Different Areas Of China Research Articles

Biology and genetic diversity of Candida krusei isolates from fermented vegetables and clinical samples in China

ABSTRACT Candida krusei, also known as Pichia kudriavzevii, is an emerging non-albicans Candida (NAC) species causing both superficial and deep-seated infections in humans. This fungal pathogen is inherently resistant to the first-line antifungal drug, fluconazole, and is widely distributed in natural environments such as soil, foods, vegetables, and fruits. In this study, we collected 86 C. krusei strains from clinical settings and traditional fermented vegetables from different areas of China. Compared to C. krusei strains from fermented vegetables, clinical isolates exhibited a higher ability to undergo filamentation and biofilm development, which could facilitate its host colonization and infections. Isolates from fermented vegetables showed higher resistance to several antifungal drugs including fluconazole, voriconazole, itraconazole, amphotericin B, and caspofungin, than clinical strains, while they were more susceptible to posaconazole than clinical strains. Although C. krusei has been thought to be a diploid organism, we found that one-fourth of clinical strains and the majority of isolates from fermented vegetables (87.5%) are triploid. Whole-genome sequencing and population genetic analyses demonstrated that isolates from clinical settings and fermented food are genetically associated, and distributed across a wide range of genetic clusters. Additionally, we found that six nucleotide substitutions at the promoter region of the ABC11 gene, encoding a multidrug efflux pump, could play a critical role in antifungal resistance in this species. Given the ubiquitous distribution of C. krusei strains in fermented vegetables and their genetic association with clinical strains, a One Health approach will be necessary to control the prevalence of this pathogen.

Resting Cysts of the Toxic Dinoflagellate Gymnodinium catenatum (Dinophyceae) Ubiquitously Distribute along the Entire Coast of China, with Higher Abundance in Bloom-Prone Areas

Blooms of Gymnodinium catenatum have occurred occasionally in different areas of China and caused tremendous economic loss and even threatened human health. Not only is G. catenatum an important harmful-algal-bloom (HAB)-causing species, but also the only gymnodinioid dinoflagellate known to produce paralytic shellfish poisoning toxins (PSTs). Due to the germination of resting cysts, which often initiates blooms, the distribution and abundance of cysts in sediments and particularly the confirmation of cyst beds are important information for understanding and predicting dinoflagellate blooms. In this research, 199 sediment samples were collected from China’s coastal seas, ranging from the Beidaihe in the Bohai Sea (BS) to the southernmost sample from the Nansha Islands of the South China Sea (SCS). TaqMan quantitative PCR (qPCR) assays with species-specific primers and probes were developed to specifically detect the distribution and abundance of cysts in the 199 samples. The detection revealed that G. catenatum cysts were widely present in the sediments (126 of the 199 samples), with 93.55%, 74.65%, 42.37%, and 50% of the samples detected positively from the BS, YS, ECS and SCS, respectively, and covering the vast sea area from Nansha Islands to the Beidaihe area. The single-cyst morpho-molecular identification in the samples from Beidaihe confirmed the existence of G. catenatum cysts in the BS, and the positive detections of G. catenatum cysts using the qPCR methods. While G. catenatum cysts were widely distributed in all four seas of China, the average abundance was relatively low (1.0 cyst per gram of wet sediment). Three samples from the East China Sea (ECS), however, contained G. catenatum cysts at a relatively higher level (23 cysts g−1 wet sediment) than other sea areas, suggesting a pertinence of cyst abundance to the frequent occurrences of G. catenatum blooms in the area during recent years. Collectively, for G. catenatum being such an important toxic and HAB-causing species globally, the ubiquitous distribution of its cysts along the coastal waters of China and higher abundance in the bloom-prone areas warns us of a risk that cyst beds, although currently low in abundance, may seed HABs in any and many sea areas of China at any forthcoming year, and particularly those areas with records of frequent HABs outbreaks in the past.

Mortality and disease burden of oral cancer in China: a time-trend analysis on the China Death Surveillance Database from 2006 to 2021

BackgroundOral cancer is one of the most common cancers in China and seriously threaten life and health of Chinese people. We analysed the trends and disparities of oral cancer mortality rates and the disease burden of oral cancer in China from 2006 to 2021 to provide a reference for its prevention and control.MethodsAnnual death data for oral cancer was gleaned from the China Death Surveillance Database. The age-standardized mortality rate (ASMR), annual percentage change (APC), and average APC (AAPC) were used to analyze the trend of mortality. Loss of life expectancy (LLE) and years of life lost (YLL) were adopted to assess disease burden.ResultsFrom 2006 to 2021, the overall ASMR of oral cancer lightly declined (AAPC: − 0.97%; 95% CI: − 1.89%, − 0.04%), and the similar trend was observed among females (AAPC: − 1.22%; 95% CI: − 1.89%, − 0.55%). The ASMR of males was 2.31–3.16 times higher than that of females per year. The median of LLE for overall, males and females caused by oral cancer from 2006 to 2021 were 0.05, 0.06 and 0.03 years, respectively. There was a decrease of standardized YLL rate from 2006 to 2021 for overall (AAPC: − 1.31%, 95% CI: − 2.24% ~ − 0.37%) and for female (AAPC: − 1.63%, 95% CI: − 2.30% ~ − 0.95%). ASMR in urban areas was 1.02–1.28 times higher than that in rural areas from 2006 to2011, but 0.85–0.97 times lower in urban areas than that in rural areas from 2018 to 2021. The disease burden was higher in urban areas than in rural areas in 2006, whereas the reverse was observed in 2021.ConclusionsThere are severe health gaps and disparities in trends between sexes and different areas in China. Males and rural populations need to be focused on targeted interventions for the main influencing factors.

Establish real-time corrosion map through dual-driven data and knowledge neural network

The real-time corrosion map is an effective method for studying atmospheric corrosion. Traditional coupons exposure data are difficult to establish the real-time corrosion maps due to the long experimental period. The Atmospheric Corrosion Monitor (ACM) technology, which provides continuous and real-time data, can be used to support the establishment of real-time corrosion maps. However, the high cost restricts the extensive application of ACM sensor. Additionally, power outages, equipment failures and lifespan limitations are limited factors for ACM sensors to provide sufficient data for unlimited period. It is an unsolved problem to generate a real-time corrosion map based on the ACM data from few locations and limited period. This research work focusses on establishing a new method, the dual-driven data and knowledge neural network (DKNN) model, to establish a real-time corrosion map. Firstly, A DKNN framework that includes multi-objective optimization loss function is constructed by the corrosion data which is amplified by common corrosion knowledge. Next, the DKNN model is evaluated by comparing the consistency between the corrosion electric quantity map and corrosion depth maps from the coupons exposure data. Finally, this paper provides a month-based and a quarter-based corrosion electric quantity maps for different areas in China. This approach could provide a solution to establish real-time corrosion map based on limited ACM data.

A Variational Mode Decomposition Analysis and Prediction Simulation of DO in the Water Environment of the Chengdu Area, China

DO is an important index to characterize environmental water quality. The time series fluctuation of DO can be analyzed via frequency band decomposition, which is very valuable for water quality simulations. In this paper, DO in the Chengdu area of China was studied using variational mode decomposition with daily meteorological data and water quality data from 2020 to 2022. After variable decomposition, the DO data were first decomposed into different frequency band signals named IMF1, IMF2, IMF3, IMF4, and IMF5. IMF1 represented the low-frequency signal with long-term trend characteristics of the data. IMF2 to IMF5 represented the high-frequency signal with short-term mutation characteristics of the data. By combining the variable decomposition results with the correlation analysis, it was found that the long-term trend characteristics of DO are affected by the superposition of meteorological factors, hydrological factors, and water pollution factors but have a weak correlation with any single determining factor. The air temperature, water temperature, phosphorus, air pressure, pH value, chemical oxygen demand, and nitrogen were relatively strongly correlated with the long-term trend characteristics of DO. The short-term mutation characteristics of DO were mainly determined using the characteristics of the water body itself, while the influence of the meteorological factors could basically be ignored. The water temperature, pH value, and eutrophication were the biggest influencing factors. Then, a predictive framework combining frequency division with a deep learning model or a machine learning model was constructed to predict DO. The predicted results of GRU, random forest, and XGBoost with and without the framework were compared. It was shown that, after removing the interference factors with correlations less than 0.3, the predicted value of DO was much closer to the actual value. The XGBoost and random forest models with decomposed signals had a high degree of simulation fitting and could be used to predict DO in the Chengdu area. The above research approach can be applied to further explore the prediction of various pollution factors in different areas of China.

Cultural heritage tourism at film-related tourism sites: staged and existential authenticity at Hengdian World Studios

ABSTRACT The trend of incorporating culture and heritage into various aspects of tourism, such as film-related tourism, is gaining momentum. In addition to the film-related attractions, film-related tourism can encourage tourists’ engagement with cultural heritage tourism and consumption of heritage products at the destination. Examining the case of Hengdian World Studios (China), the world’s largest outdoor film studio and film shooting base, this paper discusses how cultural heritage tourism is induced at a film-related tourism destination as well as how the tourism destination represents authenticity and how tourists perceive such representations. Hengdian World Studios simulates several real heritage sites in different areas of China for screen media productions as well as for tourist consumption. This paper examines the concepts of ‘staged authenticity’ (MacCannell [1973]. Staged authenticity: Arrangements of social space in tourist settings. American Journal of Sociology, 79(3), 589–603. https://doi.org/10.1086/225585) and ‘existential authenticity’ (Wang [1999]. Rethinking authenticity in tourism experience. Annals of Tourism Research, 26(2), 349–370. https://doi.org/10.1016/s0160-7383(98)00103-0) in the context of tourism studies to understand cultural heritage tourism at film-related tourism sites. The discussion is based on research undertaken at Hengdian World Studios between 2018 and 2023 drawing on ethnographic methods and online interviews with 50 tourists. This paper contributes to the understanding of authenticity issues in tourism studies from different perspectives and the interconnections between film-related tourism and cultural heritage tourism.

C-E Translation Analysis of the Article Artistic Characteristics of Opera Character Paper-Cuts in Xinjiang in the CEA Framework

The Chinese government promotes the spreading of Chinese culture worldwide to enhance the soft power of China internationally. In this circumstance, translation of folk culture holds great significance since it constitutes an integeral part of cultural heritage, and through translation, a wider audience can appreciate these diverse cultures in different areas of China and better understand the Chinese culture in general. Based on the background of rural cultural reconstruction and the urgent situation of inheriting the precious intangible cultural heritage, the student translator took the article On the Artistic Characteristics of Opera Character paper-cuts in Xinjiang Area of Shanxi Province as the source text for her translation project. The framework of “Comprehension, Expression and Adaptation” is chosen to analyse the translation process: how the translator solved the problems encountered in understanding the text in source language, expressing the similar meaning in target language and adaptations made to bridge the cultural gap between the two languages.

Unveiling the power of teacher credibility and care in learners’ motivation through the lens of rhetorical/relational and broaden-and-build theory

In light of the challenge posed by the need to sustain learners' motivation within educational environments, it is imperative to investigate the issues that contribute to its enhancement. To enhance learners' motivation, scholarly literature suggests that educators have a remarkable function in this regard, with various facets linked with teachers such as their behaviors. The significance of teacher credibility and care in the classroom has been established in academic literature. Nevertheless, there is a lack of research on the importance of these two constructs in predicting students' motivation using the two significant theories of motivation, namely Broaden-and-Build and Rhetorical/Relational. To address the gap, 696 students from eight different areas of China were asked to complete three different questionnaires measuring motivation, credibility, and teacher care. The data was then analyzed using structural equation modeling (SEM) and the results revealed that the credibility and care of teachers have a significant impact on students' motivation. Indeed, a robust positive correlation (r = 0.62, p < 0.05) is observed between teacher credibility and student motivation. This indicates that elevated teacher credibility is significantly associated with higher levels of students' motivation. Furthermore, a strong positive correlation (r = 0.68, p < 0.05) is also identified between teacher care and students' motivation. This suggests that increased teacher care is significantly linked to higher levels of students' motivation. In addition, both credibility and care could predict learners' motivation, but teacher care was a better predictor representing about 86 % of changes in motivation. The results of the study were discussed, along with their potential impact on teaching practices, and recommendations for future research were also offered.

Iodine Nutrition, Thyroid-stimulating Hormone, and Related Factors of Postpartum Women from three Different Areas in China: A Cross-sectional Survey*

ObjectiveStudies on the relationship between iodine, vitamin A (VA), and vitamin D (VD) and thyroid function are limited. This study aimed to analyze iodine and thyroid-stimulating hormone (TSH) status and their possible relationships with VA, VD, and other factors in postpartum women. MethodsA total of 1,311 mothers (896 lactating and 415 non-lactating) from Hebei, Zhejiang, and Guangxi provinces were included in this study. The urinary iodine concentration (UIC), TSH, VA, and VD were measured. ResultsThe median UIC of total and lactating participants were 142.00 µg/L and 139.95 µg/L, respectively. The median TSH, VA, and VD levels in all the participants were 1.89 mIU/L, 0.44 µg/mL, and 24.04 ng/mL, respectively. No differences in the UIC were found between lactating and non-lactating mothers. UIC and TSH levels were significantly different among the three provinces. The rural UIC was higher than the urban UIC. Obese mothers had a higher UIC and a higher prevalence of excessive TSH. Higher UICs and TSHs levels were observed in both the VD deficiency and insufficiency groups than in the VD-sufficient group. After adjustment, no linear correlation was observed between UIC and VA/VD. No interaction was found between vitamins A/D and UIC on TSH levels. ConclusionThe mothers in the present study had no iodine deficiency. Region, area type, BMI, and VD may be related to the iodine status or TSH levels.

Comparison of Intestinal Bacteria of Procambarus clarkii Farmed in Various Rice Paddy Regions.

The aim of this study was to assess the regional differences of Procambarus clarkii through analyzing gut microbiota in specimens from different areas in China. The P. clarkii were collected from ten integrated rice-crayfish farming systems locating across ten major producing areas as follows: Feixi (FX), Suqian (SQ), Yangzhou (YZ), Xuyi (XY), Qianjiang (QJ), Jianli (JL), Honghu (HH), Yueyang (YY), Changsha (CS), and Nanxian (NX). The composition of gut microbiota was assessed by analyzing 16S rRNA sequences. The PCoA results indicated significant differences in microbial community composition among the ten areas (R = 0.999, p = 0.001). The intestinal microbial diversity in P. clarkii cultured in rice fields from YY and CS exceeded that of other regions, with NX displaying the least diversity. At the phylum level, Proteobacteria were most abundant in HH, while Firmicutes showed increased relative abundances in FX and SQ, contrasted by lower relative abundances of Bacteroidetes in these areas. At the genus level, Ralstonia, Amedibacillus, Bacteroides, Anaerorhabdus, and Dysgonomonas were the dominant bacteria. The bacterial co-occurrence networks analysis revealed that the community structures in locations FX, SQ, XY, HH, and NX were comparatively simplistic, whereas those in the YZ, QJ, JL, YY, and CS regions displayed as more complex. In summary, the diversity and relative abundance of intestinal bacteria exhibits regional variability. These findings can offer theoretical data for evaluating the quality of P. clarkii aquaculture.

Diversity of species and geographic distribution of tick-borne viruses in China.

Tick-borne pathogens especially viruses are continuously appearing worldwide, which have caused severe public health threats. Understanding the species, distribution and epidemiological trends of tick-borne viruses (TBVs) is essential for disease surveillance and control. In this study, the data on TBVs and the distribution of ticks in China were collected from databases and literature. The geographic distribution of TBVs in China was mapped based on geographic locations of viruses where they were prevalent or they were detected in vector ticks. TBVs sequences were collected from The National Center for Biotechnology Information and used to structure the phylogenetic tree. Eighteen TBVs from eight genera of five families were prevalent in China. Five genera of ticks played an important role in the transmission of TBVs in China. According to phylogenetic analysis, some new viral genotypes, such as the Dabieshan tick virus (DTV) strain detected in Liaoning Province and the JMTV strain detected in Heilongjiang Province existed in China. TBVs were widely distributed but the specific ranges of viruses from different families still varied in China. Seven TBVs belonging to the genus Orthonairovirus of the family Nairoviridae such as Nairobi sheep disease virus (NSDV) clustered in the Xinjiang Uygur Autonomous Region (XUAR) and northeastern areas of China. All viruses of the family Phenuiviridae except Severe fever with thrombocytopenia syndrome virus (SFTSV) were novel viruses that appeared in the last few years, such as Guertu virus (GTV) and Tacheng tick virus 2 (TcTV-2). They were mainly distributed in the central plains of China. Jingmen tick virus (JMTV) was distributed in at least fourteen provinces and had been detected in more than ten species of tick such as Rhipicephalus microplus and Haemaphysalis longicornis, which had the widest distribution and the largest number of vector ticks among all TBVs. Parainfluenza virus 5 (PIV5) and Lymphatic choriomeningitis virus (LCMV) were two potential TBVs in Northeast China that could cause serious diseases in humans or animals. Ixodes persulcatus carried the highest number of TBVs, followed by Dermacentor nuttalli and H. longicornis. They could carry as many as ten TBVs. Three strains of Tick-borne encephalitis (TBEV) from Inner Mongolia Province clustered with ones from Russia, Japan and Heilongjiang Province, respectively. Several SFTSV strains from Zhejiang Province clustered with strains from Korea and Japan. Specific surveillance of dominant TBVs should be established in different areas in China.

Decoding the green supply chain: Education as the key to economic growth and sustainability.

The value of environmental safeguarding is rising in both private and public spheres. What is meant by the term "green supply chain management" (GSCM)? It is minimizing the negative effects of a company's operations on the natural world. Particularly in the research and academic disciplines of the expanding economy of the China region, the concept of the intersection of green supply chain management and sustainable development is dissected at a foundational level. However, there has been little attention paid to how GSCM, GHC, environmental performance, and economic performance all relate to one another. This study fills that void in the literature by giving hard data to encourage businesses in the China area to adopt GHC (green human capital) and SCM (sustainable supply chain management) in order to significantly improve their environmental and economic outcomes. To better understand the interplay between these ideas, we constructed a conceptual framework. The information was gathered using a survey consisting of questionnaires. Manufacturing companies from ten (10) different areas in China provided the 470 responses. The information was analyzed using structural equation modeling (SEM). Research shows that green human capital and green supply chain management have a beneficial influence on economic performance but no discernible effect on environmental outcomes. The results also demonstrate that green supply chain management is an effective act as a mediator between environmental performance and economic performance, with a beneficial effect on both. An initial conclusion may be made that bettering the green human capital stock was more important for China's green economy's growth than bettering the human capital structure. Research like this helps fill out the picture of the green economy and informs policy decisions at the national level.

DNA barcode screening, identification of germplasm resources, and analysis of genetic diversity of Anemarrhena asphodeloides

Anemarrhena asphodeloides is a common medicinal material used in clinical prescriptions and Chinese patent medicine. In this study, the Illumina platform was used to obtain the chloroplast genome sequences of seven kinds of A. asphodeloides from different areas. The specific DNA barcodes were screened by comparative genomics analysis, and the DNA barcodes were used to identify the germplasm resources and analyze the genetic diversity of A. asphodeloides samples from different areas in China. All the seven chloroplast genomes had a ring structure. The total length was 156 801-156 930 bp, and 113 genes were annotated, including 79 protein-coding genes, 30 tRNA genes, and four rRNA genes. The comparative genomics analysis showed that rps16, trnG-GCC, atpF, rpoB, ycf3, rpl16, ndhF, trnS-GCU＿trnG-GCC, petN-psbM, and ndhF-rpl32 were potential candidates for specific DNA barcodes of A. asphodeloides. In this study, the second intron of ycf3 and atpF intron sequences with a sequence length of 700-800 bp and easy amplification were selected for polymerase chain reaction(PCR) amplification and sequencing of 594 samples from 26 areas. The sequence analysis showed that six and eight haplotypes of ycf3 and atpF sequences could be identified, respectively, and 17 haplotypes could be identified by combined analysis of the two sequences, which were named Hap1-Hap17. The haplotype diversity(H_d), nucleotide diversity(P_i), and genetic distance of A. asphodeloides in 26 populations were 0.68, 0.93×10~(-3), and 0-0.003 1, respectively, indicating that the genetic diversity within the species of A. asphodeloides is rich. The intermediary adjacent network analysis showed that Hap5 was the oldest haplotype, which was mainly distributed in Yixian county of Baoding, Hebei province, Hequ county of Xinzhou, Shanxi province, and Xiangfen county of Linfen, Shanxi province. This study has important guiding significance for the identification of A. asphodeloides species, the protection and development of germplasm resources, and the identification of production areas, and it provides a research basis for further revealing the genetic evolution law of A. asphodeloides.

Geographical specificity of metabolomic traits among Amomum villosum Lour. Fruits from different areas in China

Amomum villosum Lour. is a common functional food that promote intestinal health. Yangchun City is considered the best habitat for A. villosum among all producing areas in China. However, no studies have shown a difference between Yangchun and other producing areas in terms of the metabolic profiles of A. villosum fruits. The current study analyzed the metabolic profiles of A. villosum fruit samples cultivated in five representative producing areas, and explored the associations with environmental factors. A total of 969 metabolites were identified using liquid chromatography-tandem mass spectrometry (LC-MS/MS), and the potential biomarker clusters re-composed with 5 metabolites (indole-5-carboxylic acid, glutaric acid, afzelechin, 3-hydroxyanthranilic acid, and adenosine 5-diphosphate) (AUCs = 0.813–1.0) were shown to distinguish samples from different areas. OPLS-DA was performed to identify region-specific metabolites in each producing area. For the geo-authentic area (Yangchun), the prominent metabolites were mainly related to anti-inflammatory effects. Moreover, 11 environmental factors were significantly associated with the metabolites in A. villosum fruits (p < 0.05), and latitude was the highest correlation factor (r2 = 0.351, p = 0.004). This work provides a practical strategy for detecting adulterations of the geo-authentic habitat of A. villosum, and offers a scientific basis for the assessment of habitat suitability and introduction of high-quality A. villosum.

Identifying bioclimatic techniques for sustainable low-rise high-density residential units: Comparative analysis on the ventilation performance of vernacular dwellings in China

Vernacular dwellings equipped with bioclimatic techniques, used to form low-rise high-density communities in most Asian regions, are of great value for the development of modern sustainable residential units. Natural ventilation is a major concern mainly because of its climate-related characteristics of improving indoor thermal comfort at extremely low ecological costs. Therefore, this study applies a comparative analysis coupled with field investigations and numerical simulations to the ventilation technologies of vernacular dwellings in different areas of China. Geometric prototypes of typical vernacular dwellings in six climate zones were generated based on field measurements. Computational Fluid Dynamic (CFD) simulations were conducted in OpenFOAM with the Reynolds Averaged Navier-Stokes (RANS) modeling approach and the RNG k-ε turbulence model. A correlation analysis of the building elements and climate factors was also performed to determine the relevant parameters affecting ventilation performance. The results revealed different emphases and verified strategies for wind environment regulation based on different local climates. Six physical parameters, namely wind projection angle, orientation, wind inclination angle, window-to-wall ratio, top-to-bottom ratio, and height-to-width ratio of the atrium, are considered to be closely related to ventilation efficiency. The findings from the current research provide quantitative evidence of the effectiveness of natural ventilation technologies of vernacular dwellings and contribute to comprehensive knowledge for designing sustainable low-rise high-density residential units with optimum ventilation functions.

Multicenter analysis of epidemiological and clinical features of pediatric acute lower respiratory tract infections associated with common human coronaviruses in China, 2014–2019

The common human coronaviruses (HCoVs) HCoV-229E, HCoV-OC43, HCoV-NL63, and HCoV-HKU1 which are members of the coronavirus family are long co-existed with humans and widely distributed globally. Common HCoVs usually cause mild, self-limited upper respiratory tract infections (URTI), and also associated with lower respiratory tract infections (LRTI), especially in children. However, there are little multicentre studies have been conducted in children of several different areas in China, and the epidemic potential of common HCoVs remains unclear. Understanding of the common HCoVs is valuable for clinical and public health. Herein, we retrospectively analysed the medical records of children with acute lower respiratory tract infection admitted to 9 hospitals from different regions in China from 2014 to 2019. Of the 124 patients who tested positive for coronaviruses, OC43 was the predominant type, accounting for 36.3% (45/124) of the detections. Children aged ≤ 6 months and 12–23 months had the highest detection rate of common HCoVs, and the detection rate gradually declined after 2 years old. These four HCoVs could be detected all year round. Among the areas of our study, the overall positive rate was higher in southern China, especially in Guangzhou (29/124, 23.4%). Moreover, common HCoV-positive patients were codetected with 9 other common respiratory pathogens. 229E (11/13, 84.6%) was the most frequently associated with codetection, with EV/RhV was the most frequently codetected virus. Cough (113/124, 91.1%) and fever (73/124, 58.9%) were the most common symptoms of common HCoVs infection.

Improving photochemical indicators for attributing ozone sensitivities in source apportionment analysis

Comprehensive Air Quality Model with extensions (CAMx)–Decoupled Direct Method (DDM) simulations of first-order ozone (O3) sensitivity to nitrogen oxides (NOx) and volatile organic compounds (VOCs) emissions were performed and combined with modelled PH2O2/PHNO3 ratios to obtain a range of thresholds for determining O3-sensitivity regimes for different areas of China. Utilising the new threshold ranges for photochemical indicators, the method for determining O3 formation in the Ozone Source Apportionment Technology (OSAT) module within CAMx was improved by a dynamically varied threshold of PH2O2/PHNO3 ratio. The O3 concentration contributions in the newly added transition regime were apportioned to NOx and VOCs emissions in proportion to the relationship between the PH2O2/PHNO3 ratio and first-order O3 sensitivity. The source contributions of O3 concentrations from different emission sectors from June to September 2019 were compared using the original and improved CAMx-OSAT. The results showed that the O3 concentration contributions changed significantly in the NOx-limited regime, with a maximum decrease of 21.89%, while the contributions increased by up to 7.57% in the VOC-limited regime, and were within 15 µg/m3 in the transition regime. The modified OSAT module enabled a more sophisticated attribution of O3 to precursor emissions and may have far-reaching implications for informing O3 pollution control policy.

Six Express Sequence Tag-Simple Sequence Repeat Primers Reveal Genetic Diversity in the Cultivars of Three Zanthoxylum Species.

Zanthoxylum (Sichuan pepper), with its rich cultivars, has long been widely cultivated in China for its unique seasoning and medicinal uses, but most of its cultivars have similar morphological characteristics. Therefore, we hypothesized that the genetic diversity of Zanthoxylum cultivars is low because of their apomixis and long cultivation history. In this study, we aimed to investigate the genetic diversity of three Zanthoxylum species on the cultivar level based on express sequence tag-simple sequence repeat (EST-SSR) primers. In total, 121 samples of three Zanthoxylum species (Z. bungeanum, Z. armatum and Z. piperitum) were collected from different areas in China for genetic diversity analysis. A total of six specificity and polymorphism EST-SSR primers, which we selected from among 120 primers based on two transcriptomes (Z. bungeanum, Z. armatum) in our earlier study, were used to evaluate genetic diversity based on capillary electrophoresis technology. The results of our analysis using the unweighted pair group method with arithmetic mean (UPGMA) indicated that most of the samples are clustered in one clade in the UPGMA dendrogram, and the average genetic distance was 0.6409. Principal component analysis (PCA) showed that Z. piperitum may have a closer genetic relationship with Z. bungeanum than with Z. armatum. An analysis of molecular variation (AMOVA) showed that the genetic variation mainly stemmed from individuals within populations; the genetic differentiation coefficient (PhiPT) was 0.429, the gene flow (Nm) between populations was 0.333, and the differences among populations were not significant (p > 0.001). For the intraspecific populations of ZB, the percentage of genetic variation was 53% among populations and 47% within populations, with non-significant differences between populations (p > 0.001). The genetic differentiation coefficient (PhiT) was 0.529, and the gene flow (Nm) was 0.223. For the intraspecific populations of ZA, the results indicated that the percentage of genetic variation was 29% among populations and 71% within populations, with non-significant differences between populations (p > 0.001); the genetic differentiation coefficient (PhiPT) was 0.293, and the gene flow (Nm) was 0.223. Through genetic structure analysis (GSA), we predicted that these 121 samples belonged to two optimal subgroups, which means that all the samples probably originated from two gene pools. Above all, this indicated that the genetic diversity of the 121 Zanthoxylum samples was relatively low at both the species and cultivar levels, a finding which was consistent with our initial assumptions. This study provides a reference, with molecular-level data, for the further identification of Zanthoxylum species.

First report of Diplodia mutila causing canker and branch dieback of walnut trees in Xinjiang, China.

Walnut (Juglans regia L.) has become an important economic fruit tree in China. In April 2022, branch dieback was observed in 15-year-old walnut trees (cv Wen 185) in a commercial orchard in Aksu, Xinjiang, China (40°21'55''N, 80°1'48''E), with an incidence of 2% (4 out of 200 trees) of affected trees. The symptoms observed, included depressed and shrunken cankers, twigs and branches dieback. Cross-sections of diseased branches revealed dark-brown wedge-shaped lesions. To isolate the potential causal pathogen, four specimens were isolated from diseased branches, and small pieces taken from the edge of canker samples (0.5 × 0.5 cm), were disinfected by immersion in 75% ethanol for 30 s and 2% NaClO solution for 3 min, and rinsed three times with sterile water. The disinfected wood samples were then placed on potato dextrose agar (PDA) and incubated in the dark at 25°C for 2-3 days. Then, we applied the mycelial tip purification method and repeated this purification process until a single colony was formed. Four pure isolates (3-1-51A, W-2-54, K-1-43A, K-1-43B) developed white to white-gray fast-growing colonies with abundant aerial mycelium after seven days at 25°C on PDA and gradually became dark olive green over subsequent growth stages. Conidia production was then induced on 2% w/v water agar containing sterilized pine needles under near-U/V light (Alves et al., 2004). The conidia were initially hyaline, thick-walled, oblong to ovoid with one septum and a size range of 19.47-24.16 × 9.78-13.51 µm (n = 40). Based on morphological characteristics these isolates were tentatively identified as Diplodia mutila (Fr.) Mont. (Alves et al., 2004).To confirm the pathogen identified, the representative isolate 3-1-51A was amplified and sequenced using specific primer pairs (ITS1/ITS4, EF1-986/EF1-728E, BT2a/BT2b) to the internal transcribed spacer (ITS), translation elongation factor 1-alpha (TEF1-α), and beta-tubulin (TUB) (White et al. 1990; Carbone and Kohn 1999; O' Donnell and Cigelnik 1997), respectively. The sequences showed 100% similarity to two D. mutila strains CBS230.30 and CBS112553. Maximum likelihood analysis was performed based on a concatenated dataset (ITS + TEF1-α + TUB) gene using MEGA 11. 0 and isolate 3-1-51A formed a single clade with the reference ex-type of D. mutila. The isolate 3-1-51A was deposited into GenBank as OP006733, OP373140, and OP373139 for ITS, TEF1-α, and TUB, respectively. To fulfill Koch's postulates, pathogenicity tests were performed using isolate 3-1-51A on one-year-old healthy walnut branches cv. Wen 185 of walnut trees (n=5). Five twigs of healthy walnut branches were cleaned, submerged in 1% NaClO for 15 minutes and then dried. Then, a sterile hole punch (5mm in diameter) was used to create a wound in the middle of each walnut branch, and placing mycelial plugs(3 days old; 5 mm in diameter) and sealed with parafilm. An equal number of twigs inoculated with sterile agar plugs served as controls. On the 7th day after inoculation, dark brown coloration was developed on the branches with symptoms of shrinkage dryness, and dieback. D. mutila isolate was re-isolated only from the inoculated branches. In negative control twigs, lesions and re-isolated were absent, thus fulfilling Koch's postulates. D. mutila has been previously reported causing canker and branch dieback in walnut trees in Chile (Díaz et al. 2018) and California (Chen et al. 2014). Previously, D. seriata (Zhang et al. 2017), Botryosphaeria dothidea (Guo et al. 2016), Lasiodiplodia pseudotheobromae (Guo et al. 2016), Dothiorella gregaria (Liu et al. 1986) and Neofusicoccum parvum (Yu et al. 2015) have been identified on walnut trees in China. To our knowledge, this is the first report of canker and branch dieback caused by D. mutila in walnut trees in Xinjiang, China. Further studies are now required to better understand the etiology of canker and branch dieback on walnut trees from different areas in China.

First Report of Penicillium subrubescens Causing Root Rot of Knoxia roxburghii in China.

Knoxia roxburghii (syn. Knoxia valerianoides), locally known as 'Zi Daji', is a perennial herb that belongs to the Rubiaceae family, cultivated in different areas of China and recognized for its medicinal properties in traditional Chinese medicine (Chen et al. 2022). In 2021, root rot was observed during summer on K. roxburghii in Xiangyun and Dali, Yunnan Province (25°25'N, 100°40'E), China. Root rots were characterized by dark brown tissue from stem base to root, loss of vitality in tender leaves and wither. Three symptomatic root samples of K. roxburghii collected from different fields were rinsed with running water, and 0.5-1 cm2 fragments of diseased tissues were cut and surface-disinfested with 75% ethanol for 30 s, and 1% NaClO for 180 s. The fragments were then washed with sterile water, transferred to potato dextrose agar (PDA, 4.6%) and incubated at 28℃ in the dark for 3 days. A total of 13 isolates with consistent appearances were obtained by single spore isolation. These colonies on PDA showed gray and light brown obverse, and light green reverse after 10 days. The average growth rate was 3 mm per day. Conidia were nearly spherical or broadly elliptic, greyish-green, and 1.4-2.4×1.3-2.2 μm in size (n=50). The conidiophore has symmetrical or asymmetrical broom branches from the tip, with 2-4 small stems. The conidiophore branching patterns were predominantly biverticillate; stipes coarsely roughened, 80-210×2.6-3.0 μm; metulae were usually appressed verticils of 3-6, 6.4-12.5×1.6-3.0 μm; phialides were short and wide neck, 3.8-4.8×1.1-1.8 μm (n=30). The morphological characteristics of the fungus were identical to Penicillium (Mansouri et al. 2013). To further identify the isolate, one isolate (ByF10) was randomly selected for identification. DNA was extracted from mycelia using a simplified CTAB method. Primer pairs, ITS1/ITS4 and Bt2a/Bt2b were used to amplify the partial regions of rDNA internal transcribed spacer (ITS) and β-tubulin (TUB), respectively (White et al. 1990; Glass and Donaldson 1999). Blast searches showed that the sequences of ITS (OQ954757) and TUB (OQ970059) of isolate ByF10 were 99% (MH865456) and 100% (KC797611) identical with P. subrubescens CBS 130205 and CBS 129617, respectively. A concatenated phylogenetic tree (ITS+TUB) constructed using the maximum likelihood method showed that ByF10 was closely grouped next to isolates of P. subrubescens. Pathogenicity test was carried out using 1-year-old healthy seedlings of K. roxburghii cv. Yunji-1 growing on autoclaved soil (n=10). Ten plants were inoculated with mycelial blocks (5 mm2), which were taken from the colony margins of a 10-day-old culture (PDA) colony, and placed on the roots near the soil. Five control plants were inoculated with non-colonized PDA plugs. The pathogenicity test was repeated three times. All plants were kept at 25℃, 70% relative air humidity, and 12 h light/12 h regime dark for 35 days. After that period 95% of inoculated plants showed typical symptoms of root browning. P. subrubescens was only re-isolated from the inoculated plants, and identified based on morphological and molecular characteristics. No symptoms were observed in the controls. To the best of our knowledge, this is the first report of P. subrubescens causing root rot on K. roxburghii in China and the world.