Determination Of Redox Potentials Research Articles

Eukaryotic plankton species diversity and community structure in the Xiao Jiang River (the primary tributary of Upper Yangtze River), Yunnan.

The Xiao Jiang River, as a crucial element of ecological restoration in the upper reaches of the Yangtze River, plays an indispensable role in agricultural water utilization and water ecology within its watersheds. The water quality status of the Xiao Jiang River not only impacts local water-ecological equilibrium and economic benefits but also holds paramount importance for sustaining ecosystem health in the Yangtze River basin. Plankton surveys and environmental physicochemical detection were conducted in the major channel region of the Xiao Jiang River in dry and wet periods in 2022 to better understand the diversity of eukaryotic plankton and its community structure characteristics. Environmental DNA is an emerging method that combines traditional ecology with second-generation sequencing technology. It can detect species from a single sample that are difficult to find by traditional microscopy, making the results of plankton diversity studies more comprehensive. For the first time, environmental DNA was used to investigate eukaryotic plankton in the Xiao Jiang River . The results showed that a total of 881 species of plankton from 592 genera in 17 phyla were observed. During the dry period, 480 species belonging to 384 genera within17 phyla were detected, while, during the wet period, a total of 805 species belonging to 463 genera within 17 phyla were recorded. The phylum Ciliophora dominated the zooplankton, while the phylum Chlorophyta and Bacillariophyta dominated the phytoplankton. The presence of these dominant species indicate that the water quality conditions in the study area are oligotrophic and mesotrophic. Principal coordinate analysis and difference test showed that the number of plankton ASVs, abundance, species richness, dominating species, and diversity indices differed between the dry and wet periods. Spearman correlation analysis and redundancy analysis (RDA) of relative abundance data with environmental physicochemical factors revealed that water temperature (WT), dissolved oxygen (DO), potential of hydrogenacidity (pH), ammonia nitrogen (NH3-N), total nitrogen (TN), electrical conductivity (EC) and the determination of redox potential (ORP) were the main environmental physicochemical factors impacting the plankton community structure. The results of this study can serve as a provide data reference at the plankton level for water pollution management in the Xiao Jiang River, and they are extremely important for river ecological restoration and biodiversity recovery in the Yangtze River basin.

Triarylamine-Substituted Benzimidazoliums as Electron Donor-Acceptor Dyad-Type Photocatalysts for Reductive Organic Transformations.

Triarylamine-substituted benzimidazoliums (BI+-PhNAr2), new electron donor-acceptor dyad molecules, were synthesized. Their photocatalytic properties for reductive organic transformations were explored using absorption and fluorescence spectroscopy, redox potential determinations, density functional theory calculations, transient absorption spectroscopy, and reduction reactions of selected substrates. The results show that irradiation of BI+-PhNAr2 promotes photoinduced intramolecular electron transfer to form a long-lived (∼300 μs) charge shifted state (BI•-PhN•+Ar2). In the pathway for photocatalysis of reduction reactions of substrates, BI•-PhN•+Ar2 is subsequently transformed to the neutral benzimidazolyl radical (BI•-PhNAr2) by single-electron transfer from the donor 1,3-dimethyl-2-phenylbenzimidazoline (BIH-Ph) serving as a cooperative agent. Among the benzimidazoliums explored, the bromo-substituted analogue BI+-PhN(C6H4Br-p)2 in conjunction with BIH-Ph demonstrates the most consistent catalytic performance.

Acid-Base Chemistry Provides a Simple and Cost-Effective Route to New Redox-Active Ionic Liquids.

Redox-active ionic liquids (RAILs) hold great promise as high density electrochemical energy storage materials, but are hampered by high costs and low bulk conductivities. In this work, we introduce and electrochemically characterise novel redox-active protic ionic liquids (RAPILs) formed by acid-base neutralisation from cheap and plentiful starting materials. We also demonstrate a novel RAIL-in-IL solvent system for electrochemical characterisation of RAPILs, which enables efficient and cost-effective determination of redox potentials and screening for electrochemical reversibility. Of the redox-active ionic liquids tested in this work, only propylammonium 4-nitrophenylacetate demonstrates completely reversible electrochemistry and preservation of ionic character upon redox cycling under acidic or neutral conditions. Propylammonium 2,5-dihydroxyphenyl-carboxylate also demonstrates two reversible redox processes, but is unstable to oxidation at 0.27 V vs Ag (-0.14 V vs Fc), most likely forming an uncharged benzoquinone species. Using the lessons learned from this prototypical set of RAPILs, we propose design criteria to guide future experimental and computational work.

Redox potential determination of the Hell’s Gate globin I protein facing multiple exogenous ligands

Methylacidiphilum infernorum is a methanotroph bacterium that survives under extreme temperature and pH conditions in which five globins were identified. Among them, Hell’s Gate Globin I (HGbI) is a hemeprotein that presents peculiar features if compared to other globins, like stability at pH 2.8, very high oxygen affinity, and pH-dependent hexacoordination. All these features are likely related to the FeIII/II ion of the heme group whose redox behavior needs to be understood. Herein, we present the spectroelectrochemical determination of the redox potential of the HGbI protein in the absence and presence of relevant heme-binding molecules (cyanide, imidazole, carbon monoxide, nitric oxide and oxygen) in solution and also at different pH values (3.5 to 9.5). The spectroelectrochemical studies were performed giving midpoint redox potential (Em) values of −305, −338, and −442 mV vs normal hydrogen electrode (NHE) for the HGbI unliganded protein and bonded to imidazole and cyanide, respectively. The impressive negative value of the unliganded HGbI indicates it is very improbable to keep it reduced for binding and/or store O2. Interestingly, it was noticed an unusual high affinity of ferrous HGbI to imidazole and cyanide. In addition, the Em values showed pH-dependence, exhibiting a sigmoidal response whose pKa value was calculated at 6.9 likely associated to a sixth heme ligand. In presence of CO and NO, the spectroelectrochemical curves showed hysteresis due to the complete dissociation of the ligands in the oxidized state. Oxidation potentials of 385 and 130 mV vs NHE were determined for CO-HGbI(FeII) and NO-HGbI(FeII) species, respectively. Altogether, these results suggest HGbI protein is likely not involved in the storage nor in the transport of oxygen in the Methylacidiphilum infernorum microorganism. Nevertheless, it is implied the physiological function of HGbI might be related to redox-based processes, which remains to be further elucidated.

Machine Learning for Efficient Prediction of Protein Redox Potential: The Flavoproteins Case.

Determining the redox potentials of protein cofactors and how they are influenced by their molecular neighborhoods is essential for basic research and many biotechnological applications, from biosensors and biocatalysis to bioremediation and bioelectronics. The laborious determination of redox potential with current experimental technologies pushes forward the need for computational approaches that can reliably predict it. Although current computational approaches based on quantum and molecular mechanics are accurate, their large computational costs hinder their usage. In this work, we explored the possibility of using more efficient QSPR models based on machine learning (ML) for the prediction of protein redox potential, as an alternative to classical approaches. As a proof of concept, we focused on flavoproteins, one of the most important families of enzymes directly involved in redox processes. To train and test different ML models, we retrieved a dataset of flavoproteins with a known midpoint redox potential (Em) and 3D structure. The features of interest, accounting for both short- and long-range effects of the protein matrix on the flavin cofactor, have been automatically extracted from each protein PDB file. Our best ML model (XGB) has a performance error below 1 kcal/mol (∼36 mV), comparing favorably to more sophisticated computational approaches. We also provided indications on the features that mostly affect the Em value, and when possible, we rationalized them on the basis of previous studies.

Thermodynamic Modeling of the Fe(II)–Fe(III)–Cu(II)–H2SO4–H2O Solution and Its Application to Determination of Redox Potential during Copper Electrorefining up to 70 °C

A thermodynamic model of the Fe(II)–Fe(III)–Cu(II)–H2SO4–H2O system is developed and shown to reliably simulate the species distribution in the industrial copper electrorefining electrolyte from 25 to 70 °C. The previously developed model of the Fe(II)–Fe(III)–H2SO4–H2O system under leaching conditions was first evaluated, and it proved that its applicability can be extended to a much higher acid concentration (185 g/L). Cu(II) species were then identified, and their thermodynamic data were collected and assessed for modeling calculations. Results reveal that after addition of a high amount of copper (40–50 g/L), Fe(II) is still distributed as free Fe2+, FeHSO4+, and FeSO4°; Fe(III) is distributed as free Fe3+, FeSO4+, FeHSO42+, and Fe(SO4)2–. Cu(II) is dissolved as Cu2+, CuSO4°, and CuHSO4+. The proposed model was validated by reliable and accurate prediction of the measured redox potential throughout all solution conditions. An expression developed previously to predict the redox potential can still be applied in this work. Analysis of speciation results strongly supports that the redox potential of acidic iron sulfate solutions with such a high acid and copper concentration can still be solely determined by the Fe3+/Fe2+ couple. The pH and effective ionic strength were also obtained and discussed. These findings contribute to further investigation on speciation of other solutions during copper production.

Potentiometric determination of redox potentials of system: thiurea and some of its N-substituted

Potentiometric determination of redox potentials of system: thiurea and some of its N-substituted

Synthetic, spectroscopic, structural, and electrochemical investigations of ferricenium derivatives with weakly coordinating anions: ion pairing, substituent, and solvent effects.

A facile and effective strategy for the preparation of a series of ferricenium complexes bearing either electron-donating or electron-withdrawing substituents with weakly coordinating anions such as [B(C6F5)4]- or SbF6- is reported. These systems were thoroughly investigated for their ground state electronic structures in both solution and solid states using infrared (IR) and nuclear magnetic resonance (NMR) spectroscopies as well as single crystal X-ray crystallography and electrochemical measurements. The X-ray structures of the six electron-deficient ferricenium derivatives are of particular interest as only a handful (∼5) of such derivatives have been structurally characterized to date. Comparison of the structural data for both neutral and oxidized derivatives reveals that the nature of the substituents on the cyclopentadienyl (Cp) ligands displays a more significant impact on the metal-ligand separations (FeCt) in the oxidized species than in their neutral analogs. Our 1H-NMR measurements corroborate that in the neutral ferrocene derivatives, electron-donating ring substitutions lead to a greater shielding of the ring protons while electron-withdrawing groups via induction deshield the nearby ring protons. However, the data for the paramagnetic ferricenium derivatives reveals that this substitutional behavior is more complex and fundamentally reversed, which is further supported by our structural studies. We ascribe this reversal of behavior in the ferricenium derivatives to the δ back-donation from the iron atom into the Cp rings which can lead to the overall shielding of the ring protons. Interestingly, our NMR results for the electron-deficient ferricenium derivatives in solution also indicate a direct correlation between the solvent dielectric constant and the energy barrier for rotation around the metal-ligand bond in these systems, whereas such a correlation is absent or not significant in the case of the electron-rich ferricenium species or the corresponding neutral ferrocene analogs. In this work, we also present the electrochemical behavior of the corresponding ferricenium/ferrocene redox couples including potential values (E1/2), peak-to-peak separation (ΔE1/2), and diffusion coefficients (D) of the redox active species in order to provide a concise outline of these data in one place. Our electrochemical studies involved three different solvents and two supporting electrolytes. Notably, our findings point to the significant effect of ion-pairing in lowering the energy necessary for reduction of the ferricenium ion and E1/2 in lower-polarity media. This has significant implications in applications of the ferrocene or ferricenium derivatives as redox agents in low-polarity solvents where an accurate determination of redox potential is critical.

Functional metagenomics of the thioredoxin superfamily

Environmental sequence data of microbial communities now makes up the majority of public genomic information. The assignment of a function to sequences from these metagenomic sources is challenging because organisms associated with the data are often uncharacterized and not cultivable. To overcome these challenges, we created a rationally designed expression library of metagenomic proteins covering the sequence space of the thioredoxin superfamily. This library of 100 individual proteins represents more than 22,000 thioredoxins found in the Global Ocean Sampling data set. We screened this library for the functional rescue of Escherichia coli mutants lacking the thioredoxin-type reductase (ΔtrxA), isomerase (ΔdsbC), or oxidase (ΔdsbA). We were able to assign functions to more than a quarter of our representative proteins. The in vivo function of a given representative could not be predicted by phylogenetic relation but did correlate with the predicted isoelectric surface potential of the protein. Selected proteins were then purified, and we determined their activity using a standard insulin reduction assay and measured their redox potential. An unexpected gel shift of protein E5 during the redox potential determination revealed a redox cycle distinct from that of typical thioredoxin-superfamily oxidoreductases. Instead of the intramolecular disulfide bond formation typical for thioredoxins, this protein forms an intermolecular disulfide between the attacking cysteines of two separate subunits during its catalytic cycle. Our functional metagenomic approach proved not only useful to assign in vivo functions to representatives of thousands of proteins but also uncovered a novel reaction mechanism in a seemingly well-known protein superfamily.

Determination of redox potentials of some quinone imines by direct potentiometry

Determination of redox potentials of some quinone imines by direct potentiometry

Effects of iron oxide (Fe3 O4 ) nanoparticles on Escherichia coli antibiotic-resistant strains.

Antibiotic resistance of different bacteria requires the development of alternative approaches for overcoming this phenomenon. The antibacterial effects of iron oxide (Fe3 O4 ) nanoparticles (NPs) (from 50 to 250μgml-1 ) on Escherichia coli antibiotic-resistant strains have been aimed. The study was performed with ampicillin-resistant E.coli DH5α-pUC18 and kanamycin-resistant E.coli pARG-25 stains. Specific growth rate of bacteria (μ), lag phase duration and colony-forming units (CFU) were determined to evaluate growth properties. Fe3 O4 NPs (average size of 10·64±4·73nm) coated with oleic acid and synthesized by modified co-precipitation method were used. The medium pH, H+ efflux, membrane H+ conductance, redox potential determinations and H2 yield assay were done using potentiometer methods. Growth properties were changed by NPs in concentration-dependent manner. NPs decreased (up to twofold) H+ -fluxes through bacterial membrane more in E.coli in the presence of the N,N'-dicyclohexylcarbodiimide, inhibitor of ATPase, indicating that antibacterial activity of these NPs was connected with ATP-associated metabolism. Membrane-associated H2 production was lowered up to twofold. Moreover, the synergetic interactions of NPs and antibiotics were found: combination of NPs and antibiotics provided the higher H+ conductance, lower H+ -fluxes and H2 yield. Fe3 O4 NPs can be suggested as alternative antibacterial agents, which can substitute antibiotics in different applications. The antibacterial effects of Fe3 O4 NPs on the growth properties and membrane activity of E.coli antibiotic-resistant strains have been demonstrated. These NPs have potential as antibacterial agents, which can substitute for antibiotics in bacterial disease treatment in biomedicine, pharmaceutical and environmental applications.

XANES-Based Determination of Redox Potentials Imposed by Steel Corrosion Products in Cement-Based Media.

The redox potential (Eh) in a cementitious nuclear waste repository is critical to the retardation behavior of redox-sensitive radionuclides (RNs), and largely controlled by embedded steel corrosion but hard to be determined experimentally. Here, we propose an innovative Eh determination method based on chemical/spectroscopic measurements. Oxidized nuclides (UVI, SeIV, MoVI, and SbV) were employed as species probes to detect the Eh values imposed by steel (Fe0) and steel corrosion products (magnetite/hematite, and magnetite/goethite couples) in cement pore water. Nuclides showed good sorption affinity, especially toward Fe0, in decreasing Kd order for U > Sb > Se > Mo under both N2 and H2 atmospheres. The reduced nuclide species were identified as UO2, U4O9, FeSe, FeSe2, Se0, Sb0, and Sb2O3, but no redox transformation occurred for Mo. Eh values were obtained by using the Nernst equation. Remarkably, their values fell in a small range centered around -456 mV at pH ∼ 13.5 for both Fe0 and Fe-oxyhydroxides couples. This Eh value appears to be controlled by the nanocrystalline Fe(OH)2/Fe(OH)3 or (Fe1- x,Ca x)(OH)2/Fe(OH)3 couple, whose presence was confirmed by pair distribution function analyses. This approach could pave the way for describing the Eh gradient in reinforced concrete where traditional Eh measurements are not feasible.

Theoretical estimation of redox potential of biological quinone cofactors.

Redox potentials are essential to understand biological cofactor reactivity and to predict their behavior in biological media. Experimental determination of redox potential in biological system is often difficult due to complexity of biological media but computational approaches can be used to estimate them. Nevertheless, the quality of the computational methodology remains a key issue to validate the results. Instead of looking to the best absolute results, we present here the calibration of theoretical redox potential for quinone derivatives in water coupling QM + MM or QM/MM scheme. Our approach allows using low computational cost theoretical level, ideal for long simulations in biological systems, and determination of the uncertainties linked to the calculations. © 2017 Wiley Periodicals, Inc.

Electrical Probes of DNA-Binding Proteins.

A DNA electrochemistry platform has been developed to probe proteins bound to DNA electrically. Here gold electrodes are modified with thiol-modified DNA, and DNA charge transport chemistry is used to probe DNA binding and enzymatic reaction both with redox-silent and redox-active proteins. For redox-active proteins, the electrochemistry permits the determination of redox potentials in the DNA-bound form, where comparisons to DNA-free potentials can be made using graphite electrodes without DNA modification. Importantly, electrochemistry on the DNA-modified electrodes facilitates reaction under aqueous, physiological conditions with a sensitive electrical measurement of binding and activity.

Further insights in DFT calculations of redox potential for iron complexes: The ferrocenium/ferrocene system

We report DFT calculations of the redox potential for the ferrocenium/ferrocene couple in acetonitrile. This system is generally used as an internal reference for non-aqueous solutions and is commonly used for redox potential determination of metal complexes. The set of functionals evaluated includes PBE, B3LYP, M05, M06, M06L and ωB97X-D along with different basis sets. Solvent effects were considered through PCM and SMD continuum models. Also, the multireference character of the system was tested. For all functionals considered structural and energetic analysis were performed in order to explain the calculated redox potentials. Results of multireference test show that a single reference treatment is adequate. A comparison between calculated and experimental parameters suggests that ωB97X-D functional in combination with SDD/cc-pVTZ basis functions and the PCM solvation model provides the best description of the redox potential and the structural and energetic parameters. Thus, a confident prediction of redox potential for the Fc+/Fc system was obtained (0.685V/SHE vs an experimental range of 0.624–0.650V/SHE), which shows new insights for the widespread use of DFT calculations in the study of redox potentials for similar systems.

Mechanistic Perspectives on Organic Photoredox Catalysis for Aromatic Substitutions

Photoredox catalysis has emerged as a powerful tool for the utilization of visible light to drive chemical reactions between organic molecules that exhibit two rather ubiquitous properties: colorlessness and redox-activity. The photocatalyst, however, requires significant absorption in the visible spectrum and reversible redox activity. This very general framework has led to the development of several new modes of reactivity based on electron and energy transfer steps between photoexcited catalyst states and various organic molecules. In the past years, major effort has been devoted to photoredox-catalytic aromatic substitutions involving an initial reductive activation of various aryl electrophiles by the photocatalyst, which opens a new entry into selective arene functionalizations within organic synthesis endeavors. This, however, has led to a unilateral emphasis of synthetic developments including catalyst modifications, substrate scope studies, and combinations with other chemical processes. This Account summarizes recent reports of new protocols for the synthesis of aromatic esters, thioethers, boronates, sulfonates, heterobiaryls, deuteroarenes, and other functionalized arenes under mild photoredox conditions with organic dyes. On the other hand, mechanistic studies were largely neglected. This Account emphasizes the most relevant experiments and techniques, which can greatly assist in the exploration of the mechanistic foundation of aromatic photoredox substitutions and the design of new chemical reactivities. The nature and physicochemical properties of the employed organic dyes, the control of its acid-base chemistry, the choice of the irradiation sources, and the concentrations of substrates and dyes are demonstrated to decisively affect the activity of organic photocatalysts, the chemo- and regioselectivities of reactions, and the operating mechanisms. Several methods of distinction between photocatalytic and radical chain processes are being discussed such as the determination of quantum yields by conventional actinometric studies or modern photon counter devices. Careful analyses of key thermodynamic and kinetic data of the single electron transfer steps involved in aromatic photoredox substitutions by experimental and theoretical techniques are being exemplified with recent examples from the literature including the determination of redox potentials by DFT and CV, fluorescence quenching studies, and transient absorption/emission spectroscopy. This Account provides the uninitiated reader with an overview of the potential of organic photoredox catalysis for aromatic substitution reactions and encourages the practitioners to consult highly instructive synthetic, mechanistic, theoretical, and spectroscopic tools that are available in research laboratories.

Impact of glutathione supplementation of parenteral nutrition on hepatic methionine adenosyltransferase activity

BackgroundThe oxidation of the methionine adenosyltransferase (MAT) by the combined impact of peroxides contaminating parenteral nutrition (PN) and oxidized redox potential of glutathione is suspected to explain its inhibition observed in animals. A modification of MAT activity is suspected to be at origin of the PN-associated liver disease as observed in newborns. We hypothesized that the correction of redox potential of glutathione by adding glutathione in PN protects the MAT activity. AimTo investigate whether the addition of glutathione to PN can reverse the inhibition of MAT observed in animal on PN. MethodsThree days old guinea pigs received through a jugular vein catheter 2 series of solutions. First with methionine supplement, (1) Sham (no infusion); (2) PN: amino acids, dextrose, lipids and vitamins; (3) PN-GSSG: PN+10μM GSSG. Second without methionine, (4) D: dextrose; (5) D+180μM ascorbylperoxide; (6) D+350μM H2O2. Four days later, liver was sampled for determination of redox potential of glutathione and MAT activity in the presence or absence of 1mM DTT. Data were compared by ANOVA, p<0.05. ResultsMAT activity was 45±4% lower in animal infused with PN and 23±7% with peroxides generated in PN. The inhibition by peroxides was associated with oxidized redox potential and was reversible by DTT. Correction of redox potential (PN+GSSG) or DTT was without effect on the inhibition of MAT by PN. The slope of the linear relation between MAT activity and redox potential was two fold lower in animal infused with PN than in others groups. ConclusionThe present study suggests that prevention of peroxide generation in PN and/or correction of the redox potential by adding glutathione in PN are not sufficient, at least in newborn guinea pigs, to restore normal MAT activity.

Series of quinone-containing nanosensors for biologically relevant redox potential determination by surface-enhanced Raman spectroscopy.

Redox potential is of key importance in the control and regulation of cellular function and lifecycle, and previous approaches to measuring the biological redox potential noninvasively in real time are limited to areas of hypoxia or normoxia. In this paper, we extend our previous work on nanoparticle-based intracellular nanosensors to cover a much wider redox potential range of -470 to +130 mV vs NHE, which includes the redox potential range occupied by cells in a state of oxidative stress. The nanosensors are rationally designed to target different areas of this redox potential range and are monitored by surface-enhanced Raman spectroscopy, which will permit noninvasive real-time imaging of cells undergoing oxidative stress.

Development and application of electroanalytical methods in biomedical fields

To summarize our electroanalytical research in the biomedical field over the past 43 years, this review describes studies on specular reflection measurement, redox potential determination, amperometric acid sensing, HPLC with electrochemical detection, and potential oscillation across a liquid membrane. The specular reflection method was used for clarifying the adsorption of neurotransmitters and their related drugs onto a gold electrode and the interaction between dental alloys and compound iodine glycerin. A voltammetric screening test using a redox potential for the antioxidative effect of flavonoids was proposed. Amperometric acid sensing based on the measurement of the reduction prepeak current of 2-methyl-1,4-naphthoquinone (VK3) or 3,5-di-tert-buty1-1,2-benzoquinone (DBBQ) was applied to determine acid values of fats and oils, titrable acidity of coffee, and enzyme activity of lipase, free fatty acids (FFAs) in serum, short-chain fatty acids in feces, etc. The electrode reactions of phenothiazines, catechins, and cholesterol were applied to biomedical analysis using HPLC with electrochemical detection. A three-channel electrochemical detection system was utilized for the sensitive determination of redox compounds in Chinese herbal medicines. The behavior of barbituric acid derivatives was examined based on potential oscillation measurements.

Electrochromic Devices Based on Disubstituted Oxo‐Bipyridinium Ionic Liquids

AbstractElectrochromic symmetric and non‐symmetric disubstituted oxo‐bipyridinium ionic liquids are developed in high purities and yields. Detailed spectroscopic (NMR, FTIR and elemental analysis), thermal (DSC for melting point and glass transition temperatures, Tg determination) and electrochemical (cyclic and square wave voltammetry for determination of redox potential and evaluation of reversibility behaviour) analyses are performed. The most promising electrochromic oxo‐bipyridinium ionic liquids in combination with transparent electrolytes are tested as reversible electrochromic devices. More efficient and sustainable electrochromic devices inspired by bipyridinium ionic liquids can be conceived for industrial applications such as electrochromic car rear‐view mirrors and smart windows.