Diel Periodicity Research Articles

Diel vertical migration rates of the dinoflagellate species Margalefidinium polykrikoides in a lower Chesapeake Bay tributary

Margalefidinium polykrikoides is a mixotrophic dinoflagellate harmful algal bloom (HAB) species that blooms annually in the lower Chesapeake Bay. M. polykrikoides undertakes a diel vertical migration (DVM) which may give it a competitive advantage over purely phototrophic organisms who cannot access deeper nutrient pools and allow it to form large toxic blooms. Laboratory-based estimates of M. polykrikoides’ DVM rates suggest that it is one of the fastest known dinoflagellate swimmers and understanding this behavior is likely important for modeling and predicting M. polykrikoides blooms. However, to date, no field-derived estimates of M. polykrikoides’ DVM rates have been made in the Chesapeake Bay. In this study, we conducted four targeted field experiments to investigate the DVM of M. polykrikoides in the Lafayette River, a sub-tributary of the Chesapeake Bay. Vertical profiles of chlorophyll a fluorescence collected at least every 2 h over diel periods were used to track the DVM of M. polykrikoides during blooms. The maximum observed DVM rate for M. polykrikoides was 2.5 m h−1, with mean DVM rates around 1.3 m h−1 for both ascents and descents. As in studies from other regions, our results show that M. polykrikoides’ ascent to/descent from the surface initiates before sunrise/sunset, suggesting phototaxis is not the primary trigger of their DVM. However, unlike in other studies where M. polykrikoides was observed to modulate its DVM to avoid excessively warm temperatures (≥30°C), we do not observe active thermotaxic avoidance, despite ambient temperatures exceeding their optimal threshold.

Resource selection by a megaomnivore in a marine foraging habitat

AbstractHabitat‐based approaches to animal conservation are bolstered by an understanding of resource selection, that is, use of resources (i.e., habitat features) relative to their availability in the environment. Quantifying resource selection is especially valuable when data characterizing animal space use are limited, as is often the case with mobile and/or cryptic species. Documenting associations with habitat features can better inform management in space in time, while also revealing key insight into movement ecology and behavior. Here, we evaluate resource selection by a megaomnivore whose highly mobile nature within marine habitats has resulted in an incomplete understanding of drivers of space use. We used satellite telemetry to track 29 green turtles (Chelonia mydas) from an eastern Pacific foraging aggregation in San Diego Bay, California, USA during 2013–2023. Tracking produced 5023 Fastloc‐GPS points which we used to model selection for local environmental resources relative to their availability. We employed logistic models to evaluate associations with seagrass, bathymetry, and water temperatures, implementing a framework that additionally allowed us to explore the roles of season, diel period, and turtle body size. Our methods demonstrate an approach for down‐weighting observations according to assumed telemetry error and autocorrelation. Results from fine‐scale resource selection models provide evidence that green turtles in San Diego Bay select for eelgrass meadows (Zostera marina), particularly during the warmest months of the year, but the strength of this selection changes from day to night. We additionally found day–night shifts in depth and temperature selection that changed with turtle body size and season. We discuss these findings in the context of diel patterns in resting and foraging behavior in addition to seasonal changes in thermally sensitive metabolic rates. Our study documents resource associations and provides quantitative information for the management of sea turtle foraging populations and their habitats. We offer key insight into habitat use by green turtles in the eastern Pacific at a pivotal time when multiple indicators point to population growth and expansion within the region.

Isotopic steady state or non-steady state transpiration? Insights from whole-tree chambers.

Unravelling the complexities of transpiration can be assisted by understanding the oxygen isotope composition of transpired water vapour (δE). It is often assumed that δE is at steady state, thereby mirroring the oxygen isotope composition of source water (δsource), but this assumption has never been tested at the whole-tree scale. This study utilized the unique infrastructure of 12 whole-tree chambers enclosing Eucalyptus parramattensis E.C.Hall trees to measure δE along with concurrent temperature and gas exchange data. Six chambers tracked ambient air temperature and six were exposed to an ambient +3°C warming treatment. Day time means for δE were within 1.2‰ of δsource (-3.3‰) but varied considerably throughout the day. Our observations show that E. parramattensis trees are seldom transpiring at isotopic steady state over a diel period, but transpiration approaches source water isotopic composition over longer time periods.

Diel metatranscriptomes capture cyanobacteria-dominated Lake Erie community response to episodic events.

Here, we report on the raw and coassembled metatranscriptomes of 39 Lake Erie surface (1.0 m) water samples collected over a 2-day diel period encompassing episodic weather and bloom events. Preliminary taxonomic annotations and read mappings revealed that Microcystis spp. accounted for up to ~47% of the transcriptionally active community.

Scale-dependence in elk habitat selection for a reintroduced population in Wisconsin, USA.

Habitat selection is a critical aspect of a species' ecology, requiring complex decision-making that is both hierarchical and scale-dependent, since factors that influence selection may be nested or unequal across scales. Elk (Cervus canadensis) ranged widely across diverse ecoregions in North America prior to European settlement and subsequent eastern extirpation. Most habitat selection studies have occurred within their contemporary western range, even after eastern reintroductions began. As habitat selection can vary by geographic location, available cover, season, and diel period, it is important to understand how a non-migratory, reintroduced population in northern Wisconsin, USA, is limited by the lack of variation in topography, elevation, and vegetation. We tested scale-dependent habitat selection on 79 adult elk from 2017 to 2020 using resource selection functions across temporal (i.e., seasonal) and spatial scales (i.e., landscape and home range). We found that selection varied both spatially and temporally, and elk selected areas with the greatest potential to influence fitness at larger scales, meaning elk selected areas closer to escape cover and further from "risky" features (e.g., annual wolf territory centers, county roads, and highways). We found stronger avoidance of annual wolf territory centers during spring, suggesting elk were selecting safer habitats during calving season. Elk selected habitats with less canopy cover across both spatial scales and all seasons, suggesting that elk selected areas with better access to forage as early seral stage stands have greater forage biomass than closed-canopy forests and direct solar radiation to provide warmth in the cooler seasons. This study provides insight into the complexity of hierarchical decision-making, such as how risky habitat features and land cover type influence habitat selection differently across seasons and spatial scales, influencing the decision-making of elk. Scale-dependent behavior is crucial to understand within specific geographic regions, as these decisions scale up to influence population dynamics.

Urbanization alters sandy beach scavenging assemblages and dogs suppress ecosystem function

AbstractUrbanization is rapidly transforming coastal landscapes around the world, altering the structure and function of marine, intertidal, and terrestrial ecosystems. In tandem, coastal areas are hotspots for human recreation, leading to shifts in wildlife behavior and activity patterns. Together, urban development and recreational use of wildlife habitats can shape wildlife behavior, abundance, and ecosystem dynamics at different spatial and temporal scales. In this study, we explore the impact of urbanization and human and domestic dog activity on the structure of vertebrate scavenging assemblages and the ecosystem functions they provide in sandy beach ecosystems across 40 km of the central California coast, USA. We surveyed vertebrate scavenging assemblages using baited camera traps on 17 beaches spanning a gradient of coastal urbanization. We found that urbanization extent within small spatial scales (i.e., 1 or 3 km radii of each site) and the rate of beach visitation by domestic dogs or humans were the best additive predictors of assemblage structure. We identified pronounced urbanization‐associated shifts in the composition of vertebrate scavenger guilds but found that the rate of carrion processing was more strongly influenced by domestic dog habitat use and diel period. Scavenging activity was substantially lower on beaches with more domestic dogs, suggesting that dogs interfere with critical scavenging ecosystem functions on sandy beaches. Our results underscore the pervasive and nuanced effects of urbanization and recreation on the dynamics of land–sea connectivity and suggest a need for comprehensive consideration of cross‐ecosystem linkages in ongoing shoreline conservation and development efforts.

First telemetry insights into the movements and vertical habitat use of megamouth shark (Megachasma pelagios) in the northwest Pacific

The megamouth shark (Megachasma pelagios) is one of the ocean's largest and most enigmatic elasmobranchs, with only a few hundred individuals ever recorded. Most of what is known about the species comes from rare fishery bycatch, stranding, or sighting events, precluding an in-depth understanding of its movement ecology. Here, we report the results from three megamouth sharks outfitted with pop-up satellite archival transmitting tags to assess the species' horizontal and vertical movement patterns. Deployments of 12, 58, and 244 d in duration provided the first direct evidence of multi-month fidelity to the waters east of Taiwan and seasonal movement out of the region. Depth and temperature data revealed a pattern of normal diel vertical migration, with the majority of the day spent in the mesopelagic zone and night in the epipelagic. Vertical habitat use suggests potential behavioral thermoregulation and was consistent with tracking of migrating mesopelagic prey across diel periods. We discuss the specialized analytical methods needed to reconstruct the spatial habitat use of deep-diving megamouth shark from tag sensor measurements of the magnetic field, as well as avenues for future research on this understudied megaplanktivore.

Evaluation of pool-and-weir fishway efficiency for the upstream spawning migration of Qinghai Lake's naked carp

Przewalski's Naked Carp (Gymnocypris przewalskii) is a typical migratory fish species of the Qinghai Lake region (China). This study focused on the Gangbei Channel fishway located in the Shaliu River, a tributary of Qinghai Lake. A fish passage study was conducted during the peak of the upstream migration of G. przewalskii, and entry proportion and passage efficiency in the Gangbei channel fishway was monitored in real-time using PIT-Telemetry. A detailed hydraulic characterization of the fishway was done using a 3-D numerical model validated by in-situ measurements, and combined with empirical swimming ability data for the species. The results showed that: (1) the proportion of released G. przewalskii entering and passing the fishway were 13% and 5%, respectively; (2) discharge, fish body length, salinity, and diel period were key factors affecting the attempt rate of the G. przewalskii; (3) The critical swimming speed and sprint swimming speed at 50% of G. przewalskii reaching fatigue were 1.02 m/s and 1.91 m/s, respectively; (4) Based on the swimming ability of G. przewalskii and the hydraulic characteristics of the fishway, the flow velocity at the weir sections of the fishway exceeded the sprint swimming ability of G. przewalskii, creating a velocity barrier. Data derived from this study will be used to provide a more comprehensive theoretical basis and data reference for the eco-hydraulic reconstruction of pool-and-weir fishways providing an efficient upstream passage for the conservation of G. przewalskii and other species.

First insights into the vertical habitat use of young porbeagles in the north-western Atlantic with implications for bycatch reduction strategies

Context For threatened marine species, data on their vertical habitat use patterns can reveal risk of interactions with fishing gear and can inform bycatch avoidance strategies. Such data are lacking for young porbeagles (Lamna nasus), which are captured as bycatch in north-western Atlantic fisheries. Aims We aimed to examine temporal patterns in diving and characterise vertical habitat use of young porbeagles during summer and autumn. Methods We used data from short-term (28-day), high-resolution (5-min interval) pop-off satellite tags attached to 14 young (young-of-the-year and 1-year-old) porbeagles to model depth use. Key results Occupied depths ranged from the sea surface to 679 m, with ambient water temperatures of −0.2 to 26°C. Diel period and season were factors related to depth use. Conclusions Sharks exhibited a diel activity pattern characterised by more extensive use of the water column during the day while remaining primarily at the surface at night. Depth use differed between seasons, with summer characterised by greater affinity for surface waters (0–10 m) compared to autumn. Implications Young porbeagles are at risk of interaction with active fisheries on the continental shelf, but interactions may be reduced by setting gear deeper at night or during summer.

Using multiple scales of movement to highlight risk–reward strategies of coyotes (Canis latrans) in mixed‐use landscapes

AbstractMany wildlife species vary habitat selection across space, time, and behavior to maximize rewards and minimize risk. Multi‐scale research approaches that identify variation in wildlife habitat selection can highlight not only habitat preferences and risk tolerance but also movement strategies that afford coexistence or cause conflict with humans. Here, we examined how anthropogenic and natural features influenced coyote (Canis latrans) habitat selection in a mixed‐use, agricultural landscape in Mendocino County, California, USA. We used resource selection functions and hidden Markov models to test whether coyote selection for anthropogenic and natural features varied by time of day or by behavioral state (resting, foraging, and traveling). We found that coyotes avoided development, but, contrary to our expectations, coyotes selected for roads, agriculture, and areas with risk of human encounter and rifle use regardless of diel period or behavioral state. While traveling, coyotes increased selection for roads and avoided ruggedness, indicating that unpaved roads may enhance connectivity for coyotes in mixed‐use landscapes. Finally, we found that coyotes selected for mountain lion habitat when resting and at night, signifying that risk from natural predators was not a factor in habitat selection at coarse scales. Coyote habitat selection for places and times associated with human activity, without variation across scales, signals a potential for conflict if coyotes are perceived by people as a nuisance.

A global dataset of diel activity patterns in insect communities

Insect activity powers ecosystems and food production globally. Although insect activity is known to vary with the rise and setting of the sun, there is surprisingly limited empirical information on how insect abundance and richness varies across the 24-hour day–night (diel) cycle. Moreover, commonly used methods for sampling insects such as light traps do not provide suitable comparisons of community properties between diel periods. We present a dataset of 1512 observations of abundance and richness during diurnal and nocturnal periods in insect communities worldwide. The data were collected from 99 studies that systematically sampled insect communities during day and night, using sampling methods minimally influenced by diel variation, such as movement-based interception traps. Spanning six continents, 41 countries and 16 insect orders, the data can support investigations into the factors influencing insect diel preferences as well as the causes and consequences of temporal changes in insect biodiversity. The data also provides key baseline information on the diel activity patterns of insect communities for long-term ecological monitoring. These pursuits take on added significance considering contemporary ‘insect declines’ and increasing anthropogenic impacts on diurnal and nocturnal biodiversity.

Seasonal and diurnal marine mammal presence in the proposed marine protected area of Southampton Island, Hudson Bay, Nunavut as revealed by passive acoustic monitoring

Marine protected areas contribute to mitigating the effects of human activities on marine ecosystems. The waters of Southampton Island, Nunavut, Canada are under consideration to become a marine protected area, but baseline information of marine mammal presence and habitat use is lacking. This study represents the first passive acoustic monitoring of marine mammals in this area, with data collected in 2018 and 2019. Bioacoustics analyses and generalized linear models were used to investigate species seasonal and temporal vocalization trends; infer behavior and habitat use from vocal cues; and explore vocal activity correlation with sea ice. Over a diel period, bearded seals ( Erignathus barbatus (Erxleben, 1777)) and walruses ( Odobenus rosmarus (Linnaeus, 1758)) were found to increase their vocal activity at night, whereas belugas ( Delphinapterus leucas (Pallas, 1776)) mainly vocalized during daytime. Seasonally, bearded seals were recorded only during their breeding season at sea ice break-up, while walruses vocalized consistently throughout the open-water period outside their breeding season. Beluga vocal trends suggest their use of the area as a migratory corridor during sea ice break-up and freeze-up. Finally, bowhead whales ( Balaena mysticetus Linnaeus, 1758) were recorded later than expected, concurrently with the onset of their mating vocal displays during the fall migration at sea ice freeze-up.

Challenges in downstream dam passage and the effect of dam removal on Atlantic salmon (Salmo salar) smolt migrations.

Migration is critical for life-cycle completion in diadromous fish species. River connectivity is vital in facilitating these large-scale movement events, but the extent of present-day river fragmentation can interfere with these migrations. Fish passage solutions (FPSs) are commonly implemented with the aim of improving river connectivity. In our study, we investigated the performance of two types of FPSs, spill regimes and complete dam removal, on Atlantic salmon (Salmo salar) smolt migrations. We used acoustic telemetry to monitor migration behavior and passage success of 120 wild smolts released in three different groups/sites: one group with two dams to pass to reach the river mouth, a second group with one dam to pass, and a control group without any barriers to pass (upstream of a recently removed hydroelectric dam). Smolt passage probabilities were similar for the two studied dams (87% and 86%) but showed variation in path choice, delay times, and loss rates. Passage success was influenced by several factors, such as body size, diel period, and water temperature, but not flow. Cumulative passage success to the river mouth was 61%, with most individuals being lost within lentic river stretches, either in the forebays of hydroelectric power stations or in naturally wide river stretches. Within the recently rehabilitated river sections (post dam removal), passage speeds were significantly faster than all other sections of the river (post-rehabilitation x¯ = 56.1 km/day) with significantly faster speeds compared to pre-rehabilitation (pre-x¯ = 28.0 km/day). Our findings provide valuable information on the benefits of dam removal and highlight the need for further rehabilitation measures in upriver reaches where barriers still affect downstream passage.

Human access constrains optimal foraging and habitat availability in an avian generalist.

Animals balance costs of antipredator behaviors with resource acquisition to minimize hunting and other mortality risks and maximize their physiological condition. This inherent trade-off between forage abundance, its quality, and mortality risk is intensified in human-dominated landscapes because fragmentation, habitat loss, and degradation of natural vegetation communities is often coupled with artificially enhanced vegetation (i.e., food plots), creating high-risk, high-reward resource selection decisions. Our goal was to evaluate autumn-winter resource selection trade-offs for an intensively hunted avian generalist. We hypothesized human access was a reliable cue for hunting predation risk. Therefore, we predicted resource selection patterns would be spatiotemporally dependent upon levels of access and associated perceived risk. Specifically, we evaluated resource selection of local-scale flights between diel periods for 426 mallards (Anas platyrhynchos) relative to wetland type, forage quality, and differing levels of human access across hunting and nonhunting seasons. Mallards selected areas that prohibited human access and generally avoided areas that allowed access diurnally, especially during the hunting season. Mallards compensated by selecting for high-energy and greater quality foraging patches on allowable human access areas nocturnally when they were devoid of hunters. Postseason selection across human access gradients did not return to prehunting levels immediately, perhaps suggesting a delayed response to reacclimate to nonhunted activities and thus agreeing with the assessment mismatch hypothesis. Last, wetland availability and human access constrained selection for optimal natural forage quality (i.e., seed biomass and forage productivity) diurnally during preseason and hunting season, respectively; however, mallards were freed from these constraints nocturnally during hunting season and postseason periods. Our results suggest risk-avoidance of human accessible (i.e., hunted) areas is a primary driver of resource selection behaviors by mallards and could be a local to landscape-level process influencing distributions, instead of forage abundance and quality, which has long-been assumed by waterfowl conservation planners in North America. Broadly, even an avian generalist, well adapted to anthropogenic landscapes, avoids areas where hunting and human access are allowed. Future conservation planning and implementation must consider management for recreational access (i.e., people) equally important as foraging habitat management for wintering waterfowl.

Trapping strategy and diel periodicity affect capture rate of Halyomorpha halys (Hemiptera: Pentatomidae) in agroecosystems.

The polyphagous pest, Halyomorpha halys (Stål) (Hemiptera: Pentatomidae), damages fruit in orchards and field crops and is often found within nearby woodlands. Pheromone-baited traps can be used to monitor H. halys. However, the efficiency of trapping H. halys may vary depending on trapping strategy (live vs. dead capture), location (ground or canopy), and diel periodicity of captures. We compared H. halys capture within fruiting hosts for: (i) live and kill traps on the ground vs. traps in the canopy of black cherry (Prunus serotina Ehrh.) (Rosales: Rosaceae), sugarberry (Celtis laevigata Willdenow) (Rosales: Cannabaceae), and pecan (Carya illinoinensis (Wangenh.) K. Koch) (Fagales: Juglandaceae) trees, (ii) ground and canopy-live traps in sassafras (Sassafras albidum (Nutt.) Nees) (Laurales: Lauraceae), and (iii) whether diel periodicity was detected for live capture in sassafras and cotton. More H. halys adults and nymphs were captured in kill traps than in live traps. More nymphs were captured in kill traps in black cherry and sugarberry on the ground than in the canopy. Live adult capture was significantly greater in sassafras and pecan canopies than on the ground. In cotton and sassafras, more live adults were captured from 8 PM-noon, with the fewest captured from noon-6 PM. A better understanding of stink bug activity in the field allows for improved trapping and, possibly, improved timing of treatment applications.

Cougars, wolves, and humans drive a dynamic landscape of fear for elk.

To manage predation risk, prey navigate a dynamic landscape of fear, or spatiotemporal variation in risk perception, reflecting predator distributions, traits, and activity cycles. Prey may seek to reduce risk across this landscape using habitat at times and in places when predators are less active. In multipredator landscapes, avoiding one predator could increase vulnerability to another, making the landscape of fear difficult to predict and navigate. Additionally, humans may shape interactions between predators and prey, and induce new sources of risk. Humans can function as a shield, providing a refuge for prey from human-averse carnivores, and as a predator, causing mortality through hunting and vehicle collisions and eliciting a fear response that can exceed that of carnivores. We used telemetry data collected between 2017 and 2021 from 63 Global Positioning System-collared elk (Cervus canadensis), 42 cougars (Puma concolor), and 16 wolves (Canis lupus) to examine how elk habitat selection changed in relation to carnivores and humans in northeastern Washington, USA. Using step selection functions, we evaluated elk habitat use in relation to cougars, wolves, and humans, diel period (daytime vs. nighttime), season (summer calving season vs. fall hunting season), and habitat structure (open vs. closed habitat). The diel cycle was critical to understanding elk movement, allowing elk to reduce encounters with predators where and when they would be the largest threat. Elk strongly avoided cougars at night but had a near-neutral response to cougars during the day, whereas elk avoided wolves at all times of day. Elk generally used more open habitats where cougars and wolves were most active, rather than altering the use of habitat structure depending on the predator species. Elk avoided humans during the day and ~80% of adult female mortality was human caused, suggesting that humans functioned as a "super predator" in this system. Simultaneously, elk leveraged the human shield against wolves but not cougars at night, and no elk were confirmed to have been killed by wolves. Our results add to the mounting evidence that humans profoundly affect predator-prey interactions, highlighting the importance of studying these dynamics in anthropogenic areas.

Transcriptome analysis of the harmful alga Heterosigma akashiwo under a 24-hour light-dark cycle

The photoperiod, which is defined as the period of time within a 24-hour time frame that light is available, is an important environmental regulator of several physiological processes in phytoplankton, including harmful bloom-forming phytoplankton. The ichthyotoxic raphidophyte Heterosigma akashiwo is a globally distributed bloom-forming phytoplankton. Despite extensive studies on the ecological impact of H. akashiwo, the influence of the photoperiod on crucial biological processes of this species remains unclear. In this study, gene expression in H. akashiwo was analyzed over a 24-hour light-dark (14:10) treatment period. Approximately 36 % of unigenes in H. akashiwo were differentially expressed during this 24-hour treatment period, which is indicative of their involvement in the response to light-dark variation. Notably, the number of differentially expressed genes exhibited an initial increase followed by a subsequent decrease as the sampling time progressed (T0 vs. other time points). Unigenes associated with photosynthesis and photoprotection reached their peak expression levels after 2–4 h of illumination (T12-T14). In contrast, the expression of unigenes associated with DNA replication peaked at the starting point of the dark period (T0). Furthermore, although several unigenes annotated to photoreceptors displayed potential diel periodicity, genes from various photoreceptor families (such as phytochrome and cryptochrome) showed unique expression patterns. Collectively, our findings offer novel perspectives on the response of H. akashiwo to the light-dark cycle, serving as a valuable resource for investigating the physiology and ecology of this species.

Similarity visualization of soundscapes in ecology and music

The concept of a soundscape is found in both ecology and music studies. Nature soundscapes and soundscape compositions are analyzed by both disciplines, respectively, to understand their biological diversity and ecosystem functioning and to interpret their compositional structure. A major challenge for both disciplines is visualizing the information embedded in a large variety of soundscapes and to share it with different audiences, from non-professionals to experts. To analyze soundscapes, both disciplines have independently developed similarity visualizations. However, no attempt has been made yet to combine these two fields of research to improve our ecological and musical perception of environmental sounds through shared similarity analysis methods. In this paper, we introduce a new visualization tool, the soundscape chord diagram (SCD), a circular similarity representation method that can be applied to any type of soundscape, either in ecoacoustics or electroacoustic studies. Our approach consists of visualizing spectral similarities between predefined sound segments based on the computation of a β-diversity acoustic index and on automatic clustering. SCDs were tested on two ecoacoustic forest databases and two electroacoustic soundscape compositions. SCDs were performant for the identification of specific acoustic events and highlighted known diel periods for nature soundscapes and written parts for soundscape compositions. This new visualization tool allows us to easily decipher the structure of musical and ecological acoustic data. SCDs could be applied to a large variety of soundscapes and promote their knowledge and preservation. This study opens a new way of investigating soundscapes at the interface between ecology and music, bringing together science and the arts.

Horizontal migration of zooplankton in lake–wetland interfaces. Can temperature-driven surface exchange flows modulate its patterns?

Lake ecology can be affected by exchange flows driven by horizontal temperature gradients in lake–wetland interfaces. In this work, we investigate the hypothesis that thermally driven flows modulate the horizontal migration patterns of freshwater zooplankters. A 48-h field campaign in a shallow lake (Lake Vela, Quiaios, Portugal) was carried out to test this hypothesis. Thermal differences between the littoral and limnetic areas were measured along two transects featuring a Schoenoplectus lacustris and a Myriophyllum aquaticum stand in the littoral. In parallel, the physiochemistry and chlorophyll a, as a proxy for food availability differences between the littoral and the limnetic zones, were monitored. Zooplankton samples were collected for assessing overall and group-specific number-density differences. The diel period (day or night) and the site (littoral or limnetic zone) did not interact significantly to modulate the variation patterns for the studied physiochemical variables, indicating that these parameters should not explain horizontal zooplankton distribution patterns. The expected patterns for zooplankton diel horizontal migration as driven by the presence of visual predators were occasionally confirmed by our limnetic versus littoral abundance records through time, depending on the transect. Group-specific abundance patterns indicate particular features: copepods always preferred the littoral over the limnetic zone regardless of the diel period; chydorids always preferred the littoral zone regardless of the macrophyte stand involved; bosminids tended to preferentially concentrate in the limnetic zone. No consistent relationship was identified between the expected flow direction due to temperature differences and zooplankton abundance changes, although it occasionally occurred through the dataset.

Assessing electrofishing effort required to estimate species richness of fishes in nonwadeable rivers of Alabama, USA

AbstractObjectiveMuch of the fish biodiversity in the southeastern USA is found in lotic systems, but assessment of fish community structure in large nonwadeable rivers has lagged compared to streams. Sampling designs that adequately estimate species richness are a prerequisite to creating bioassessment metrics but thus far has not been attempted in highly biodiverse rivers in the southeastern USA east of the Mississippi River.MethodsFish communities in four nonwadeable rivers across Alabama spanning catchments of 2046–57,415 km2 were sampled using electrofishing in summer and fall of 2015 and 2016. All rivers were sampled during day; two rivers were also sampled at night to assess diel changes in species accumulation.ResultIn total, 55,239 fishes were collected across rivers, representing 106 species in 24 families. Species collected continued to increase as sampling increased in all river‐season combinations, rarely displaying an asymptote. Species generally accrued more quickly and accumulation curves showed more tendency to asymptote in fall than summer in all but the largest river. Species accumulated faster at night than during the day in both rivers during summer but was similar between diel periods in fall. On average, 95% of the species observed were collected in eight subreaches in fall but not until nine during summer; however, observed number of species was generally one to six species lower than mean estimates of true species richness. Sampling efforts collected approximately similar species assemblages across transects, years, season, and diel periods. Extrapolation of species accumulation curves suggested that 6–17 km of sampling distance would be required to collect all species present.ConclusionResults of this study demonstrate that assessing fish communities in species nonwadeable rivers requires an inordinate amount of sampling effort, which may be unattainable for many agencies. Further study is warranted to develop innovative solutions to overcome these logistical challenges.