Detoxification Mechanisms Research Articles

A Review on Bioremediation Using Nanobiotechnology and Microbial Heavy Metal Resistance Mechanisms

Abstract: Various human actions have raised the level of heavy metal (HM) pollution in the environment. From contaminated water and soil, the HMs infiltrate into the agricultural crops that are consumed by animals as well humans. Deposition of heavy metals leads to DNA damage and several digestive, reproductive, and respiratory system-related health problems. Various microorganisms have evolved mechanisms of HM resistance, tolerance, detoxification, and metabolization. Physicochemical methods of HM treatment are expensive and non-ecofriendly. Therefore, remediation of contaminated soil and water using microorganisms or bioremediation has become a topic of interest for scientists. Bioremediation is a cheaper, eco-friendly and more efficient method. The present review attempts to describe various mechanisms (biosorption, bioaccumulation, biotransformation and active export) by which microbes resist and remediate heavy metal pollution. In addition, the role of different types of consortia/co-culture in bioremediation has been discussed. Microbes, such as fungi, bacteria, and protozoa can remove metals both singly and in amalgamation. Furthermore, an advanced nanotechnology approach for metal ion treatment from wastewater has been briefly discussed. To fully utilize the microbial potential for heavy metal removal and create better strategies to alleviate environmental pollution, a deeper knowledge of the molecular, biochemical, and genetic mechanisms used by these species is required.

Decabromodiphenyl ethane (DBDPE) inhibited the growth and feeding by disrupting the gut and digestive gland homeostasis in octopus Amphioctopus fangsiao (Mollusca: Cephalopoda)

A novel brominated flame retardant decabromodiphenyl ethane (DBDPE) poses a potential threat to animals, but its effects on cephalopods remain unknown. In this study, Amphioctopus fangsiao, a common octopus in China, was exposed to DBDPE (0, 1, 50, 100, 300 μg/L) for 28 days. Chemical analysis revealed that the digestive gland bore a greater burden of DBDPE compared with other tissues. In addition, accumulated DBDPE could curb the growth and feeding performance of A. fangsiao. The potential effects on the “gut-digestive gland axis” were also elucidated. Specifically, DBDPE in the gut shifted the microorganisms toward a Bacteroidetes-dominated composition, and impaired the intestinal epithelial barrier, thereby triggering oxidative stress and inflammation. Excessive DBDPE also threatens the digestive gland function, including histological damage, immune reaction, oxidative stress, glucolipid metabolism dysfunction, and neurotoxicity. Metabolome plasticity enabled A. fangsiao to develop a DBDPE stress-adaptive metabolic profile via alteration of glucolipid metabolism, immunity, oxidative stress, and signaling molecules. Taken together, we identified a new detoxification mechanism linking the microbiota-gut-digestive gland axis with the growth and food intake of A. fangsiao, which is the first time it has been demonstrated in mollusks. These findings provided important clues for a further mechanism study and risk assessment of DBDPE.

Unveiling the chromate stress response in the marine bacterium Bacillus enclensis AGM_Cr8: a multifaceted investigation.

In this study, we introduce Bacillus enclensis AGM_Cr8, a gram-positive marine bacterium isolated from the chronically polluted Versova Creek in Mumbai, India. AGM_Cr8 exhibits robust tolerance to chromate stress, thriving in marine agar media containing up to 3200mg/l of hexavalent chromium [Cr(VI)], with the Minimum Inhibitory Concentration (MIC) established at 5000mg/l. Notably, AGM_Cr8 also displays tolerance to other heavy metals, including Lead [Pb (II)] (1200mg/l), Arsenic [As (III)] (400mg/l), Cadmium [Cd(II)] (100mg/l), and Nickel [Ni(II)] (100mg/l). Scanning Electron Microscopy (SEM) reveals the presence of Cr(VI) on the bacterial surface, accompanied by the secretion of extracellular polymeric substances (EPSs) facilitating Cr(VI) sequestration. This observation is validated through Energy Dispersive Spectroscopy (EDS). Transmission Electron Microscopy (TEM) and Scanning Transmission Electron Microscopy-Energy Dispersive Spectroscopy (STEM-EDS) confirm internal bioaccumulation of Cr(VI). X-ray photoelectron spectroscopy (XPS) identifies distinct peaks around 579 and 576eV, indicating the coexistence of Cr(VI) and Cr(III), implying a bioreduction mechanism. De novo genome sequencing identifies twenty-two chromate-responsive genes, including putative chromate transporters (srpC1 and srpC2), suggesting an efflux mechanism. Other identified genes encode NAD(P)H-dependent FMN-containing oxidoreductase, NADH quinone reductase, ornithine aminotransferase, transporter genes (natA, natB, ytrB), and genes related to DNA replication and repair (recF), DNA mismatch repair (mutH), and superoxide dismutase. We therefore, propose a chromate detoxification pathway that involves an interplay of chromate transporters, enzymatic reduction of Cr(VI) to Cr(III), DNA repair and role of antioxidants in response to chromate stress. We have highlighted the potential of AGM_Cr8 for bioremediation in chromium-contaminated environments, given its robust tolerance and elucidated molecular mechanisms for detoxification.

Cadmium Contamination in Aquatic Environments: Detoxification Mechanisms and Phytoremediation Approach

The increased presence of cadmium in the environment can lead to its increase in the food chain, particularly due to its accumulation in the consumable parts of plants. For humans, ingesting food containing high levels of Cd is a significant exposure pathway. Being a non-essential and non-metabolized element, it is harmful to microorganisms, animals, plants, and humans, even in minimal concentrations. As a result, there is a need for the remediation of both natural and urban environments. Bioremediation is a sustainable and eco-friendly technique for cleaning up the environment and reducing contamination of living organisms. This review explores the potential of phytoremediation, a bioremediation approach that utilizes plants as agents for decontamination, as a method to restore such areas. Certain plants, particularly macrophytes, are capable of remediating Cd. In response to induced stress, plants activate various tolerance mechanisms, including antioxidant enzyme systems (as peroxidase, catalase, ascorbate peroxidase, superoxide dismutase, and glutathione peroxidase) as well as non-enzymatic pathways (like phytochelatins). However, a thorough understanding of these tolerance mechanisms is essential for optimizing this method, especially for application in aquatic environments. This study will, therefore, review the existing tolerance and detoxification mechanisms for Cd, along with bioremediation strategies. The application of this eco-friendly approach is highly correlated with the three main areas required for sustainability: economic, environmental and social.

α-Tocopherol Long-Chain Metabolite α-T-13'-COOH Exhibits Biphasic Effects on Cell Viability, Induces ROS-Dependent DNA Damage, and Modulates Redox Status in Murine RAW264.7 Macrophages.

The α-tocopherol long-chain metabolite α-tocopherol-13'-hydroxy-chromanol (α-T-13'-COOH) is a proposed regulatory intermediate of endogenous vitamin E metabolism. Effects of α-T-13'-COOH on cell viability and adaptive stress response are not well understood. The present study aims to investigate the concentration-dependent effects of α-T-13'-COOH on cellular redox homeostasis, genotoxicity, and cytotoxicity in murine RAW264.7 macrophages as a model system. Murine RAW264.7 macrophages are exposed to various dosages of α-T-13'-COOH to determine its regulatory effects on reactive oxygen species (ROS) production, DNA damage, expression of stress-related markers, and the activity of ROS scavenging enzymes including superoxide dismutases, catalase, and glutathione-S-transferases. The impact on cell viability is assessed by analyzing cell proliferation, cell cycle arrest, and cell apoptosis. α-T-13'-COOH influences ROS production and induces DNA damage in a dose-dependent manner. The metabolite modulates the activity of ROS-scavenging enzymes, with significant changes observed in the activities of antioxidant enzymes. A biphasic response affecting cell viability is noted: sub-micromolar doses of α-T-13'-COOH promote cell proliferation and enhance DNA synthesis, whereas supraphysiological doses lead to DNA damage and cytotoxicity. It hypothesizes an adaptive stress response, characterized by upregulation of ROS detoxification mechanisms, enhanced cell cycle arrest, and increased apoptosis, indicating a correlation with oxidative stress and subsequent cellular damage.

Comparative Analysis of Phytochemicals and Gene Expression in Soybean (Glycine max) Under Acute Moderated and Severe Elevated Ozone: Unravelling the Role of Antioxidant Defence

ABSTRACTThe increasing concentrations of ground‐level ozone (O3) resulting from industrialisation and anthropogenic activities present a substantial environmental threat to agricultural productivity, particularly affecting O3‐sensitive crops such as soybeans. The effects of acute O3 exposure on soybean yield attributes and seed quality and whether soybean showed different detoxification mechanisms in response to moderate and severe O3 stress are not extensively explored. In this study, soybean seedlings were exposed to moderate (80 nmol mol−1) and acute severe (200 nmol mol−1) O3 stress, and then growth parameters, yield attributes, reactive oxygen species (ROS) levels, enzymatic and non‐enzymatic antioxidant properties and associated gene expression in the leaves were assessed. The results revealed that moderate O3 exposure enhanced growth parameters but reduced the 100‐grain weight, while acute severe exposure sharply depressed growth parameters, yield attributes and the 100‐grain weight. Moderate O3 fumigation significantly increased hydrogen peroxide (H2O2) levels and catalase (CAT) activity from 4 to 32 h. Acute severe O3 stress induced the overproduction of superoxide anions (O2.−) and H2O2 during nearly the whole experiment period, but only enhanced superoxide dismutase (SOD) activity at 32 h, and showed no stimulatory effects on CAT activity. Additionally, the relative expression levels of the SOD and CAT gene family in soybean leaves exposed to elevated O3 were upregulated, peaking at 8 h. Moderate O3 treatment enhanced reduced glutathione (GSH) and ascorbate (AsA) levels and increased the activities of AsA–GSH cycle‐related enzymes. In contrast, acute severe O3 exposure inhibited GSH and AsA contents and markedly suppressed AsA–GSH cycle‐related enzymes, particularly from 8 to 32 h. Redundancy analysis indicated that CAT and AsA play crucial roles in scavenging O3‐induced ROS under moderate stress, while ascorbate peroxidase (APX) and GSH were more effective under acute severe stress conditions. These findings provide insights into the differential impacts of acute O3 stress on soybeans, emphasising the importance of considering both crop yield and grain quality in assessing O3 risks to crops.

Location-dependent effect of microplastic leachates on the respiration rate of two engineering mussel species.

Microplastics are ubiquitous in the world's oceans and pose serious environmental concerns, including their ingestion and the release of potentially toxic mixtures of intrinsic and extrinsic chemical compounds (i.e. leachates; MPLs). Mussels, as key intertidal bioengineers and filter-feeders are particularly susceptible to both exposure pathways. While the effects of microplastic ingestion have been widely investigated, research on the impacts of MPLs has only recently begun. This study examined the influence of MPLs derived from beached pellets collected in two separate regions, namely France and Portugal, on the respiration rates of two key ecosystem engineers, Mytilus edulis and Mytilus galloprovincialis. Possibly due to distinct mixtures of leached chemicals, unlike Portuguese-MPLs, exposure to French-MPLs significantly decreased the respiration rate of both mussel species. This research provides new insights into the physiological impacts of MPLs on bioengineer species, highlighting the importance of MP source and potential cascading effects at the ecosystem level. While we reported significant effects on mussel respiration after acute MPL exposure, future research should investigate long-term impacts and potential detoxification mechanisms to clarify the effects of MPs on mussel physiological performance and their potential consequences on specie fitness.

Reversing Zearalenone Toxicity: The Role of Hydroxytyrosol in Zebrafish.

Zearalenone (ZEA) is a widely distributed mycotoxin that presents a substantial worldwide health risk to animals. Several natural compounds have shown promise in mitigating the detrimental impacts of ZEA. This study examined the detoxification potential of previously identified compounds by utilizing zebrafish embryos as a model organism. Hydroxytyrosol stands out among these natural compounds. Our findings indicate that hydroxytyrosol effectively mitigated mortality, hatching delay, and phenotypic abnormalities induced by ZEA in the assessed embryos. Furthermore, hydroxytyrosol restored the frequency and intensity of tail coiling (TC) while decreasing the expression of heat shock proteins (HSPs) in the zebrafish embryos. Extended incubation with hydroxytyrosol demonstrated protective effects on zebrafish growth and morphology, muscle birefringence, and touch-evoked escape behavior. Subsequent investigations indicated that hydroxytyrosol reversed the expression of proapoptotic targets (e.g., bax and caspase8) and cell cycle regulators (e.g., p21, gadd45a, and rbl2), thereby mitigating apoptosis and G2 cell cycle arrest induced by ZEA in zebrafish embryos. Additionally, hydroxytyrosol decreased staining for senescence associated-β-galactosidase (SA-β-Gal). Notably, p53/FoxO pathway plays an important role in detoxification mechanisms. Overall, these novel findings highlight the potential of hydroxytyrosol to reverse ZEA-induced toxicity in multiple aspects. The mitigating effect of hydroxytyrosol on ZEA toxicity may have been underestimated.

Balancing Growth and Defense: Nanoselenium and Melatonin in Tea (Camellia sinensis) Protection against Glufosinate.

Current crop stress resistance research suggests that the prominent stimulants nanoselenium (NSe) and melatonin (MT) might improve tea safety, quality, and stress resistance induced by the widely used nonselective herbicide glufosinate (GLU). Their biofortification effects on tea growth, antioxidant activity, and secondary metabolism pathways response to GLU remain unclear. Here, NSe, MT, and their combination NSe-MT effectively reduced 26.6-50.9% GLU and its metabolites in tea seedlings, balanced the photosystem, enhanced antioxidant defenses, and optimized reactive oxygen species scavenging mechanisms. Further, GLU-induced inhibition of glutamine synthetase (11.2-34.0%), ammonium toxicity (55.0-64.7%), and nitrogen metabolism disorders were alleviated. Stimulants exhibited different preferences in the accumulation of l-theanine (8.4-47%), gamma-aminobutyric acid (10.3-41.7%), and catechins (13.1-73.1%, excluding ECG), thereby influencing tea quality. Transcriptomic and metabolomic analyses validated that NSe-MT had a more pronounced impact on tender tea leaves than individual stimulant treatments. All stimulants reduced GLU-induced excessive jasmonic acid (29.8-50.5%) production and signaling responses, revealing their significance in crop physiological activities under herbicide or nitrogen stress. The reduction in aromatic amino acids helped mitigate GLU's interference with phenylpropanoid biosynthesis, leading to inhibited lignin production but enhanced nutritional flavonoid levels, such as catechins. NSe and NSe-MT demonstrated promising potential as herbicide safeners. These findings provided insights into GLU detoxification mechanisms in other nontarget crops as well.

Zinc Oxide Nanoparticle-Mediated Root Metabolic Reprogramming for Arsenic Tolerance in Soybean.

Arsenate (AsV) is absorbed and accumulated by plants, which can affect their physiological activities, disrupt gene expression, alter metabolite content, and influence growth. Despite the potential of zinc oxide nanoparticles (ZnONPs) to mitigate the adverse effects of arsenic stress in plants, the underlying mechanisms of ZnONPs-mediated detoxification of AsV, as well as the specific metabolites and metabolic pathways involved, remain largely unexplored. In this study, we demonstrated root metabolomic profiling of soybean germinating seedlings subjected to 25 μmol L-1 arsenate (Na2HAsO4) and ZnONPs at concentrations of 25 μmol L-1 (ZnO25) and 50 μmol L-1 (ZnO50). The objective of this study was to examine the effects on soybean root metabolomics under AsV toxicity. Metabolomic analysis indicated that 453, 501, and 460 metabolites were significantly regulated in response to AsV, ZnO25, and ZnO50 treatments, respectively, compared to the control. Pathway analysis of the differentially regulated metabolites (DRMs) revealed that the tricarboxylic acid (TCA) cycle, glutathione metabolism, proline and aldarate metabolism, and arginine and proline metabolism were the most statistically enriched pathways in ZnONPs-supplemented plants. These findings suggest that ZnONPs enhance the tolerance response to AsV. Collectively, our results support the hypothesis that ZnONPs fertilization could be a potential strategy for improving soybean crop resilience under AsV stress.

Cadmium uptake and transport in vegetables near a zinc–lead mine: Novel insights from Cd isotope fractionation

In this study, Cd isotope analysis was conducted on drought-tolerant (cowpea and sesame) and less drought-tolerant vegetables (water spinach, green pepper, and mung bean) to elucidate the mechanisms underlying Cd uptake and transport. Cd isotopes in plants were identical to or lighter than those in the available pool and exhibited negative fractionation from roots to straws (Δ114/110Cd = −0.22 ‰ to −0.17 ‰) in drought-tolerant vegetables, whereas contrasting results were obtained for less drought-tolerant vegetables (Δ114/110Cd = −0.050 ‰ to 0.39 ‰). Positive Cd isotope fractionation from straws to fruits in drought-tolerant vegetables (Δ114/110Cd = 0.33 ‰ ± 0.03 ‰ and 0.10 ‰ ± 0.03 ‰, respectively) was observed, whereas negligible or negative fractionation was found in less drought-tolerant vegetables (Δ114/110Cd = 0.01 ‰ ± 0.04 ‰ and −0.34 ‰ ± 0.02 ‰, respectively). The vast secretion of organic acids might have led to positive available pool-to-roots and negative roots-to-straws isotope fractionation in drought-tolerant vegetables. In contrast, preferential xylem transport resulted in negative straws-to-fruits isotope fractionation in less drought-tolerant vegetables. This study demonstrated that Cd isotope fractionation in the soil-plant system is associated with plant drought tolerance, and drought-tolerant and less-tolerant plants developed a distinct Cd detoxification mechanism, corresponding to a reversed fractionation of Cd isotopes.

Influences of blue and red light irradiations on Cd phytoexcretion using Festuca arundinacea.

Although phytoremediation is more economical when compared with traditional physical and chemical soil remediation methods, it remains very expensive when considering the substantial area of the contaminated field. If the quantity of harvested residues can be reduced after each phytoremediation cycle, the practicability and commercial implementation of this environment friendly method can be improved. In this study, cadmium excretion on the leaf surface of Festuca arundinacea was evaluated under various blue and red light conditions. The results indicated that the percentage of decaying and deceased leaves increased by 8.5%, 31.1%, 59.7%, and 35.9% at a blue light ratio of 10%, 50%, 75%, and 100%, respectively, when compared with the control. The highest cadmium concentration was found in decaying and deceased leaves under 75% blue light treatment. Light treatments also altered the excreted cadmium amount on different leaf types. Under all treatments including the control, significantly more cadmium can be washed off from emerging and mature leaves than from decaying and deceased leaves, owing to the detoxification mechanism of the plant (p < 0.05). The differences in cadmium excretion on senescent and dead leaves under all treatments were not statistically significant, but the mass of cadmium excretion on young leaves under 75% and 100% blue light irradiation were significantly higher than that under other treatments (p < 0.05). Herein, a novel phytoremediation method involving the harvesting decaying and deceased leaves and washing emerging and mature leaves was proposed to decrease the costs of plant residue disposal.

Beta-cypermethrin-induced stress response and ABC transporter-mediated detoxification in Tetrahymena thermophila

β-Cypermethrin (β-CYP), a synthetic pyrethroid pesticide, is widely used for insect management. However, it also affects non-target organisms and pollutes aquatic ecosystems. Tetrahymena thermophila, a unicellular ciliated protist found in fresh water, is in direct contact with aquatic environments and sensitive to environmental changes. The proliferation of T. thermophila was inhibited and the cellular morphology changed under β-CYP stress. The intracellular ROS level significantly increased, and SOD activity gradually rose with increasing β-CYP concentrations. Under 25 mg/L β-CYP stress, 687 genes were up-regulated, primarily enriched in the organic cyclic compound binding and heterocyclic compound binding pathways. These include 8 ATP-binding cassette transporters (ABC) family genes, 2 cytochrome P450 monooxygenase genes, and 2 glutathione peroxidase related genes. Among of them, ABCG14 knockdown affected cellular proliferation under β-CYP stress. In contrast, overexpression of ABCG14 enhanced cellular tolerance to β-CYP. The results demonstrated that Tetrahymena tolerates high β-CYP concentration stress through various detoxification mechanisms, with ABCG14 playing a crucial role in detoxification of β-CYP.

The strategy of using heme proteins and synthetic porphyrins as injectable antidotes for fire gas poisoning

Abstract During fire accidents, 2 highly toxic components of fire smoke, carbon monoxide (CO) and hydrogen cyanide (HCN), are produced simultaneously, and more than 50% of fire-related deaths can be attributed to the inhalation of these toxic gases. Despite the different CO and HCN detoxification mechanisms, oxygen (O2) ventilation is currently the primary clinical treatment, and no alternative methods are available at present. In this review, the toxicological mechanisms of CO and HCN are investigated with an emphasis on the toxic effects of their combination. On the basis of these toxic mechanisms, the advantages and disadvantages of the current clinical detoxification methods are analyzed and discussed. We also summarize the latest advancements in the development of CO- and HCN-scavenging antidotes, highlighting the strategy of using synthetic iron porphyrins that have been synthesized mainly in our laboratory as water-soluble synthetic hemoglobin biomimetics.

The High-Efficiency Degradation of Multiple Mycotoxins by Lac-W Laccase in the Presence of Mediators.

Mycotoxin cocontamination is a severe threat to health and economic security worldwide. The mycotoxins aflatoxin B1 (AFB1), zearalenone (ZEN), deoxynivalenol, T-2 toxin, fumonisin B1, and ochratoxin A are of particular concern due to their substantial toxicity. Lac-W is a laccase with the unique property of degrading these six mycotoxins in the absence of redox mediators. Nevertheless, their degradation rates are low. This work aims to improve the ability of Lac-W to degrade these six mycotoxins and to elucidate its detoxification mechanism. Including redox mediators increased the Lac-W degradation efficiency drastically, and completely degraded AFB1 and ZEN within one hour. Additionally, Lac-W-AS has good temperature, pH, and ions adaptability in ZEN degradation. Lac-W-AS reduced the ZEN toxicity because ZEN degradation products significantly restored the bioluminescence intensity of Vibrio fischeri. A Lac-W-AS-mediated oxidation product of ZEN was structurally characterized as 15-OH-ZEN by UHPLC-MS/MS. Linear sweep voltammetry showed that AS affected the potential of Lac-W and accelerated the oxidation of ZEN. Finally, the combination of mediators (acetosyringone and 2,2'-azino-bis (3-ethylbenzothiazoline-6-sulfonate)) improved the degradation rate of mycotoxins. This work highlights that the combination of Lac-W with mediators serves as a good candidate for degrading multi-mycotoxin contaminants in food and feedstuff.

The biochemistry of the carcinogenic alcohol metabolite acetaldehyde

Acetaldehyde (AcH) is the first metabolite of ethanol and is proposed to be responsible for the genotoxic effects of alcohol consumption. As an electrophilic aldehyde, AcH can form multiple adducts with DNA and other biomolecules, leading to function-altering and potentially toxic and carcinogenic effects. In this review, we describe sources of AcH in humans, including AcH biosynthesis mechanisms, and outline the structures, properties and functions of AcH-derived adducts with biomolecules. We also describe human AcH detoxification mechanisms and discuss ongoing challenges in the field.

The influence of inactivated entomopathogenic bacterium Bacillus thuringiensis on the immune responses of the Colorado potato beetle.

Invasion of microorganisms into the gut of insects triggers a cascade of immune reactions accompanied by increased synthesis of effectors (such as antimicrobial peptides, cytokines, and amino acids), leading to changes in the physiological state of the host. We hypothesized that even an inactivated bacterium can induce an immune response in an insect. The aim of this study was to compare the roles of reactive oxygen species (ROS) formation and of the response of detoxification and antioxidant systems in a Colorado potato beetle (CPB) larval model in the first hours after invasion by either an inactivated or live bacterium. The influence of per os inoculation with inactivated entomopathogenic bacterium Bacillus thuringiensis var. tenebrionis (Bt) on the survival and physiological and biochemical parameters of CPB larvae was assessed as changes in the total hemocyte count (THC), activity of phenoloxidases (POs), glutathione-S-transferases (GSTs), nonspecific esterases (ESTs), catalase, peroxidases, superoxide dismutases (SODs) and formation of reactive oxygen species (ROS). A series of changes occurred within the hemolymph and the midgut of CPBs inoculated with inactivated Bt at 12 h after inoculation. These physiological and biochemical alterations serve to mediate generalized resistance to pathogens. The changes were associated with an increase in the THC and a 1.4-2.2-fold enhancement of detoxification enzymatic activities (such as GST and EST) as well as increased levels of antioxidants (especially peroxidases) in hemolymph in comparison to the control group. Suppressed EST activity and reduced ROS formation were simultaneously detectable in the larval midgut. Inoculation of beetle larvae with active Bt cells yielded similar results (elevated THC and suppressed PO activity). A fundamental difference in the immune activation processes between larvae that ingested the inactivated bacterium and larvae that had consumed the active bacterium was that the inactivated bacterium did not influence ROS formation in the hemolymph but did reduce their formation in the midgut. At 24 h postinfection with active Bt, ROS levels went up in both the hemolymph and the midgut. This was accompanied by a significant 5.7-fold enhancement of SOD activity and a 5.3-fold suppression of peroxidase activity. The observed alterations may be due to within-gut toxicity caused by early-stage bacteriosis. The imbalance in the antioxidant system and the accumulation of products toxic to the "putative" pathogen can activate detoxification mechanisms, including those of an enzymatic nature (EST and GST). The activation of detoxification processes and of innate immune responses is probably due to the recognition of the "putative" pathogen by gut epithelial cells and is similar in many respects to the immune response at early stages of bacteriosis.

The role of microbiomes in cooperative detoxification mechanisms of arsenate reduction and arsenic methylation in surface agricultural soil.

Microbial arsenic (As) transformations play a vital role in both driving the global arsenic biogeochemical cycle and determining the mobility and toxicity of arsenic in soils. Due to the complexity of soils, variations in soil characteristics, and the presence and condition of overlying vegetation, soil microbiomes and their functional pathways vary from site to site. Consequently, key arsenic-transforming mechanisms in soil are not well characterized. This study utilized a combination of high-throughput amplicon sequencing and shotgun metagenomics to identify arsenic-transforming pathways in surface agricultural soils. The temporal and successional variations of the soil microbiome and arsenic-transforming bacteria in agricultural soils were examined during tropical monsoonal dry and wet seasons, with a six-month interval. Soil microbiomes of both dry and wet seasons were relatively consistent, particularly the relative abundance of Chloroflexi, Gemmatimonadota, and Bacteroidota. Common bacterial taxa present at high abundance, and potentially capable of arsenic transformations, were Bacillus, Streptomyces, and Microvirga. The resulting shotgun metagenome indicated that among the four key arsenic-functional genes, the arsC gene exhibited the highest relative abundance, followed by the arsM, aioA, and arrA genes, in declining sequence. Gene sequencing data based on 16S rRNA predicted only the arsC and aioA genes. Overall, this study proposed that a cooperative mechanism involving detoxification through arsenate reduction and arsenic methylation was a key arsenic transformation in surface agricultural soils with low arsenic concentration (7.60 to 10.28 mg/kg). This study significantly advances our knowledge of arsenic-transforming mechanisms interconnected with microbial communities in agricultural soil, enhancing pollution control measures, mitigating risks, and promoting sustainable soil management practices.

Phytoremediation of Mercury Contamination: Bibliometric Analysis

Mercury is classified as one of the world’s most toxic and dangerous pollutants as it tends to bioaccumulate and biomagnify within the trophic chain and is persistent. Various approaches are available to remediate Hg-affected sites including phytoremediation, which includes the use of plants to clean up contaminated environments. The phytoremediation of mercury contamination is attracting increasing attention because of its advantages: it is environmentally friendly, inexpensive, simple, and can improve soil fertility. In this report, VOSviewer (version 1.6.1) and Bibliometrix (version 4.16) software were used to analyze 457 and 697 documents published from 2000 to 2023, retrieved from the databases WoS and Scopus, respectively. China, India, the United States, and Spain were the top four most productive countries. The largest topic area was environmental sciences, and the Chinese Academy of Sciences was the organization that contributed the most to the overall number of publications. The keywords with the highest frequency excluding phytoremediation and mercury in WoS were heavy metals, accumulation, cadmium, soils, and phytoextraction. In Scopus, the most frequent keywords were bioremediation, heavy metals, soil pollution, bioaccumulation, biodegradation, and environmental. From the above analysis, we concluded that future research should focus on (1) finding native plants, (2) genetic engineering applications, (3) increasing remediation ability through assisted phytoremediation, and (4) the detoxification mechanism of mercury. This study provides insights into trending themes and serves as a reference for future research.

Transcriptomic data reveals an auxiliary detoxification mechanism that alleviates formaldehyde stress in Methylobacterium sp. XJLW

Methylobacterium sp. XJLW converts formaldehyde into methanol and formic acid via a Cannizzaro reaction in response to environmental formaldehyde stress. Methanol is further assimilated without formaldehyde or formic acid formation, whereas formic acid accumulates without undergoing further metabolism. Synthetic biology-based biotransformation of methanol to generate additional products can potentially achieve carbon neutrality. However, practical applications are hampered by limitations such as formaldehyde tolerance. In this study, we aimed to explore the specific mechanism of strain XJLW in response to formaldehyde stress. Thus, a transcriptomic analysis of XJLW under formaldehyde treatment was performed, revealing changes in the expression of specific genes related to one-carbon metabolism. Central metabolic genes were downregulated, whereas metabolic bypass genes were upregulated to maintain methanol assimilation in XJLW’s response to formaldehyde treatment. In total, 100 genes potentially related to methyl transfer were identified. The function of only one gene, RS27765, was similar to that of glyA, which encodes a methyltransferase involved in one-carbon metabolism. The double-mutant strain, lacking RS27765 and glyA, lost its ability to grow in methanol, whereas the single-mutant strain, lacking only one of these genes, still grew in methanol. Co-expression of RS27765 and RS31205 (YscQ/HrcQ type III secretion apparatus protein) enabled Escherichia coli BL21 (DE3) to effectively degrade methanol. Using protein sequence analysis and molecular docking, we proposed a model wherein RS27765 is necessary for cell growth by using methanol generated via formaldehyde cannizzaro reaction. This process enables direct assimilation of methanol without producing formaldehyde and formic acid as intermediate metabolites. The RS27765 gene cluster, in conjunction with metabolic bypass genes, constitutes a novel auxiliary pathway facilitating formaldehyde stress tolerance in the strain.