Marine gas hydrate is widely distributed in clayey silt sediments, which have high clay content and low permeability. The decomposition of natural gas hydrate will cause the mechanical failure of the reservoir and the decrease of pore water salinity, inducing the migration of clay minerals to clog the pore throat, which has a significant impact on the production efficiency of natural gas hydrate. In this work, the migration behaviour of illite in clayey silt sediments driven by pore water under the depressurization of hydrate was studied through pressure difference, pore throat and content changes. We studied the migration process of silt, excluding the interference of synergistic migration of silt and illite, and then studied the migration of illite under the change of flow rate and salinity. The results show that illite will migrate before silt and that critical flow rate and critical salinity exist. The flow rate mainly affects the torque generated by the forces detaching the illite particles. Illite particle detachment will occur if the flow rate exceeds the critical value and the torque balance is disrupted, and then the pore throat is clogged. There are two effects of salinity decrease on illite migration. Above the critical salinity, the expansion of the pore throat due to decomposition has a significant effect on illite migration. Below the critical salinity, the increase of the diffuse electric double layer thickness and the electrostatic repulsion will lead to an increase of the particle concentration in the pore water, making clogging more likely to occur even at low flow rates. This work suggests that clay migration has a complex impact on the development of clayey silt hydrate, and helps to consider the reasonable combination of saturation and production rate when designing a development plan to reduce the impact of permeability decline due to continuous pore throat clogging on development efficiency.