Dimethyl Sulfoxide Reduction Research Articles

A novel hexameric NADP+ -reducing [FeFe] hydrogenase from Moorella thermoacetica.

Acetogenic bacteria such as the thermophilic anaerobic model organism Moorella thermoacetica reduce CO2 with H2 as a reductant via the Wood-Ljungdahl pathway (WLP). The enzymes of the WLP of M. thermoacetica require NADH, NADPH, and reduced ferredoxin as reductants. Whereas an electron-bifurcating ferredoxin- and NAD+ -reducing hydrogenase HydABC had been described, the enzyme that reduces NADP+ remained to be identified. A likely candidate is the HydABCDEF hydrogenase from M. thermoacetica. Genes encoding for the HydABCDEF hydrogenase are expressed during growth on glucose and dimethyl sulfoxide (DMSO), an alternative electron acceptor in M. thermoacetica, whereas expression of the genes hydABC encoding for the electron-bifurcating hydrogenase is downregulated. Therefore, we have purified the hydrogenase from cells grown on glucose and DMSO to apparent homogeneity. The enzyme had six subunits encoded by hydABCDEF and contained 58 mol of iron and 1 mol of FMN. The enzyme reduced methyl viologen with H2 as reductant and of the physiological acceptors tested, only NADP+ was reduced. Electron bifurcation with pyridine nucleotides and ferredoxin was not observed. H2 -dependent NADP+ reduction was optimal at pH 8 and 60 °C; the specific activity was 8.5 U·mg-1 and the Km for NADP+ was 0.086 mm. Cell suspensions catalyzed H2 -dependent DMSO reduction, which is in line with the hypothesis that the NADP+ -reducing hydrogenase HydABCDEF is involved in electron transfer from H2 to DMSO.

Microbial drivers of DMSO reduction and DMS-dependent methanogenesis in saltmarsh sediments

Saltmarshes are highly productive environments, exhibiting high abundances of organosulfur compounds. Dimethylsulfoniopropionate (DMSP) is produced in large quantities by algae, plants, and bacteria and is a potential precursor for dimethylsulfoxide (DMSO) and dimethylsulfide (DMS). DMSO serves as electron acceptor for anaerobic respiration leading to DMS formation, which is either emitted or can be degraded by methylotrophic prokaryotes. Major products of these reactions are trace gases with positive (CO2, CH4) or negative (DMS) radiative forcing with contrasting effects on the global climate. Here, we investigated organic sulfur cycling in saltmarsh sediments and followed DMSO reduction in anoxic batch experiments. Compared to previous measurements from marine waters, DMSO concentrations in the saltmarsh sediments were up to ~300 fold higher. In batch experiments, DMSO was reduced to DMS and subsequently consumed with concomitant CH4 production. Changes in prokaryotic communities and DMSO reductase gene counts indicated a dominance of organisms containing the Dms-type DMSO reductases (e.g., Desulfobulbales, Enterobacterales). In contrast, when sulfate reduction was inhibited by molybdate, Tor-type DMSO reductases (e.g., Rhodobacterales) increased. Vibrionales increased in relative abundance in both treatments, and metagenome assembled genomes (MAGs) affiliated to Vibrio had all genes encoding the subunits of DMSO reductases. Molar conversion ratios of <1.3 CH4 per added DMSO were accompanied by a predominance of the methylotrophic methanogens Methanosarcinales. Enrichment of mtsDH genes, encoding for DMS methyl transferases in metagenomes of batch incubations indicate their role in DMS-dependent methanogenesis. MAGs affiliated to Methanolobus carried the complete set of genes encoding for the enzymes in methylotrophic methanogenesis.

The determination of dimethyl sulfoxide in natural waters using electrochemical reduction

AbstractA highly specific electrochemical reduction method has been developed that enables the trace level measurement of dimethyl sulfoxide (DMSO) concentration in natural waters. Following the sparging of native dimethyl sulfide (DMS) from the sample, DMSO is reduced to DMS using a novel electrochemical workflow that relies upon CuSO4 as a redox mediator. The DMS produced through DMSO reduction is collected, concentrated, and detected using a previously described Purge &amp; Trap‐Atmospheric Pressure Chemical Ionization‐Tandem Mass Spectrometry (P&amp;T‐APCI‐MS/MS) analytical workflow. The method provides a 0.5 pM detection limit for the analysis of DMSO in 10 mL sample volumes, with a demonstrated method precision of 5.4% for the analysis of consecutive 10 nM aqueous standards. The method selectivity for DMSO was evaluated using a range of commonly observed marine organosulfur compounds, none of which were found to interfere with the analysis at a reduction potential of 4 V. Method intercomparison confirmed that the electrochemical reduction provides results that are equivalent (at the 95% confidence level) to an established TiCl3 reduction protocol for the analysis of both freshwater and seawater samples. Relative to established methods of DMSO reduction, the electrochemical method provides excellent selectivity and reproducibility, and offers the potential for automated, high‐throughput analysis. In addition, the new electrochemical method does not require expensive, difficult to procure enzymes or hazardous, corrosive chemical reagents. Depth profile measurements of DMSO, DMS, and dimethylsulfoniopropionate (DMSP) for unfiltered seawater samples collected in Saanich Inlet, a coastal fjord in British Columbia, demonstrate the effectiveness of the DMSO reduction method in an oceanographic context.

Nonredundant Dimethyl Sulfoxide Reductases Influence Salmonella enterica Serotype Typhimurium Anaerobic Growth and Virulence.

Facultative anaerobic enteric pathogens can utilize a diverse array of alternate electron acceptors to support anaerobic metabolism and thrive in the hypoxic conditions within the mammalian gut. Dimethyl sulfoxide (DMSO) is produced by methionine catabolism and can act as an alternate electron acceptor to support anaerobic respiration. The DMSO reductase complex consists of three subunits, DmsA, DmsB, and DmsC, and allows bacteria to grow anaerobically with DMSO as an electron acceptor. The genomes of nontyphoidal Salmonella enterica encode three putative dmsABC operons, but the impact of the apparent genetic redundancy in DMSO reduction on the fitness of nontyphoidal S. enterica during infection remains unknown. We hypothesized that DMSO reduction would be needed for S. enterica serotype Typhimurium to colonize the mammalian gut. We demonstrate that an S. Typhimurium mutant with loss of function in all three putative DMSO reductases (ΔdmsA3) poorly colonizes the mammalian intestine when the microbiota is intact and when inflammation is absent. DMSO reduction enhances anaerobic growth through nonredundant contributions of two of the DMSO reductases. Furthermore, DMSO reduction influences virulence by increasing expression of the type 3 secretion system 2 and reducing expression of the type 3 secretion system 1. Collectively, our data demonstrate that the DMSO reductases of S. Typhimurium are functionally nonredundant and suggest DMSO is a physiologically relevant electron acceptor that supports S. enterica fitness in the gut.

Reversible Hydrogenase Activity Confers Flexibility to Balance Intracellular Redox in Moorella thermoacetica.

Hydrogen (H2) converted to reducing equivalents is used by acetogens to fix and metabolize carbon dioxide (CO2) to acetate. The utilization of H2 enables not only autotrophic growth, but also mixotrophic metabolism in acetogens, enhancing carbon utilization. This feature seems useful, especially when the carbon utilization efficiency of organic carbon sources is lowered by metabolic engineering to produce reduced chemicals, such as ethanol. The potential advantage was tested using engineered strains of Moorella thermoacetica that produce ethanol. By adding H2 to the fructose-supplied culture, the engineered strains produced increased levels of acetate, and a slight increase in ethanol was observed. The utilization of a knockout strain of the major acetate production pathway, aimed at increasing the carbon flux to ethanol, was unexpectedly hindered by H2-mediated growth inhibition in a dose-dependent manner. Metabolomic analysis showed a significant increase in intracellular NADH levels due to H2 in the ethanol-producing strain. Higher NADH level was shown to be the cause of growth inhibition because the decrease in NADH level by dimethyl sulfoxide (DMSO) reduction recovered the growth. When H2 was not supplemented, the intracellular NADH level was balanced by the reversible electron transfer from NADH oxidation to H2 production in the ethanol-producing strain. Therefore, reversible hydrogenase activity confers the ability and flexibility to balance the intracellular redox state of M. thermoacetica. Tuning of the redox balance is required in order to benefit from H2-supplemented mixotrophy, which was confirmed by engineering to produce acetone.

Energy-conserving dimethyl sulfoxide reduction in the acetogenic bacterium Moorella thermoacetica.

Moorella thermoacetica is one of the well-studied thermophilic acetogenic bacteria. It grows by oxidation of organic substrates, CO or H2 coupled to CO2 reduction to acetate. Here, we describe that M. thermoacetica can also use dimethyl sulfoxide as terminal electron acceptor. Growth of M. thermoacetica on glucose or H2 +CO2 was stimulated by dimethyl sulfoxide (DMSO). Membranes showed a DMSO reductase activity, that was induced by growing cells in presence of DMSO. The enzyme used reduced anthraquinone-2,6-disulfonate, benzyl- and methyl viologen as electron donor, but not NAD(P)H. Activity was highest at pH5 and 60°C, the Km for DMSO was 2.4 mM. Potential DMSO reductase subunits were identified by peptide mass fingerprinting; they are encoded in a genomic region that contains three potential dmsA genes, three dmsB genes and one dmsC gene. Transcriptome analysis revealed that two different dmsAB gene clusters were induced in the presence of DMSO. The function of these two and their predicted biochemical features are discussed. In addition, the data are in line with the hypothesis that M. thermoacetica can use DMSO alongside CO2 as electron acceptor and DMSO reduction is catalysed by an energy-conserving, membrane-bound electron transport chain with DMSO as final electron acceptor.

Fate and behavior of 14C-labelled ionic compounds in a soil simulation test

The influence of an ionic functional group on the fate and behavior of chemicals in the environment has so far not been systematically investigated. This study, therefore, examines the following three substances with high structural similarity but differing charge: non-charged 4-n-dodecylphenol[phenylring-14C(U)] (14C-DP), negatively charged 4-n-dodecylbenzenesulfonicacid[phenylring-14C(U)] sodium salt (14C-DS−) and positively charged 4-n-dodecylbenzyltrimethylammonium chloride[phenylring-14C(U)] (14C-DA+). They were investigated in a soil simulation study according to the OECD 307 test guideline by measuring the distribution of the applied radioactivity (AR) among volatile, mineralized, extractable and non-extractable residues (NER) in one soil after 0, 1, 7, 14, 49, 84 and 124 days of incubation. Extractable portions of 14C were examined by means of radio-TLC and -HPLC analyses. Microbial activity of the soil incubated with and without 14C-DP, 14C-DS− and 14C-DA+ was determined measuring the reduction of dimethylsulfoxide (DMSO) over time. After 124 days of incubation highest mineralization could be observed for 14C-DS− (64.5% AR). Except CO2, no volatile residues were formed over time. Besides the parent compounds, polar (14C-DP, 14C-DS− and 14C-DA+) and nonpolar (14C-DA+) transformation products were detected. Highest amounts of 14C were extracted using methanol and were thus potentially bioavailable for soil microorganisms. Microbial activity was markedly higher in soil incubated with 14C-DP and 14C-DS− compared to 14C-DA+ or soil without any treatment. Half-lives (DT50 k2) at 18 °C were as follows: DA+ (61.8 days) > DS− (18.2 days) > DP (10.0 days). In case of the cationic compound and its transformation products we conclude that a higher sorption affinity to soil particles leads to reduced bioavailability for microorganisms and thus reduced mineralization resulting in a higher persistence compared to anionic and non-charged organic compounds in soil. The impact of our findings on the persistence assessment of chemicals when performing OECD guideline tests in soil, water-sediment and surface water is discussed.

Potential roles of dimethysulfoxide in regional sulfur cycling and phytoplankton physiological ecology in the NE Subarctic Pacific

AbstractWe measured the concentration and turnover rates of dimethylsulfoxide (DMSO) across the northeast Subarctic Pacific (NESAP) to better understand the role of this compound in regional sulfur cycling and phytoplankton physiological ecology. Using ship‐track observations and Lagrangian drifter surveys, we examined the spatial and temporal components of DMS and DMSO variability, comparing rates of DMSO reduction with simultaneous measurements of dimethylsulfide (DMS) oxidation and dimethylsulfoniopropionate (DMSP) cleavage. Our results show high concentrations and rapid turnover of DMSO across much of our NESAP survey region. DMS and DMSO concentrations ranged from &lt; 1 nM to maxima of 26 nM and 183 nM, respectively, and exhibited a nonlinear positive relationship. Rate constants for DMSO reduction to DMS ranged from &lt; 1 to 6.5 d−1 and were correlated to bacterial production and phytoplankton taxonomic composition. DMSO reduction rates exceeded dissolved DMSP cleavage at nearly all stations, and exceeded DMS oxidation rates at four stations where DMSO reduction and DMS oxidation were measured simultaneously. At these stations, net DMS production from DMSO ranged from 0.50 to 7.18 nM d−1. During our Lagrangian survey, DMSO concentrations decreased during periods of peak mid‐day irradiance. A strong correlation between DMSO concentrations, non‐photochemical quenching and photochemical efficiency of photosystem II (Fv/Fm) suggest a potential role for DMSO in photo‐protection, supporting previous suggestions of an anti‐oxidant function for this molecule. Our findings highlight the potential contribution of DMSO to net DMS production in the NESAP, and suggest a role for this compound in phytoplankton physiological ecology.

Potential methane production and oxidation along the soil chronosequence of the Rotmoos glacier forefield

Summary Five differently developed soils aged 6, 35, 80, 150, and &gt;5000 years with the same bedrock and the same (current) climate conditions were chosen to assess abiotic and enzymatic properties as well as methanogenic and methanotrophic activities. Most abiotic properties (dry weight, pH, soil organic matter, and ammonium content), enzyme activities (dehydrogenase [DH] activity, ammonification [AM] rate, dimethylsulfoxide reduction), and potential methane oxidation (PoMO) per gram of dry weight (DW) increased with soil age. In contrast, potential methane production (PoMP) as well as the nitrate content per gram of DW and most enzymatic properties per gram of soil organic matter (SOM) did not increase with soil age but reached its maximum in the middle-aged soils (80–150 years). Our results show that (i) microbial activity does not consequently increase with SOM content/soil age; (ii) methane production can be measured in undeveloped soils, whereas methane oxidation is more restricted to fully developed soils; and (iii) certain soil modifications (change in water content, ammonium addition) could influence potential methane production/oxidation. When considering the concurrent release of raw soil because of the melting of perpetual ice, these data could help to better understand and assess the consequences of global change.

PF779 VIABILITY OF HEMATOPOETIC STEM CELLS FOLLOWING STORAGE AT −80OC WITH 5% DIMETHYLSULFOXIDE AND HEMATOLOGIC RECOVERY IN TRANSPLANTED MYELOMA PATIENTS

Background:Dimethylsulfoxide (DMSO) is a major intracellular cryoprotectant, used for cryopreservation of stem cells. It is toxic to both cells and patients at temperatures above 0oC. Reduction of this effect is achieved by either washing of cells after thawing or by reduction of DMSO during freezing and storage. The latter requires addition of extracellular cryoprotectants to the freezing media.Aims:We assessed the effect of low DMSO concentration and different hematocrits of the frozen cells on cell viability and hematologic recovery in patients, transplanted for multiple myeloma.Methods:Cells were non‐programmed frozen and stored at −80oC in a cryoprotectant solution achieving final concentrations of 5% DMSO, 3.6% of hydroxyethyl starch (HES, Weight average molecular weight 450 000 Da) and 3% of human serum albumin. The cell concentration in the frozen product for the first 77 patients (84 transplantations) varied between 100x106 and 250x106 cells/ml. In an attempt to reduce the amount of DMSO infused, for the rest of the patients (n = 172; 192 transplantations) we further decreased the volume of the freezing suspension by removal of the entire plasma.The average age of the transplanted patients was 55 (35 ‐ 71). The cells were bedside thawed at 37oC water bath. The average cell dose was 2,95x106/kg (1,3 – 9,2x106/kg).Results:Viability of the stem cells following thawing assessed by trypan blue exclusion was 95,34% (70–99). The hematocrit of the frozen cells had no effect on cell viability (94,80%(low) vs 95,52%(high)). The major complaints, if any, during stem cell infusion were coughing and an increase in nausea and vomiting induced by the prior conditioning.The average time for hematological recovery was 11,66 days (between 9 and 19) for the neutrophils, and 12,17 (between 9 and 20) days for the platelets. There was no significant difference in viability and hematologic recovery (11,86 and 12,60 vs 11,59 and 12,02) between patients receiving cells frozen with low or high hematocrit.Summary/Conclusion:Dimethylsulfoxide, despite its cryoprotective properties, is toxic for stem cells at temperatures above zero C and induces many side effects (cardiac, neurologic, respiratory, etc.) in the patients. To reduce those side effects we use lower DMSO concentration, high hematocrit resulting in lower volume of the frozen cell suspension, thus reducing the final quantity of DMSO to be infused to the patients. This does not affect the cell viability or the hematologic recovery of patients after transplantation. Our easily performed method for unprogrammed freezing of stem cells with final DMSO concentration 5% at −80oC is safe, well tolerated, and provides cryopreservation, which allows high viability and stable cell engraftment, while reducing the undesired side effects of DMSO.

DFT study of the dimethyl sulfoxide reduction on silicene

We have studied the minimum energy pathway for the dimethyl sulfoxide reduction on silicene substrates. Starting with a configuration in which the molecule and the substrate are not interacting, the dimethyl sulfide molecule is physisorbed on the silicene as a first step, until it is finally reduced with the formation of silicene oxide units. As the reaction proceeds, the system gains energy, favoring the reduction of the molecule. The energy barrier for the reaction to proceed forward is 0.20 eV, which is 0.30 eV lower than the energy barrier for desorption. At the maximum coverage of ¼ monolayer, silicene oxide lines are formed. These results pave the way to use silicene as a substrate to reduce dimethyl sulfoxide (a molecule with low dose toxicity) to dimethyl sulfide, an important compound in the global ecosystem cycle. In the final state, the DMS molecule is physisorbed on silicene oxide. Therefore, this reaction is also a viable and efficient mechanism for oxidation of silicene.

Deep-Sea Bacterium Shewanella piezotolerans WP3 Has Two Dimethyl Sulfoxide Reductases in Distinct Subcellular Locations.

Dimethyl sulfoxide (DMSO) acts as a substantial sink for dimethyl sulfide (DMS) in deep waters and is therefore considered a potential electron acceptor supporting abyssal ecosystems. Shewanella piezotolerans WP3 was isolated from west Pacific deep-sea sediments, and two functional DMSO respiratory subsystems are essential for maximum growth of WP3 under in situ conditions (4°C/20 MPa). However, the relationship between these two subsystems and the electron transport pathway underlying DMSO reduction by WP3 remain unknown. In this study, both DMSO reductases (type I and type VI) in WP3 were found to be functionally independent despite their close evolutionary relationship. Moreover, immunogold labeling of DMSO reductase subunits revealed that the type I DMSO reductase was localized on the outer leaflet of the outer membrane, whereas the type VI DMSO reductase was located within the periplasmic space. CymA, a cytoplasmic membrane-bound tetraheme c-type cytochrome, served as a preferential electron transport protein for the type I and type VI DMSO reductases, in which type VI accepted electrons from CymA in a DmsE- and DmsF-independent manner. Based on these results, we proposed a core electron transport model of DMSO reduction in the deep-sea bacterium S. piezotolerans WP3. These results collectively suggest that the possession of two sets of DMSO reductases with distinct subcellular localizations may be an adaptive strategy for WP3 to achieve maximum DMSO utilization in deep-sea environments.IMPORTANCE As the dominant methylated sulfur compound in deep oceanic water, dimethyl sulfoxide (DMSO) has been suggested to play an important role in the marine biogeochemical cycle of the volatile anti-greenhouse gas dimethyl sulfide (DMS). Two sets of DMSO respiratory systems in the deep-sea bacterium Shewanella piezotolerans WP3 have previously been identified to mediate DMSO reduction under in situ conditions (4°C/20 MPa). Here, we report that the two DMSO reductases (type I and type VI) in WP3 have distinct subcellular localizations, in which type I DMSO reductase is localized to the exterior surface of the outer membrane and type VI DMSO reductase resides in the periplasmic space. A core electron transport model of DMSO reduction in WP3 was constructed based on genetic and physiological data. These results will contribute to a comprehensive understanding of the adaptation mechanisms of anaerobic respiratory systems in benthic microorganisms.

Efficiency of DMSO as hydroxyl radical probe in an Electrochemical Advanced Oxidation Process − Reactive oxygen species monitoring and impact of the current density

In electro-Fenton process, current density is a key operating parameter for organic compound mineralization. In order to explain mineralization yields obtained during the electrochemical treatment of an antibiotic metronidazole (MTZ) in a mono-compartment batch reactor, the evolution of the reactive oxygen species was discussed. Dissolved oxygen, Hydrogen peroxide and hydroxyl radical (OH) concentrations were followed during electrolysis performed at current intensities from 50 to 600mA corresponding to current densities from 0.04 to 0.45mAcm−2, using a three dimensional graphite felt as working electrode. Dimethylsulfoxide (DMSO) was used to trap hydroxyl radicals by the production of a stable intermediate, methanesulfonate; however the evolution of hydroxyl radical concentration was not in accordance with MTZ mineralization yields. Results showed that on the one hand, for the highest studied current densities, dissolved oxygen could become a limiting reagent for the OH quantification. On the other hand, DMSO can be oxidized and reduced at the electrodes surface. Indeed, Dimethyl sulfide (DMS), a byproduct from the electrochemical reduction of DMSO was detected during the electrolysis. DMSO appeared therefore relevant as a hydroxyl radical probe in the case of the electro-Fenton process only for low applied current densities, until 0.07mAcm−2 in the present study.

CRP Regulates D-Lactate Oxidation in Shewanella oneidensis MR-1.

Shewanella oneidensis MR-1 is a heterotrophic facultative anaerobe that respires using various organic and inorganic compounds. This organism has served as a model to study bacterial metabolic and regulatory systems that facilitate their survival in redox-stratified environments. The expression of many anaerobic respiratory genes in MR-1, including those for the reduction of fumarate, dimethyl sulfoxide, and metal oxides, is regulated by cyclic AMP receptor protein (CRP). However, relatively little is known about how this organism regulates the expression of catabolic enzymes catalyzing the oxidation of organic compounds, including lactate. Here, we investigated transcriptional mechanisms for the lldP (SO_1522) and dld (SO_1521) genes, which encode putative lactate permease and D-lactate dehydrogenase, respectively, and demonstrate that CRP regulates their expression in MR-1. We found that a crp-deletion mutant of MR-1 (Δcrp) showed impaired growth on D-lactate. Complementary expression of dld in Δcrp restored the ability to grow on D-lactate, indicating that the deficient growth of Δcrp on D-lactate is attributable to decreased expression of dld. In vivo transcription and in vitro electrophoretic mobility shift assays reveal that CRP positively regulates the expression of the lldP and dld genes by directly binding to an upstream region of lldP. Taken together, these results indicate that CRP is a global transcriptional regulator that coordinately regulates the expression of catabolic and respiratory pathways in MR-1, including D-lactate dehydrogenase and anaerobic terminal reductases.

Determination of residual dimethylsulfoxide in cryopreserved cardiovascular allografts.

Dimethylsulfoxide (DMSO) is a solvent which protects the structure of allografts during the cryopreservation and thawing process. However, several toxic effects of DMSO in patients after transplantation of cryopreserved allografts have been described. The aim of this study is to determine the residual DMSO in the cardiovascular allografts after thawing and preparation of cryopreserved allografts for clinical application following guidelines of the European Pharmacopoeia for DMSO detection. Four types of EHB allografts (aortic valve-AV, pulmonary valve-PV, descending thoracic aorta-DA, and femoral artery-FA) are cryopreserved using as cryoprotecting solution a 10% of DMSO in medium 199. Sampling is carried out after thawing, after DMSO dilution and after delay of 30min from final dilution (estimated delay until allograft implantation). After progressive thawing in sterile water bath at 37-42°C (duration of about 20min), DMSO dilution is carried out by adding consecutively 33, 66 and 200mL of saline. Finally, tissues are transferred into 200mL of a new physiologic solution. Allograft samples are analysed for determination of the residual DSMO concentration using a validated Gas Chromatography analysis. Femoral arteries showed the most important DMSO reduction after the estimated delay: 92.97% of decrease in the cryoprotectant final amount while a final reduction of 72.30, 72.04 and 76.29% in DMSO content for AV, PV and DA, was found, respectively. The residual DMSO in the allografts at the moment of implantation represents a final dose of 1.95, 1.06, 1.74 and 0.26mgkg-1 in AV, PV, DA and FA, respectively, for men, and 2.43, 1.33, 2.17 and 0.33mgkg-1 for same tissues for women (average weight of 75kg in men, and 60kg in women). These results are seriously below the maximum recommended dose of 1g DMSOkg-1 (Regan et al. in Transfusion 50:2670-2675, 2010) of weight of the patient guaranteeing the safety and quality of allografts.

Processes driving seasonal variability in DMS, DMSP, and DMSO concentrations and turnover in coastal Antarctic waters

AbstractThis study presents new measurements of the concentrations and turnover rates of dimethyl sulfide (DMS), dimethylsulfoniopropionate (DMSP), and dimethyl sulfoxide (DMSO) in coastal waters near Palmer Station, Antarctica, during the spring and summer of 2012–2013. Using several novel analytical and experimental techniques, we document variability in DMS, DMSP, and DMSO (DMS/P/O) concentrations and quantify dominant production and removal terms in the mixed layer DMS budget. Our results demonstrate considerable seasonal variability in the concentration of DMS (range 0–20 nM), total DMSP (8–160 nM), and total DMSO (4–160 nM). Over the seasonal cycle, dissolved DMSP concentrations were well correlated with total DMSP concentrations and the abundance of Phaeocystis antarctica, while DMSO concentrations (total and dissolved) were well correlated with DMS concentrations. DMSP cleavage from the dissolved pool (mean rate = 5.5 nM d−1) and release from microzooplankton grazing (mean 5.6 nM d−1) were the dominant sources of DMS, with smaller DMS production rates associated with DMSO reduction from the dissolved pool (mean 2.6 nM d−1) and krill grazing (mean 0.82 nM d−1). Specific rate constants for DMSP cleavage were inversely related to net primary production. Bacterial uptake was a primary contributor to DMS removal (mean −12 nM d−1), and we observed a significant correlation between bacterial production and gross DMS loss rate constants. Estimated sea‐air flux and photo‐oxidation constituted secondary DMS sinks. Our experimental and analytical methods provide insight into the DMS/P/O cycle at Palmer Station, and a starting point for future studies examining inter‐annual DMS/P/O variability in coastal Antarctic waters.

Dimethyl sulfoxide reduction by a hyperhermophilic archaeon Thermococcus onnurineus NA1 via a cysteine-cystine redox shuttle.

A variety of microbes grow by respiration with dimethyl sulfoxide (DMSO) as an electron acceptor, and several distinct DMSO respiratory systems, consisting of electron carriers and a terminal DMSO reductase, have been characterized. The heterotrophic growth of a hyperthermophilic archaeon Thermococcus onnurineus NA1 was enhanced by the addition of DMSO, but the archaeon was not capable of reducing DMSO to DMS directly using a DMSO reductase. Instead, the archaeon reduced DMSO via a cysteine-cystine redox shuttle through a mechanism whereby cystine is microbially reduced to cysteine, which is then reoxidized by DMSO reduction. A thioredoxin reductase-protein disulfide oxidoreductase redox couple was identified to have intracellular cystine-reducing activity, permitting recycle of cysteine. This study presents the first example of DMSO reduction via an electron shuttle. Several Thermococcales species also exhibited enhanced growth coupled with DMSO reduction, probably by disposing of excess reducing power rather than conserving energy.

Production and purification of high-titer foamy virus vector for the treatment of leukocyte adhesion deficiency

Compared to other integrating viral vectors, foamy virus (FV) vectors have distinct advantages as a gene transfer tool, including their nonpathogenicity, the ability to carry larger transgene cassettes, and increased stability of virus particles due to DNA genome formation within the virions. Proof of principle of its therapeutic utility was provided with the correction of canine leukocyte adhesion deficiency using autologous CD34+ cells transduced with FV vector carrying the canine CD18 gene, demonstrating its long-term safety and efficacy. However, infectious titers of FV-human(h)CD18 were low and not suitable for manufacturing of clinical-grade product. Herein, we developed a scalable production and purification process that resulted in 60-fold higher FV-hCD18 titers from ~1.7 × 104 to 1.0 × 106 infectious units (IU)/ml. Process development improvements included use of polyethylenimine-based transfection, use of a codon-optimized gag, heparin affinity chromatography, tangential flow filtration, and ultracentrifugation, which reproducibly resulted in 5,000-fold concentrated and purified virus, an overall yield of 19 ± 3%, and final titers of 1–2 × 109 IU/ml. Highly concentrated vector allowed reduction of final dimethyl sulfoxide (DMSO) concentration, thereby avoiding DMSO-induced toxicity to CD34+ cells while maintaining high transduction efficiencies. This process development results in clinically relevant, high titer FV which can be scaled up for clinical grade production.

Electrochemical evidence that pyranopterin redox chemistry controls the catalysis of YedY, a mononuclear Mo enzyme

A long-standing contradiction in the field of mononuclear Mo enzyme research is that small-molecule chemistry on active-site mimic compounds predicts ligand participation in the electron transfer reactions, but biochemical measurements only suggest metal-centered catalytic electron transfer. With the simultaneous measurement of substrate turnover and reversible electron transfer that is provided by Fourier-transformed alternating-current voltammetry, we show that Escherichia coli YedY is a mononuclear Mo enzyme that reconciles this conflict. In YedY, addition of three protons and three electrons to the well-characterized "as-isolated" Mo(V) oxidation state is needed to initiate the catalytic reduction of either dimethyl sulfoxide or trimethylamine N-oxide. Based on comparison with earlier studies and our UV-vis redox titration data, we assign the reversible one-proton and one-electron reduction process centered around +174 mV vs. standard hydrogen electrode at pH 7 to a Mo(V)-to-Mo(IV) conversion but ascribe the two-proton and two-electron transition occurring at negative potential to the organic pyranopterin ligand system. We predict that a dihydro-to-tetrahydro transition is needed to generate the catalytically active state of the enzyme. This is a previously unidentified mechanism, suggested by the structural simplicity of YedY, a protein in which Mo is the only metal site.

Assessment of DFT methods for computing activation energies of Mo/W-mediated reactions.

Using high level ab initio coupled cluster calculations as reference, the performances of 15 commonly used density functionals (DFs) on activation energy calculations for typical Mo/W-mediated reactions have been systematically assessed for the first time in this work. The selected representative Mo/W-mediated reactions cover a wide range from enzymatic reactions to organometallic reactions, which include Mo-catalyzed aldehyde oxidation (aldehyde oxidoreductase), Mo-catalyzed dimethyl sulfoxide (DMSO) reduction (DMSO reductase), W-catalyzed acetylene hydration (acetylene hydratase), Mo/W-mediated olefin metathesis, Mo/W-mediated olefin epoxidation, W-mediated alkyne metathesis, and W-mediated C-H bond activation. Covering both Mo- and W-mediated reactions, four DFs of B2GP-PLYP, M06, B2-PLYP, and B3LYP are uniformly recommended with and without DFT empirical dispersion correction. Among these four DFs, B3LYP is notably improved in performance by DFT empirical dispersion correction. In addition to the absolute value of calculation error, if the trend of DFT results is also a consideration, B2GP-PLYP, B2-PLYP, and M06 keep better performance than other functionals tested and constitute our final recommendation of DFs for both Mo- and W-mediated reactions.