Humin is identified as the most recalcitrant fraction of soil organic matter, but its synthesis and depth variability in the soil profile are unknown. Here, we suggest that carboxyl-rich alicyclic structures (CRAM) and fused aromatic ring structures (FAR) can process significant components of the humin structure. We conducted molecular-level characterization of humin using advanced solid-state nuclear magnetic resonance spectroscopy (SSNMR) experiments and calculated the proportion of FAR and functionalities of CRAM (OCq, –C(CH)n, –CH3) structures. Dipolar dephased (dd) direct polarization magic angle spinning (DPMAS) NMR experiments provided insights into non-protonated carbon and mobile quaternary carbons. We calculated the proportions of non-protonated aromatic carbon and non-polar aliphatic C in the organic layers of the topsoil (Oa), mid-soil (Om), and mineral subsoil (Cg). It was evident that the total aliphatic carbon constitutes a significant proportion of humin, as is the non-protonated C attached to CH3. The 13C dd/DPMAS NMR spectrum of Cg humin clearly showed the formation and preservation of hydrophobic OCq, which is indicative of CRAM structures. CRAM structures could be attached to FAR, which makes the whole structure relatively more hydrophobic, a critical humin functionality in deeper soil. The findings from our research can be successfully utilized in terrestrial carbon sequestration studies to amplify the potential of humin as a recalcitrant carbon reservoir.