Diploid-like Chromosome Pairing Research Articles

The alternative transcription and expression characterization of Dmc1 in autotetraploid Carassius auratus.

Established autotetraploids often have a highly stable meiosis with high fertility compared with neo-autotetraploids. The autotetraploid Carassius auratus (4n = 200, RRRR) (4nRR), which stemmed from whole-genome duplication of Carassius auratus red var. (2n = 100, RR) (RCC), produces diploid gametes with an adopted diploid-like chromosome pairing in meiosis and maintains the formation of autotetraploid lineages. In this study, we focused on Dmc1, a meiosis-specific recombinase during the prophase of meiosis I, and elaborated on the genetic variation, alternative transcription, expression characterization, and epigenetic modification of Dmc1 in RCC and 4nRR. Two original Dmc1 from RCC were identified in 4nRR, and two duplicated Dmc1 differences in genetic composition were observed in 4nRR. Furthermore, we only noticed that one original and one duplicated Dmc1 were expressed in RCC and 4nRR, respectively. However, both possessed identical gene expression profiles, differential expression of sexual dimorphism, and hypomethylation levels. These results indicated that the specific expression of duplicated Dmc1 may be involve in the progression of meiosis of the diploid-like chromosome pairing in autotetraploid Carassius auratus. Herein, the findings significantly increase knowledge of meiosis of autopolyploid fish and provide meaningful insights into genetic breeding in polyploidy fish.

Non-homologous chromosome pairing during meiosis in haploid Brassica rapa.

Cytological observations of chromosome pairing showed that evolutionarily genome duplication might reshape non-homologous pairing during meiosis in haploid B. rapa. A vast number of flowering plants have evolutionarily undergone whole genome duplication (WGD) event. Typically, Brassica rapa is currently considered as an evolutionary mesohexaploid, which has more complicated genomic constitution among flowering plants. In this study, we demonstrated chromosome behaviors in haploid B. rapa to understand how meiosis proceeds in presence of a single homolog. The findings showed that a diploid-like chromosome pairing was generally adapted during meiosis in haploid B. rapa. Non-homologous chromosomes in haploid cells paired at a high-frequency at metaphase I, over 50% of examined meiocytes showed at least three pairs of bivalents then equally segregated at anaphase I during meiosis. The fluorescence immunostaining showed that the cytoskeletal configurations were mostly well-organized during meiosis. Moreover, the expressed genes identified at meiosis in floral development was rather similar between haploid and diploid B. rapa, especially the expression of known hallmark genes pivotal to chromosome synapsis and homologous recombination were mostly in haploid B. rapa. Whole-genome duplication evolutionarily homology of genomic segments might be an important reason for this phenomenon, which would reshape the first division course of meiosis and influence pollen development in plants.

Rapid Genomic and Genetic Changes in the First Generation of Autotetraploid Lineages Derived from Distant Hybridization of Carassius auratus Red Var. (\u2640)\u2009\xd7\u2009Megalobrama amblycephala (\u2642)

Autopolyploids are traditionally used to demonstrate multivalent pairing and unstable inheritance. However, the autotetraploid fish (4nRR) (RRRR, 4n = 200) derived from the distant hybridization of Carassius auratus red var. (RCC) (RR, 2n = 100) (♀) × Megalobrama amblycephala (BSB) (BB, 2n = 48) (♂) exhibits chromosome number (or ploidy) stability over consecutive generations (F1–F10). Comparative analysis based on somatic and gametic chromosomal loci [centromeric, 5S rDNA, and Ag-NORs (silver-stained nucleolar organizer regions)] revealed that a substantial loss of chromosomal loci during genome doubling increases the divergence between homologous chromosomes and that diploid-like chromosome pairing was restored during meiosis in the first generation of 4nRR lineages. In addition, a comparative analysis of genomes and transcriptomes from 4nRR (F1) and its diploid progenitor (RCC) exhibited significant genomic structure and gene expression changes. From these data, we suggest that genomes and genes diverge and that expression patterns change in the first generations following autotetraploidization, which are processes that might contribute to the stable inheritance and successful establishment of autotetraploid lineages.

Chromosome pairing in durum wheat haploids with and without ph1b of bread wheat

Durum or macaroni wheat (Triticum turgidum L., 2n = 4x = 28; AABB) is an allotetraploid with two related genomes, AA and BB, each with seven pairs of homologous chromosomes. Although the corresponding chromosomes of the two genomes are potentially capable of pairing with one another, the Ph1 (Pairing homoeologous) gene in the long arm of chromosome 5B permits pairing only between homologous partners. As a result of this Ph1-exercised disciplinary control, durum wheat and its successor, bread wheat (Triticum aestivum L., 2n = 6x = 42; AABBDD) show diploid-like chromosome pairing and hence disomic inheritance. The Ph mutants in the form of deletions are available in bread wheat (ph1b) and durum wheat (ph1c). Thus, ph1b-haploids of bread wheat and ph1c-haploids of durum wheat show extensive homoeologous pairing that has been shown by us and several others. Here we study the effect of ph1b allele of bread wheat on chromosome pairing in durum haploids, whereas we studied earlier the effect of ph1c allele in durum haploids that we synthesized. In durum wheat, the ph1b-haploids show much higher (49.4% of complement) pairing than the ph1c-haploids (38.6% of complement).

Formation of 2n gametes in durum wheat haploids: Sexual polyploidization

Allopolyploidy, resulting from interspecific and intergeneric hybridization accompanied by sexual doubling of chromosomes, has played a major role in the evolution of crop plants that sustain humankind. The allopolyploid species, including durum wheat, bread wheat, and oat, have developed a genetic control of chromosome pairing that confers on them meiotic regularity (diploid-like chromosome pairing), and hence reproductive stability, and disomic inheritance. Being natural hybrids, they enjoy the benefits of hybridity as well as polyploidy that make them highly adaptable to diverse environments. Despite the complexities of sexual reproduction, it is widespread among plants and animals. Sexual polyploids are highly successful in nature. Sexual polyploidization is far more efficient than somatic chromosome doubling. Sexual polyploidization effected by functioning of unreduced (2n) gametes in the parental species or in their hybrids has been instrumental in producing our grain, fiber, and oilseed crops. Evidence is presented for the occurrence of sexual polyploidization in durum haploids. ThePh1-induced failure of homoeologous pairing is an important factor in the formation of first division restitution(FDR) nuclei and 2n gametes. The evolutionary and breeding significance of sexual polyploidization is discussed. It is emphasized that three factors, viz.,sexual reproduction, allopolyploidy, and genetic control of chromosome pairing,jointly constitute a perfect recipe for cataclysmic evolution in nature.

Transfer of Ph I genes promoting homoeologous pairing from Triticum speltoides to common wheat

Diploid-like chromosome pairing in polyploid wheat is controlled by several Ph (pairing homoeologous) genes with major and minor effects. Homoeologous pairing occurs in either the absence of these genes or their inhibition by genes from other species (Ph (I) genes). We transferred Ph (I) genes from Triticum speltoides (syn Aegilops speltoides) to T. aestivum, and on the basis of further analysis it appears that two duplicate and independent Ph (I) genes were transferred. Since Ph (I) genes are epistatic to the Ph genes of wheat, homoeologous pairing between the wheat and alien chromosomes occurs in the F1 hybrids. Using the Ph (I) gene stock, we could demonstrate homoeologous pairing between the wheat and Haynaldia villosa chromosomes. Since homoeologous pairing occurs in F1 hybrids and no cytogenetic manipulation is needed, the Ph (I) gene stock may be a versatile tool for effecting rapid and efficient alien genetic transfers to wheat.

Meiotic Analysis of Astragalus cicer L. I. octaploids

Meiosis has been investigated in five clones (genotypes) of Astragalus cicer L. Features characteristic of all clones included strongly diploid-like chromosome pairing at first metaphase, regular disjunction at first anaphase, high pollen viability, and plant fertility. Two contrasting patterns of meiosis were distinguished among the five clones based on their (1) frequencies of bivalents and (2) inversely proportional frequencies of multivalents. Meiotic behavior of A. cicer is compared and contrasted with that of other octaploid species. We conclude that A. cicer is a segmental allooctaploid, possibly an autoallooctaploid with two largely divergent genomes, in which meiosis has been diploidized by a pairing control system.

Fine physical mapping of Ph1, a chromosome pairing regulator gene in polyploid wheat.

The diploid-like chromosome pairing in polyploid wheat is controlled by the Ph1 (pairing homoeologous) gene that is located on chromosome arm 5BL. By using a combination of cytogenetic and molecular techniques, we report the physical location of the Ph1 gene to a submicroscopic chromosome region (Ph1 gene region) that is flanked by the breakpoints of two deletions (5BL-1 and ph1c) and is marked by a DNA probe (XksuS1). The Ph1 gene region is present distal to the breakpoint of deletion 5BL-1 but proximal to the C-band 5BL2.1. Two other DNA probes (Xpsr128 and Xksu75) flank the region-Xpsr128 being proximal and Xksu75 being distal. The estimated size of the region is less than 3 Mb. The chromosome region around the Ph1 gene is high in recombination as the genetic distance of the region between 5BL-1 breakpoint and C-band 5BL2.1 (not resolved by the microscope) is at least 9.3 cM.

Genotypic control of chromosome pairing in amphiploids involving the cultivated oat Avena sativa L.

A genotype of the diploid species Avena longiglumis (Cw 57) has been shown to modify the genetic control of diploid-like chromosome pairing in the cultivated oat, A. sativa (2n=6x=42) leading to increased homoeologous chromosome pairing in 4x hybrids between the two species (Rajhathy & Thomas, 1974). The Cw 57 genotype has a similar effect in increasing homoeologous chromosome pairing in amphiploids combining diploid and hexaploid genomes including associations between alien chromosomes and their corresponding pairs in hexaploid species. The effect of the Cw 57 genotype is probably in altering the specificity of chromosome pairing in the early stages of meiosis. The use of the Cw 57 genotype to induce homoeologous chromosome pairing as a technique for the transfer of desirable alien variation into the cultivated oat is discussed.

Evidence for genetic suppression of heterogenetic chromosome pairing in polyploidy species of Solanum, sect. Petota

Data on chromosome pairing in haploids and interspecific hybrids of Solanum, sect. Petota reported in the literature were used to determine whether the diploidlike chromosome pairing that occurs in some of the polyploid species of the section is regulated by the genotype or brought about by some other mechanism. The following trends emerged from these data. Most of the polyploid × polyploid hybrids had high numbers of univalents, which seemed to indicate that the polyploid species were constructed from diverse genomes. Haploids, except for those derived from S. tuberosum, had incomplete chromosome pairing. All hybrids from diploid × diploid crosses had more or less regular chromosome pairing, which suggested that all investigated diploid species have the same genome. Likewise, hybrids from polyploid × diploid crosses had high levels of chromosome pairing. These paradoxical results are best explained if it is assumed that (i) the genotypes of most polyploid species, but not those of the diploid species, suppress heterogenetic pairing, (ii) that nonstructural chromosome differentiation is present among the genomes of both diploid and polyploid species, and (iii) the presence of the genome of a diploid species in a polyploid × diploid hybrid results in promotion of heterogenetic pairing. It is, therefore, concluded that heterogenetic pairing in most of the polyploid species is genetically suppressed.

Genetic regulation of diploid-like chromosome pairing in Avena

The genetic control of diploid-like chromosome pairing in Avena is discussed and compared with the diploidizing mechanisms in the hexaploid breadwheat and the hexaploid tall fescue. An examination of the published literature reveals that there is a remarkable similarity in these three regulatory mechanisms (Table 3). It is further concluded that the diploidizing gene system in the polyploid species of Avena is as complex as in wheat. A reappraisal of the published information on Avena and other polyploids, followed by further studies, might yield more information about the functional aspects of the diploidizing mechanisms.

Genetic regulation of diploid-like chromosome pairing in the hexaploid species, Festuca arundinacea Schreb. and F. rubra L. (Gramineae)

The basis of diploid-like chromosome pairing in hexaploid (2n=6x=42) Festuca arundinacea Schreb. and hexaploid F. rubra L. has been investigated. On the combined evidence derived from chromosome pairing in some euploid (2n=42) and monosomic (2n=41) hybrids from a diallel set of crosses between ten geographically diverse ecotypes of tall fescue, intergeneric hybrids involving tall fescue as well as red fescue, and euploid (2n=56) and aneuploid (2n=52, 53, 54, 55) amphiploids between Lolium multiflorum and F. arundinacea, it is concluded that diploid-like meiosis in these hexaploid species as well as in other natural polyploid species of Festuca is under genetic control. It is further inferred that this diploidizing gene(s) system must at least be disomic in dosage to be effective in suppressing homoeologous pairing and, therefore, had no influence upon pairing in haploid complements of the hybrids, i.e., it is haplo-insufficient or hemizygous-ineffective. — It has also been shown that sterility in hybrids between some geographically isolated ecotypes of tall fescue results from irregular meiosis due to the breakdown of the regulatory mechanism, rather than from chromosomal differentiation of the parental ecotypes as widely believed so far. The evolutionary significance of such a gene-repressing effect of certain genotypes or genes is indicated. — It is further suggested that the hemizygous ineffectiveness of the genetic control of bivalent pairing is of evolutionary significance and could have major implications on the cytogenetic relationships and the breeding of the entire Lolium-Festuca complex.

B chromosomes and chromosome pairing in Lolium perenne X Festuca arundinacea hybrid.

ALTHOUGH many crop plants evolved by interspecific hybridization and polyploidy, for example wheat (Triticum aestivum) and oats (Avena sativa), the production of synthetic species combining the genomes of diverse species has had little impact in plant breeding. This is chiefly because of failure to establish synthetic polyploids with the meiotic stability of natural polyploids. In natural polyploids, chromosome pairing is confined to homologous chromosomes with the result that only bivalents are formed and this ensures regular disjunction and disomic inheritance. In wheat, diploid-like chromosome pairing is controlled by a gene or genes on chromosome 5B which suppress the pairing of homoeologous chromosomes1. Reports of similar control in the cultivated oat have been made2,3. Moreover, it has been recently shown that B chromosomes can have a comparable effect in suppressing homoeologous chromosome pairing in polyploids4,5.