Sediment Diatom Assemblages Research Articles

Effects of climate warming and declining water quality on the eco-environmental evolution of Jinmucuo Lake: Evidence from sedimentary diatom assemblages

Effects of climate warming and declining water quality on the eco-environmental evolution of Jinmucuo Lake: Evidence from sedimentary diatom assemblages

Before and after mink fur farming: water chemistry and sedimentary diatom assemblages in lakes from southwestern Nova Scotia, Canada

Libera N, Rühland KM, Kurek J, Smol JP. 2024. Before and after mink fur farming: water chemistry and sedimentary diatom assemblages in lakes from southwestern Nova Scotia, Canada. Lake Reserv Manage. 40:18–35. Since the 1930s, farmed mink pelts have been an important contributor to the economy of rural Nova Scotia (NS, Canada). However, these farms are a potential source of pollutants to nearby ecosystems. To determine how regional lakes have been affected by fur farms, we compared modern water chemistry and sedimentary diatom assemblages in 14 lakes in southwestern Nova Scotia. We categorized lakes into 3 groups: (a) 5 lakes with fur farms in the catchment or near inlets; (b) 4 lakes downstream from or near fur farms; and (c) 5 reference lakes without hydrological connection to fur farms. To assess whether lake conditions have changed since the establishment of fur farms, we conducted a “before-and-after” paleolimnological analysis comparing surface sediments (representing modern environments) to dated sediments deposited prior to fur farm operations. Diatom assemblages registered distinct responses to eutrophication in several hypereutrophic lakes with farms within their catchment boundaries. In lakes ∼25 km downstream from fur farms, diatom assemblage changes were more characteristic of climate warming and acidification than of eutrophication, despite surface water nutrient concentrations well above levels in reference lakes. We found no association between the presence of fur farms and surface water trace metals that could potentially bioaccumulate and/or biomagnify. Our data indicate that decades of nutrient inputs from fur farms have caused eutrophication at several lakes where fur farms are close to the shoreline or to inlet streams.

Sediment records from Lake Nipissing (ON, Canada) register a lake-wide multi-trophic response to climate change and reveal its possible role for increased cyanobacterial blooms

Recurring cyanobacterial blooms have been reported in Lake Nipissing (Ontario, Canada) since at least 2000. However, monitoring data indicate that surface water nutrient concentrations have not increased over the past ∼45 years in this large, shallow, mesotrophic lake. Applying paleolimnological methods, we establish baseline environmental conditions and extend the Lake Nipissing water quality data to pre-industrial times. Lake-wide assessment of changes in nutrient status, algal production, and effects of climate warming are provided by examining: 1) modern and pre-industrial sedimentary diatom assemblages from nine locations; 2) temporal trends in sedimentary photosynthetic pigments over ∼200 years from five locations; and 3) detailed sedimentary profiles of diatom and chironomid assemblage composition from Callander Bay, spanning the past ∼200 years. A pronounced shift in diatom assemblage composition was registered at all sites with pre-industrial sediments dominated by Aulacoseira spp. and modern samples dominated by Discostella stelligera. The detailed diatom analysis for Callander Bay indicated that this shift occurred ca. 1990. Since ca. 1975, cyanobacterial production (spectrally inferred from sediments) exceeded the ∼200-year mean and matches the observed increase in bloom reports. Twentieth century shifts in chironomid assemblages in Callander Bay from Procladius to Chironomus spp. dominance indicate lower hypolimnetic oxygen in recent decades. Collectively, these changes suggest that previously polymictic Lake Nipissing is now experiencing periods of thermal stratification and development of transient anoxia in bottom waters. These conditions are more prevalent and widespread in modern Lake Nipissing, consistent with a response to recent warming, decreased wind speed, and a longer ice-free period.

Spatial distribution of surface-sediment diatom assemblages from 45 Tibetan Plateau lakes and the development of a salinity transfer function

The Tibetan Plateau (TP) is often referred to as the “Asian Water Tower”, as it plays a crucial role in supplying water for ∼1.9 billion people. Lakes in this arid mountain region have a wide salinity gradient and are sensitive to the complex interactions between climate and the water cycle, affecting aquatic ecosystems and species distributions. Here, we analyzed relationships between measured environmental variables and the spatial distribution of surface sediment diatom assemblages from 45 lakes located throughout the TP with the intention of developing a diatom-inference model for salinity. Diatom assemblage composition and diversity differed among lakes from the western (W), southern (S), northern (N), and southeastern (E) regions of the TP. The most common taxa observed in the lake set, Pantocsekiella ocellata, Nitzschia palea, and Staurosira venter, tended to have widespread distributions across the TP. In general, diatom diversity and richness tended to be highest in lakes with salinity concentrations between 0.1 and 10 g/L and were lowest in high salinity lakes (>20 g/L) of the N region. Canonical correspondence analysis (CCA) identified lake water salinity and maximum lake depth as explaining a statistically significant portion of diatom assemblage variation. Weighted-averaging (WA) was used to develop a diatom-based salinity inference model (R2jack = 0.71, RMSEPjack = 0.28) based on diatom optima from freshwater to meso-hyposaline lakes of the TP. Diatom-salinity reconstructions and changes in diatom community composition can potentially be used to track long-term patterns in climate and environmental conditions across the highly complex mountain landscape of the TP.

Late Holocene Vistula River floods recorded in grain size distributions and diatom assemblages of marine sediments of the Gulf of Gdańsk (Baltic Sea)

Late Holocene Vistula River floods recorded in grain size distributions and diatom assemblages of marine sediments of the Gulf of Gdańsk (Baltic Sea)

Diatom assemblages in the Lateglacial-Holocene sediments of Lake Bolshoye Shchuchye (Polar Urals)

The study of the diatom assemblages from the sediment core from Lake Bolshoye Shchuchye (Polar Urals) was performed. The composition of diatom assemblages in the Lateglacial sediments characterizes alternating periods of predominance of planktonic and benthic diatoms. In the Holocene, planktonic species predominate with Aulacoseira subarctica being the most abundant. The climate amelioration during the first half of the Holocene resulted in increased proportions of large-celled diatoms, the taxa with a wide geographical distribution, as well as species preferring higher trophicity. The cooling of the Late Holocene, in turn, caused an increase in the proportion of cold-water species characteristic of oligotrophic lakes. The morphological variability of A. subarctica observed in the Holocene sediments apparently results from its adaptation to changes in hydrodynamic conditions.

Diatom assemblages of the Holocene sediments from the northeastern Norwegian-Greenland Basin

This paper presents the results of diatom analysis of Holocene sediments from the northeastern part of Norwegian-Greenland Basin in comparison with palynomorph and foraminifera data. Main Holocene paleogeographic events of Norwegian-Greenland Basin were established by micropaleontological data.

Assessment of the current state of the Lake Imandra ecosystem (Russia, Murmansk region) using statistical and bioindication methods

The diatom assemblages of surface sediments of the Lake Imandra were studied. Lake Imandra is the largest freshwater reservoir in the Murmansk region. Significant differences in the composition of diatom assemblages were revealed in various parts of the water area, differing in the type and intensity of anthropogenic load. With the help of bioindication and statistical methods, the main factors influencing the development of certain diatom assemblages were identified.

Ecological and habitat preferences of diatoms in lakes of Lützow‐Holm Bay, East Antarctica

Lakes and ponds along the Antarctic coastline provide an opportunity for palaeoclimate reconstructions to complement ice core records from the interior of the continent, including via their diatom records. Diatom palaeoecological studies in remote Antarctica are partially undermined by uncertainty concerning the relative influence of climate, water quality and substrate on diatom species assemblages. The relative abundance and distribution of diatoms across a range of substrates and water depths were analysed from nine lakes in the coastal ice-free regions of Lützow-Holm Bay, East Antarctica. Specific conductivity and sample position (whether from the shallow, littoral zone, or from deeper parts of the lake) were identified as significant variables in explaining diatom distribution, using non-metric multidimensional scaling and regression tree analysis to identify statistically significant groupings of diatom assemblages and associated environmental variables. In contrast to the significant difference between the diatom assemblages from the shallow littoral region and the lake floor at most sites, the diatom flora from different substrates in the littoral zone were not significantly different, which may be related to the extent of ice cover. Humodophila australis was the most common species in the lakes with lowest specific conductivity, whereas Halamphora vyvermaniana was associated with lake-floor habitats and Psammothidium papilio with samples from littoral zones at several sites. These observations hold significance for the interpretation of lake sediment diatom assemblages in Lützow-Holm Bay as archives of past climate and indicate that sampling strategies should consider a range of locations in lakes, with samples from the lake floor prioritised for the interpretation of sediment core diatom records.

Climate change and nutrient enrichment altering sedimentary diatom assemblages since pre-industrial time: evidence from Canada’s most populated ecozone

Lakes worldwide are under threat by a myriad of environmental stressors that have been increasing in number and magnitude. These stressors can be regional such as climate change, or local such as nutrient-rich runoff, invasive species, and road salt contamination, to name but a few. To protect lake ecosystems from further deterioration, we need long-term data to define pre-disturbance baselines and to identify stressors that are causing the greatest ecological changes. Paleolimnology is an effective approach to reconstruct limnological history, providing an important window into past changes. Here, we applied paleolimnological tools to explore the pre-industrial and contemporary diatom assemblage changes of 27 lakes located in the most populated ecozone in Canada, the Mixedwood Plains. We also examined a full sediment core for Lac des Chicots (Southern Québec), aiming to disentangle the impacts of natural versus anthropogenic interactions and to assess their relative effects on the lake’s biotic structure. Our ordination analysis suggests that the Mixedwood Plains lakes have experienced varying lake-specific ecological changes over the past ~150 years, with two major trends across most study lakes: (1) a prevalent increase in planktic species, and (2) a rise in mesotrophic/eutrophic taxa in lakes receiving high human impacts. Our case study of Lac des Chicots identifies ecological impacts from both historical natural events and recent human activities, such as cultural eutrophication and climate warming. Overall, our study demonstrates that lakes in the Mixedwood Plains ecozone have experienced marked ecological changes that are mainly associated with human impacts.

The sub-fossil diatom distribution in the Beibu Gulf (northwest South China Sea) and related environmental interpretation.

Located in northwestern South China Sea (SCS), the Beibu Gulf constitutes an environmentally sensitive region shaped by land-ocean-atmosphere interactions in Asia between the western Pacific and eastern Indian Oceans. This study aims to provide a comprehensive view of the sub-fossil diatom biogeography, distribution pattern and oceanographic environmental controls with support of multivariate methods based on Beibu Gulf core-top samples. Cluster analysis of diatom assemblages divides the distribution pattern into four subclusters. Sea surface salinity (SSS), temperature (SST), trophic state (chlorophyll a concentration in this study) and water depth constrain the diatom distribution pattern through canonical redundancy analysis although only partly support an interpretation of the relationship between these various variables. Chlorophyll a has a strong correlation to diatom distribution, and responds to Paralia sulcata occurrence, while SSS and SST also have significant influence and indicate warm water invasion from the open SCS. Water depth is a subordinate factor in terms of Beibu Gulf diatom distribution. The ca. 25 m water-depth marks the upper extent of Paralia sulcata dominance in the northern Beibu Gulf. A strong mixing area with a complex diatom distribution exists below this water depth in the middle of Beibu Gulf. Coastal currents from north of SCS invade Beibu Gulf through Qiongzhou Strait and south of Hainan Island, as recorded by higher percentages of Paralia sulcata and Cyclotella striata at these sites. Our results provide a selection of evaluation method for a marine ecological red-line definition for sustainable development. This study highlights the perspective relationships between the spatial distribution of sub-fossil diatom assemblages in surface sediments and oceanographic variables, which could serve as a model for paleoenvironmental and paleoclimatic reconstruction in future marginal sea geoscience research for the Beibu Gulf, northwestern SCS.

Comparative analysis of Thalassionema chloroplast genomes revealed hidden biodiversity

The cosmopolitan Thalassionema species are often dominant components of the plankton diatom flora and sediment diatom assemblages in all but the Polar regions, making important ecological contribution to primary productivity. Historical studies concentrated on their indicative function for the marine environment based primarily on morphological features and essentially ignored their genomic information, hindering in-depth investigation on Thalassionema biodiversity. In this project, we constructed the complete chloroplast genomes (cpDNAs) of seven Thalassionema strains representing three different species, which were also the first cpDNAs constructed for any species in the order Thalassionematales that includes 35 reported species and varieties. The sizes of these Thalassionema cpDNAs, which showed typical quadripartite structures, varied from 124,127 bp to 140,121 bp. Comparative analysis revealed that Thalassionema cpDNAs possess conserved gene content inter-species and intra-species, along with several gene losses and transfers. Besides, their cpDNAs also have expanded inverted repeat regions (IRs) and preserve large intergenic spacers compared to other diatom cpDNAs. In addition, substantial genome rearrangements were discovered not only among different Thalassionema species but also among strains of a same species T. frauenfeldii, suggesting much higher diversity than previous reports. In addition to confirming the phylogenetic position of Thalassionema species, this study also estimated their emergence time at approximately 38 Mya. The availability of the Thalassionema species cpDNAs not only helps understand the Thalassionema species, but also facilitates phylogenetic analysis of diatoms.

Paleoecological reconstruction of ecosystem of Lake Imandra (Russia, Murmansk region) based on diatom analysis of sediments

Abstract. This paper provides information about diatom assemblages in sediments of large arctic reservoir (Lake Imandra). The distribution of the taxonomic composition and structure of diatoms for several centuries has been studied. The periods and causes of changes in the state of the lake ecosystem are determined, and a conclusion about future trends is made. The data obtained can be used for monitoring the ecological state of the environment and water bodies.

Spatial and temporal dynamics of diatom assemblages of Lake Imandra (Russia, Murmansk region)

Diatom assemblages of sediments of large arctic reservoir (Lake Imandra), spatial and temporal distribution of the taxonomic composition of diatoms and structure were studied. We identified differences in the current state of the ecosystem in certain areas due to both natural and anthropogenic causes. The periods and causes of changes in the state of the lake ecosystem are determined, and a conclusion about future trends is made.

Surface sediment diatom assemblages from four alpine lakes in the Zelengora Mountains (Bosnia and Herzegovina): A pilot study

This pilot study presents surface sediment diatom assemblages in four alpine lakes in the Zelengora Mountains. The four lakes are distributed across an alpine treeline, spanning temperate mixed forest and treeless alpine tundra zones, thus offering an excellent opportunity to study the interaction of physicochemical properties and biotic communities in different alpine lake settings. A total of 52 taxa from 28 genera were identified, with only one taxon (Staurosirella neopinnata) present in every lake. In the Orlovacko, Donje Bare and Crno lakes, the diatom assemblages were mainly comprised of benthic and tychoplanktonic species, as opposed to the Kotlanicko Lake where the planktonic Lindavia radiosa was the most abundant species. Our results identified water turbidity, macrophytes and pH to be the prevailing environmental factors which influence the diatom assemblage composition in the studied lakes. The results of this study also represent a starting point in establishing biomonitoring programmes for the sustainable management of these alpine aquatic ecosystems in a rapidly changing environment.

Diatom sedimentary assemblages and Holocene pH reconstruction from the Canadian Arctic Archipelago’s largest lake

ABSTRACT The Arctic has warmed significantly over the past decades. However, the evolution of Arctic climate during the Holocene remains to be clarified in more detail, and regional factors controlling aquatic ecosystem evolution need to be better defined to grasp the sensitivity of lakes to rapid environmental change. Nettilling Lake was studied for changes in sedimentary diatom assemblages over the last 5 000 years. Lake water pH was reconstructed by applying a diatom-based lake water pH inference model. We hypothesized that the changes in diatom assemblages were driven by variations in lake water transparency and attendant water turbidity associated with the input of fine suspended solids from glacial meltwaters. Reduced underwater light resulted in greater abundance of planktonic over benthic taxa from ca. 5 000 to 3 000 yrs. cal. BP, followed by less turbid conditions and proliferation of benthic taxa during regional cooling. The lake water was slightly alkaline throughout the Holocene, ranging between pH 7.1 and 7.7. Our results support the notion that hydrological processes, dependent on climate variations, have a first-order influence on the regulation of the lake water pH through glacial meltwater inputs, which will likely continue to control the lake’s long-term chemical and biological evolution.

Ecological distribution of Stephanodiscus niagarae Ehrenberg in central Mexico and niche modeling for its last glacial maximum habitat suitability in the Nearctic realm

Stephanodiscus niagarae Ehrenberg is currently restricted to specific regions of central Mexico, however, during the late Pleistocene, it had a wider distribution in the country. This change in distribution is similar to those observed for several organisms that migrated southwards during cold, glacial climates, supporting the hypothesis that central Mexico acted as glacial refugia for these species. This study aims to support this hypothesis for S. niagarae as well as to analyze its ecological distribution in modern environments in central Mexico. For this purpose we studied 18 samples from 16 lakes located around Mexico City, selected among 46 lakes along the Trans-Mexican Volcanic Belt. Diatom assemblages in superficial sediments, and climatic, hydrochemistry, and nutrient parameters of each lake were analyzed by means of canonical correspondence analyses. Additionally, we created an ecological niche model (ENM) with modern occurrence data (n = 47) and environmental variables (WorldClim) to produce potential distribution maps of S. niagarae during the present time and under the LGM conditions in the Nearctic realm. S. niagarae was recorded only in 4 sites in central Mexico (abundances < 10%) associated with temperate, subhumid conditions in freshwater lakes with [Mg2+] − [Ca2+] − [HCO3−] ionic dominance and high turbidity, mesotrophic to hypertrophic systems (based on chlorophyll a values), but with a tendency to P-limitation. In our study sites S. niagarae showed low abundances in diatom assemblages dominated by Aulacoseira spp. Temperature (annual mean, coldest and warmest quarters means) was identified by ENM as the main environmental variable controlling its distribution, with its highest modern support in the USA, southern Canada, and a restricted distribution in the highlands of western and central Mexico. Whereas, the LGM scenario (− 5.5 °C) identified the western and central highlands in Mexico and southern USA as the highest probability distribution areas supporting the approach that the Sierra Madre Occidental could have acted as a migration corridor offering suitable habitats for a southward migration into central Mexico during colder (glacial) periods. In conclusion, S. niagarae distribution in the central and western mountains of Mexico is controlled by temperature changes and its presence may be associated with colder (glacial) periods.

Diatom assemblages from sediment traps in response to large seaweed Gracilaria cultivation off Nan'ao island, South China

Most previous studies on seaweed bioremediation largely focus on laboratory control tests or short-time, in-situ field experiments. Here we present a dataset from 4-year-long field monitoring (2014–2018) in a mariculture area of the Baisha Bay off Nan'ao Island, South China, attempting to examine how the large seaweed Gracilaria lemaneiformis cultivation affects a mariculture ecosystem. The temporal variation in seawater physicochemical properties (TN, TP, Reactive silicate, CODMn, and chlorophyll α) and sediment proxies (TN and TP) suggest that the Baisha Bay maintained a better water quality during the Gracilaria cultivation periods (December–May) than other months. Additionally, sedimentary diatom assemblages during the Gracilaria cultivation periods showed an increase in Shannon-Wiener values, but a decrease in the dominant Thalassionema nitzschioides abundance, total diatom abundances and P/(A + B) ratios [Planktonic/(Attached + Benthic)]. These changes consistently suggest that Gracilaria cultivation may have helped improve seawater quality and phytoplankton diversity, thereby maintain a healthy mariculture ecosystem.

Surface Sediment Diatom Assemblages Response to Water Environment in Dongping Lake, North China

The relationship between the diatom taxa preserved in surface lake sediments and environmental variables in Dongping Lake was explored using multivariate statistical methods. The statistical analysis showed that the lake was eutrophicated in all seasons. Transparency, chlorophyll a (Chla) and total phosphorus (TP) were the dominant environmental factors in spring and summer, and NH4+-N and chemical oxygen demand (COD) were the dominant environmental factors in autumn and winter. Sixteen genera and 43 species of diatom were found in the surface sediments, and the dominant diatom genera were Aulacoseira, Ulnaria, Cyclotella, Navicula and Fragilaria. A redundancy analysis (RDA) and Monte Carlo permutation 20 test revealed that COD, pH, TP, conductivity and transparency were significant factors influencing diatom assemblage change, meaning that the distribution of the diatom assemblages were mostly influenced by nutrient composition, light intensity and ion concentrations.

Diatom Assemblages From Surface Sediments of Two Coastal Lagoons, the Central Part of the Red Sea, Saudi Arabia and Their Associated Environmental Variables

The composition and distribution pattern of diatom assemblages in the surface sediments of Sharm Al-Kharrar and Al-Shuaiba lagoons, situated on the central part of the Red Sea coastline of Saudi Arabia, were analyzed. A total of 191 diatom species from 53 genera were identified. A highly diverse diatom flora dominated by the genera Mastogolia, Amphora sensu lato, Lyrella, and Navicula sensu lato species was observed. Diatom species composition showed the dominance of the benthic forms over the epiphytic and planktonic ones, which can be attributed to the shallowness of the environments. The relationship between the recognized diatom taxa and measured environmental variables was explored using multivariate statistical techniques. Hierarchical ascending clustering and detrended correspondence analyses differentiated six representative diatom assemblages in each Lagoon. Canonical correspondence analysis revealed that grain size, organic matter content, and water depth appeared to be significant environmental factors affecting the distribution and structure of the documented diatom assemblages, while pH, salinity, and temperature were less influential. The majority of species recorded were polyhalobous benthic diatoms, accompanied by a limited abundance of mesohalobous and substantial amounts of oligohalobous forms, which are probably of allochthonous origin and resulting from freshwater input of near seasonal wadi streams and human activities. A comparison between the recognized diatom assemblages and the previously recorded taxa in surrounding areas was made.