increased by 59%. Despite the significant reduction in emission sources, lidar observations still captured distinct aerosol transport layers on March 7 and March 10, 2020. These transport layers gradually descended, affecting the ground-level aerosol concentration. Additionally, one typical process of O3 external transport was observed in the vertical direction. Our study provides a theoretical basis for a deeper understanding of the spatiotemporal distribution characteristics of pollutants during special control scenarios, aiding policymakers in formulating effective air pollution control strategies.