Dense Blooms Research Articles

Physiological and transcriptomic analyses to determine the responses of the harmful algae Akashiwo sanguinea to phosphorus utilization

Phosphorus (P) is an essential nutrient driving algal growth in aquatic ecosystems. Dissolved inorganic and organic P (DIP and DOP) are the main components in the marine P pools and are closely related to harmful algal blooms. The dinoflagellate Akashiwo sanguinea is a cosmopolitan species which frequently causes dense blooms in estuaries and coasts worldwide, while the availability of P to A. sanguinea still remain unclear. Herein, the physiological and transcriptomic responses of A. sanguinea grown under P-deficient, DIP-replete and DOP-replete conditions were compared. P-deficient adversely suppressed the growth and photosynthesis of A. sanguinea, while genes associated with P transport, DOP utilization, sulfolipid synthesis, and energy production, were markedly elevated. Three forms of DOP, namely, glucose-6-phosphate (G-6-P), adenosine 5-triphosphate (ATP), and β-Glycerol phosphate (SG-P), supported A. sanguinea growth as efficiently as DIP (NaH2PO4), and no significant difference was observed in biochemical compositions and photosynthesis of A. sanguinea between the DIP and DOP treatments. While the genes related to P transporter were markedly suppressed in DOP groups compared with the DIP group. Our results indicated that A. sanguinea is a good growth strategist under P-deficient/replete conditions, and this species had evolved a comprehensive strategy to cope with P deficiency, which might be a crucial factor driving bloom formation in a low inorganic P environment.

The occurrence of positive selection on BicA transporter of Microcystis aeruginosa

The rapid growth of cyanobacteria, particularly Microcystis aeruginosa, poses a significant threat to global water security. The proliferation of toxic Microcystis aeruginosa raises concerns due to its potential harm to human health and socioeconomic impacts. Dense blooms contribute to spatiotemporal inorganic carbon depletion, promoting interest in the roles of carbon-concentrating mechanisms (CCMs) for competitive carbon uptake. Despite the importance of HCO3− transporters, genetic evaluations and functional predictions in M. aeruginosa remain insufficient. In this study, we explored the diversity of HCO3− transporters in the genomes of 46 strains of M. aeruginosa, assessing positive selection for each. Intriguingly, although the Microcystis BicA transporter became a partial gene in 23 out of 46 genomic strains, we observed significant positive sites. Structural analyses, including predicted 2D and 3D models, confirmed the structural conservation of the Microcystis BicA transporter. Our findings suggest that the Microcystis BicA transport likely plays a crucial role in competitive carbon uptake, emphasizing its ecological significance. The ecological function of the Microcystis BicA transport in competitive growth during cyanobacterial blooms raises important questions. Future studies require experimental confirmation to better understand the role of the Microcysits BicA transporter in cyanobacterial blooms dynamics.

Mesoscale variability of phosphorus stocks, hydrological and biological processes in the mixed layer in the Eastern Mediterranean Sea in autumn and during an unusually dense winter phytoplankton bloom

We investigated spatiotemporal variations of nutrients, dissolved organic pools (C, N, P), phosphomonoesterase (PME) and phosphodiesterase (PDE) activities, heterotrophic prokaryotic production and planktonic microorganisms within the mixed layer (ML) in the Eastern Mediterranean Sea. We characterized two contrasted situations: autumn 2018 (highly stratified period, deep chlorophyll maximum within 100 m depth) and winter 2019 (including a bloom period). We compared the distribution of biogeochemical variables within the mixed layer and hydrological vertical structure between the different stations using a principal component analysis. Six groups of stations were identified (one group in autumn, 5 in winter), based on variable physical descriptors but also environmental biogeochemical conditions related to i) the seasonal aspect (for instance, all stations sampled within the Ierapetra anticyclone in autumn clustered in one, single group); ii) transitions between cyclonic and anticyclonic structures with a large range of ML depths (18–269 m) and indications of intense, preceding winter convection events: iii) progression of a high phytoplankton bloom during the winter cruise inferred from a series of observations: a strong nitrate drawdown, important growth of Synechococcus, pico and nano eukaryotes, accumulation of chlorophyll a (>60 mg m−2), primary production rates up to 509 mg C m−2 d−1, changes in the pigments’ diversity, increase in biomass-specific ectoenzymatic activities and of heterotrophic prokaryotic production, all in conjunction with the vicinity of the Rhodes gyre. Here, we studied the distribution of biological and biogeochemical properties within the mixed layer, in particular by employing sensitive methods for the detection of low phosphate concentrations and of the labile dissolved organic phosphorus pool. From this data set, we demonstrate that the surface mixed layer classically considered as a P-depleted and uniform layer in the Eastern Mediterranean Sea was highly biologically dynamic, and prone to rapid spatio-temporal changes in phosphatase activities and phytoplankton dynamics. Altogether, these data reveal a strong short-term population dynamics. The results highlight the role of mixing episodes in winter, which provide pulsed supplies of phosphate and/or nitrate from the deeper layer to the euphotic zone, triggering transient blooms that often go undetected by satellites.

Metabologenomics reveals strain-level genetic and chemical diversity of Microcystis secondary metabolism.

Microcystis spp. are renowned for producing the hepatotoxin microcystin in freshwater cyanobacterial harmful algal blooms around the world, threatening drinking water supplies and public and environmental health. However, Microcystis genomes also harbor numerous biosynthetic gene clusters (BGCs) encoding the biosynthesis of other secondary metabolites, including many with toxic properties. Most of these BGCs are uncharacterized and currently lack links to biosynthesis products. However, recent field studies show that many of these BGCs are abundant and transcriptionally active in natural communities, suggesting potentially important yet unknown roles in bloom ecology and water quality. Here, we analyzed 21 xenic Microcystis cultures isolated from western Lake Erie to investigate the diversity of the biosynthetic potential of this genus. Through metabologenomic and in silico approaches, we show that these Microcystis strains contain variable BGCs, previously observed in natural populations, and encode distinct metabolomes across cultures. Additionally, we find that the majority of metabolites and gene clusters are uncharacterized, highlighting our limited understanding of the chemical repertoire of Microcystis spp. Due to the complex metabolomes observed in culture, which contain a wealth of diverse congeners as well as unknown metabolites, these results underscore the need to deeply explore and identify secondary metabolites produced by Microcystis beyond microcystins to assess their impacts on human and environmental health.IMPORTANCEThe genus Microcystis forms dense cyanobacterial harmful algal blooms (cyanoHABs) and can produce the toxin microcystin, which has been responsible for drinking water crises around the world. While microcystins are of great concern, Microcystis also produces an abundance of other secondary metabolites that may be of interest due to their potential for toxicity, ecological importance, or pharmaceutical applications. In this study, we combine genomic and metabolomic approaches to study the genes responsible for the biosynthesis of secondary metabolites as well as the chemical diversity of produced metabolites in Microcystis strains from the Western Lake Erie Culture Collection. This unique collection comprises Microcystis strains that were directly isolated from western Lake Erie, which experiences substantial cyanoHAB events annually and has had negative impacts on drinking water, tourism, and industry.

Combined effects of toxic Microcystis aeruginosa and high pH on antioxidant responses, immune responses, and apoptosis of the edible freshwater bivalve Corbicula fluminea

Due to increasing anthropogenic perturbation and water eutrophication, cyanobacterial blooms (CYBs) have become a global ecological and environmental problem. Toxic CYBs and elevated pH are considered to be the two key stressors associated with eutrophication in natural waters, particularly in the event of CO2 depletion induced by dense blooms. However, previous research has been focused on investigating the impacts of toxic CYBs or pH changes in isolation, whereas the interactive effects of such stressors on edible bivalves that inhabit CYB waters still lack information. In this study, the combined effects of toxic Microcystis aeruginosa and pH shifts on the antioxidant responses, immune responses, and apoptosis of the edible freshwater bivalve Corbicula fluminea were explored. The results showed that the activity of antioxidant enzymes was significantly impacted by the interactive effects between toxic M. aeruginosa exposure and time course, yet pH shifts showed no significant effects on the activities of these antioxidant enzymes, implying that the antioxidant response in C. fluminea was mainly triggered by toxic M. aeruginosa exposure. Toxic M. aeruginosa also induced an increased production of reactive oxygen species and malondialdehyde in treated clams, particularly under high pH settings. The elevated lysosomal enzyme activity helped C. fluminea defend against toxic M. aeruginosa exposure under high pH conditions. The principal component analysis (PCA) and the integrated biomarker response (IBR) results suggested that the treated clams were subjected to the elevated toxicity of toxic M. aeruginosa in conditions of high pH. The heat shock proteins-related genes might be triggered to resist the oxidative damage in treated clams. Moreover, the upregulation of TNF and casp8 genes indicated the potential activation of the caspase8-mediated apoptotic pathway through TNF receptor interaction, potentially resulting in apoptosis. The TUNEL assay results further confirmed that apoptosis appeared in treated clams. These findings improve our understanding of the combined toxicological effects of harmful algae and pH shifts on bivalves, which will provide insights into a comprehensive ecological risk assessment of toxic CYBs to edible bivalve species.

Margalefidinium polykrikoides dinoflagellate blooms increase mortality of Acartia tonsa copepods

Previous research on phytoplankton blooms has often focused on the initiation of blooms, while studies on the mechanisms underlying bloom decline and termination have been more limited. This study aimed to explore the extent of which Acartia tonsa (copepod) grazing does or does not contribute to Margalefidinium polykrikoides (dinoflagellate) bloom decline. M. polykrikoides is a prominent harmful algal bloom (HAB) species that forms dense blooms in coastal and estuarine systems around the world with known ichthyotoxic effects. Sampling occurred in the lower York River Estuary, Virginia, USA in 2021 and 2022 during two M. polykrikoides blooms. Prey removal experiments were conducted using organisms collected from the field to estimate A. tonsa ingestion rates on M. polykrikoides. While A. tonsa was capable of ingesting M. polykrikoides at low abundance, when M. polykrikoides abundance exceeded 2000 cells mL−1, A. tonsa experienced nearly 100% mortality in the 24-hour prey removal experiments. This suggests that A. tonsa likely cannot exert any top-down control on M. polykrikoides blooms, rather, at high concentrations, M. polykrikoides may act as its own grazing deterrent. Extensive M. polykrikoides blooms could therefore continue to persist due to a reduction in grazing pressure, rather than an increase. This would suggest that the decline of M. polykrikoides blooms is likely caused by another factor. As the frequency, duration, and magnitude of HABs are expected to increase in the future, these findings provide key insights to the trophic interactions that may be influencing the duration of M. polykrikoides blooms.

Enhanced POLYMER atmospheric correction algorithm for water-leaving radiance retrievals from hyperspectral/multispectral remote sensing data in inland and coastal waters.

Accurate retrieval of the water-leaving radiance from hyperspectral/multispectral remote sensing data in optically complex inland and coastal waters remains a challenge due to the excessive concentrations of phytoplankton and suspended sediments as well as the inaccurate estimation and extrapolation of aerosol radiance over the visible wavelengths. In recent years, reasonably accurate methods were established to estimate the enhanced contribution of suspended sediments in the near-infrared (NIR) and shortwave infrared (SWIR) bands to enable atmospheric correction in coastal waters, but solutions to derive the dominant phytoplankton contribution in the NIR and SWIR bands are less generalizable and subject to large uncertainties in the remotely-derived water color products. These issues are not only associated with the standard atmospheric correction algorithm in the SeaDAS processing system but with the non-traditional algorithms such as POLYMER (POLYnomial-based approach established for the atmospheric correction of MERIS data). This study attempts to enhance the POLYMER algorithm to enable atmospheric correction of hyperspectral and multispectral remote sensing data over a wide range of inland and ocean waters. The original POLYMER algorithm is less suitable owing to its complete reliance on a polynomial approach to model the atmospheric reflectance as a function of the wavelength and retrieve the water-leaving reflectance using two semi-analytical models (MM01 and PR05). The polynomial functions calculate the bulk atmospheric contribution instead of using an explicit method to estimate aerosol radiance separately, resulting the erroneous water color products in inland and coastal waters. The modified POLYMER algorithm (mPOLYMER) employs more realistic approaches to estimate aerosol contributions with a combination of UV and Visible-NIR bands and enables accurate retrievals of water-leaving radiance from both hyperspectral and multispectral remote sensing data. To assess the relative performance and wider applicability of mPOLYMER, the original and enhanced algorithms were tested on a variety of HICO, MSI and MODIS-Aqua data and the retrieved Lwn products were compared with AERONET-OC and OOIL-regional in-situ data. Expectedly, the mPOLYMER algorithm greatly improved the accuracy of Lwn (in terms of magnitude and spectral shape) when applied to MODIS-Aqua and HICO data in highly turbid productive waters (with higher concentrations of phytoplankton or with dense algal blooms) in Muttukadu Lagoon, Lake Erie, Yangtze River Estuary, Baltic Sea and Arabian Sea. In contrast, the original POLYMER algorithm overestimated Lwn in the visible and NIR bands and produced unphysical negative Lwn or distorted Lwn spectra in turbid productive waters. The mPOLYMER yielded a relative mean error reduction of more than 50% (i.e., from 79% to 34%) in Lwn for a large number of matchup data. The improved accuracy and data quality is because the mPOLYMER algorithm's funio and coefficients sufficiently accounted for the enhanced backscattering contribution of phytoplankton and suspended sediments in optically complex waters.

An unusually dense bloom of the cyanobacterium Gloeotrichia echinulata in Loch Watten, a Scottish highland loch, during July 2023

An unusually dense bloom of the cyanobacterium Gloeotrichia echinulata in Loch Watten, a Scottish highland loch, during July 2023

Unveiling the responses of Alexandrium pacificum to phosphorus utilization by physiological and transcriptomic analysis

Phosphorus (P) is an essential macronutrient impacting bloom formation of marine dinoflagellates. The dinoflagellate Alexandrium pacificum is a cosmopolitan species known to frequently cause dense blooms in estuarine and coastal waters worldwide, while the physiological and molecular responses of A. pacificum to P utilization are still not well understood. Herein, the growth, P utilization, toxin production and transcriptomes of A. pacificum grown under P-deficient, inorganic P-replete, and organic P-replete conditions were compared. The results indicated that P-deficient adversely affected the growth of A. pacificum and significantly down-regulated the expression of genes related to P transport and material metabolism, but enhanced the production of toxin. On the other hand, no significant differences were observed in growth and toxin production between the organic and inorganic P-replete treatments. However, genes involved in P transport, utilization and TCA cycle were significantly changed in the organic P-replete compared with the inorganic P-replete group, and the mechanisms underlying the use of various organic P compounds were different. These findings suggested that A. pacificum evolved diverse organic P utilization strategies to adapt to low P conditions, which might be a crucial factor driving bloom formation in a low inorganic P environment.

The benefits of restoring urban lakes in the tropics.

Lake restoration in developing economies, particularly in the tropics, is a major challenge given the severe levels of pollution from untreated wastewater and the warm climate conducive to microbial and algal growth. Restoration goals are often ill-defined or unachievable. Here we describe the successes that can be achieved through a control, compared with intervention case study of the two urban lakes in Bengaluru, India, one of the world's largest and fastest growing mega-cities. The unrestored control, Bellandur Lake, was severely polluted by 231 million litres per day (MLD) of untreated wastewater. The restoration site, Jakkur Lake, receives 10 MLD of treated wastewater and also receives some tertiary treatment by circulating the effluent through a constructed wetland before it enters the lake. The water quality of Bellandur Lake can only be described as extremely bad. Organic pollution levels in the main inflow were high (BOD5 of 199mg/l, faecal coliforms 6.9 Log MPN/100ml, total suspended solids (TSS) of 285mg/l) leading to the complete deoxygenation of lake even at the surface. The levels exceeded use-base standards for bathing water and fisheries. The high levels of organic pollution and low oxygen conditions also led to extreme levels of methane emissions that occasionally led to the lake surface catching fire. Total nitrogen (TN) and total phosphorus (TP) concentrations in the lake were extremely high (47mg/l and 6.3mg/l) respectively with low Secchi depth (SD). Despite the high nutrient levels, very little phytoplankton growth occurred (chlorophyll-a of 0mg/l), most likely due to the high TSS loads which restricted light availability. In comparison, the wastewater treatment and wetland at Jakkur Lake markedly reduced organic pollution of the main inflow (BOD5 of 32mg/l, faecal coliforms 4.1 Log MPN/100ml, TSS of 48mg/l). Levels of coliforms in the lake were above the standards for bathing waters. Total nitrogen (TN) and total phosphorus (TP) concentrations in the lake reduced (10.5mg/l, 2.4mg/l) but still classify the lake as extremely hypereutrophic. The lower TSS levels did, however, enable dense phytoplankton blooms to develop (max chlorophyll-a of 600 µg/l) which are in part responsible for the higher levels of dissolved oxygen in the lake water, albeit and as expected with large diurnal fluctuations. The comparison highlights the benefits that standard wastewater treatment provides to restore urban tropical lakes in context of rapidly urbanising catchments, and even though Jakkur Lake is by no means fully restored, it sustains water quality that allow propagation of fisheries and shore-based recreation. It also greatly contributes to greenhouse gas emission reductions. Further restoration measures are likely needed for urban tropical lakes, particularly to tackle pollutant loads in monsoon periods, but restoring community pride in the uses of a lake is an important milestone of the restoration efforts.

Identification of algal rich microbial blooms in the Sellafield Pile Fuel Storage Pond and the application of ultrasonic treatment to control the formation of blooms.

The presence of microorganisms in a range of nuclear facilities has been known for many years. In this study the microbial community inhabiting the Pile Fuel Storage Pond (PFSP), which is a legacy open-aired facility on the Sellafield nuclear site, Cumbria, UK, was determined to help target microbial bloom management strategies in this facility. The PFSP is currently undergoing decommissioning and the development of prolonged dense microbial blooms reduces the visibility within the water. Such impairment in the pond water visibility can lead to delays in pond operations, which also has financial implications. Efforts to control the microbial population within the PFSP are ongoing, with the installation of ultrasonic treatment units. Here next generation sequencing techniques focussing on broad targets for both eukaryotic and prokaryotic organisms were used to identify the microbial community. On-site monitoring of photosynthetic pigments indicated when microbial blooms formed and that eukaryotic algae were most likely to be responsible for these events. The sequencing data suggested that the blooms were dominated by members of the class Chrysophyceae, a group of golden algae, while evidence of cyanobacteria and other photosynthetic bacteria was limited, further supporting eukaryotic organisms causing the blooms. The results of sequencing data from 2018 was used to inform a change in the operational settings of the ultrasonic units, while monitoring of the microbial community and photosynthetic pigments trends was extended. Since the changes were made to the ultrasonic treatment, the visibility in the pond was significantly improved, with an absence of a spring bloom in 2020 and an overall reduction in the number of days lost due to microbial blooms annually. This work extends our knowledge of the diversity of microbes able to colonise nuclear fuel storage ponds, and also suggests that sequencing data can help to optimise the performance of ultrasonic treatments, to control algal proliferation in the PFSP facility and other inhospitable engineered systems.

Towards effective management of the marine-origin Prymnesium parvum (Haptophyta): A growing concern in freshwater reservoirs?

Freshwater ecosystems are highly susceptible to harmful algal blooms (HABs), which are often caused by monospecific dense blooms. Effective preventive management strategies are urgently needed to avoid wide-ranging and severe impacts often resulting in costly damage to resources and unsustainable management options. In this study, we utilized SDM techniques focused on Prymnesium parvum, one of the most notorious HABs species worldwide. We first compare the climatic space occupied by P. parvum in North America, Europe and Australia. Additionally, we use MaxEnt algorithm to infer, for the first time, the potentially suitable freshwater environments in the aforementioned ranges. We also discuss the risks of invasion in reservoirs – prone habitats to persistent blooms of pests and invasive phytoplanktonic species. Our results show populations with distinctive niches suggesting ecophysiological tolerances, perhaps reflecting different strains. Our model projections revealed that the potential extent for P. parvum invasions is much broader than its current geographic distribution. The spatial configuration of reservoirs, if not sustaining dense blooms due to non-optimal conditions, favors colonization of multiple basins and ecoregions not yet occupied by P. parvum. Our models can provide valuable insights to decision-makers and monitoring programs while reducing the resources required to control the spread of P. parvum in disturbed habitats. Lastly, as impact magnitude is influenced by toxicity which in turn varies between different strains, we suggest future studies to incorporate intraspecific genetic information and fine-scale environmental variables to estimate potential distribution of P. parvum.

Effects of the harmful alga Margalefidinium (aka Cochlodinium) polykrikoides on clearance rates of the hard clam, Mercenaria mercenaria

Harmful algal blooms (HABs) such as those formed by the ichthyotoxic dinoflagellate, Margalefidinium (aka Cochlodinium) polykrikoides can have adverse effects on bivalves. While M. polykrikoides has caused significant die offs of bivalves and other marine organisms, the Northern quahog or hard clam, Mercenaria mercenaria, is comparatively more resistant to this HAB. This study quantified clearance rates of juvenile hard clams (10-20 mm) exposed to three different North American populations of M. polykrikoides (bloom, strain CP1, strain CPSB-1G) as well as the nonharmful cryptophyte, Rhodomonas salina and the nonharmful dinoflagellate, Gymnodinium aureolum, in single and mixed algal exposures. Multiple biovolume exposures with M. polykrikoides bloom water and R. salina (1,000, 1,500, 3,000 cells mL-1M. polykrikoides biovolume equivalent) were completed to assess the effects of increasing biomass on hard clam clearance rates and selection. Hard clams opened and actively cleared algal mixtures at and below 1,000 M. polykrikoides cells mL-1. During single species exposures, strain CPSB-1G and R. salina were cleared significantly faster than wild M. polykrikoides populations and strain CP1. During mixed exposures, R. salina was cleared significantly faster than CPSB-1G but not other M. polykrikoides populations and there was no difference between hard clam clearance rates of G. aureolum and R. salina. Clearance rates of M. polykrikoides at ≥1,500 cells mL-1M. polykrikoides/R. salina mixtures were not significantly different than zero unlike clearance of those at <1,000 cells mL-1 indicating a density dependent effect of blooms. Collectively, the results demonstrate that hard clams can actively clear M. polykrikoides cells at moderate (≤1,000 cells mL-1) but not elevated (> 1,000 cells mL-1) bloom densities. Given this, and the documented survival of hard clams during blooms, M. mercenaria may be candidate for aquaculture and restoration in regions prone to HABs caused by M. polykrikoides.

Dinoflagellate vertical migration fuels an intense red tide

Harmful algal blooms (HABs) are increasing globally, causing economic, human health, and ecosystem harm. In spite of the frequent occurrence of HABs, the mechanisms responsible for their exceptionally high biomass remain imperfectly understood. A 50-y-old hypothesis posits that some dense blooms derive from dinoflagellate motility: organisms swim upward during the day to photosynthesize and downward at night to access deep nutrients. This allows dinoflagellates to outgrow their nonmotile competitors. We tested this hypothesis with in situ data from an autonomous, ocean-wave-powered vertical profiling system. We showed that the dinoflagellate Lingulodinium polyedra's vertical migration led to depletion of deep nitrate during a 2020 red tide HAB event. Downward migration began at dusk, with the maximum migration depth determined by local nitrate concentrations. Losses of nitrate at depth were balanced by proportional increases in phytoplankton chlorophyll concentrations and suspended particle load, conclusively linking vertical migration to the access and assimilation of deep nitrate in the ocean environment. Vertical migration during the red tide created anomalous biogeochemical conditions compared to 70 y of climatological data, demonstrating the capacity of these events to temporarily reshape the coastal ocean's ecosystem and biogeochemistry. Advances in the understanding of the physiological, behavioral, and metabolic dynamics of HAB-forming organisms from cutting-edge observational techniques will improve our ability to forecast HABs and mitigate their consequences in the future.

A novel framework to predict chlorophyll-a concentrations in water bodies through multi-source big data and machine learning algorithms.

Eutrophication happens when water bodies are enriched by minerals and nutrients. Dense blooms of noxious are the most obvious effect of eutrophication that harms water quality, and by increasing toxic substances damage the water ecosystem. Therefore, it is critical to monitor and investigate the development process of eutrophication. The concentration of chlorophyll-a (chl-a) in water bodies is an essential indicator of eutrophication in them. Previous studies in predicting chlorophyll-a concentrations suffered from low spatial resolution and discrepancies between predicted and observed values. In this paper, we used various remote sensing and ground observation data and proposed a novel machine learning-based framework, a random forest inversion model, to provide the spatial distribution of chl-a in 2m spatial resolution. The results showed our model outperformed other base models, and the goodness of fit improved by over 36.6% while MSE and MAE decreased by over 15.17% and over 21.26% respectively. Moreover, we compared the feasibility of GF-1 and Sentinel-2 remote sensing data in chl-a concentration prediction. We found that better prediction results can be obtained by using GF-1 data, with the goodness of fit reaching 93.1% and MSE only 3.589. The proposed method and findings of this study can be used in future water management studies and as an aid for decision-makers in this field.

Cuticular waxes affect fruit surface color in blueberries

Societal Impact StatementIn blueberry, fruit color is one of the most important quality traits affecting consumers' choices. Both pigments and waxes impact fruit color; however, their roles have not been clearly elucidated. Here, the contributions of waxes and anthocyanins to fruit color are characterized. A higher content of β‐diketones—the second largest wax group in blueberries—determines a lighter fruit color; hence revealing that, at harvest, waxes contribute more than anthocyanins in determining variations in fruit color among blueberry varieties.Summary Fruit color is one of the major quality traits determining the marketability of fruits by affecting consumers' choices. In blueberries, although fruit surface color is mainly determined by pigments (e.g., anthocyanins), cuticular waxes also play a role in modulating the surface color, and a lighter color given by a dense wax bloom is normally preferred by consumers. This study investigated the content and composition of cuticular waxes and their roles in modulating fruit surface color in 12 (seven northern highbush, three southern highbush, and two hybrids) blueberry genotypes at harvest (H1, representing the first commercial pick, and H2, representing the second commercial pick). The ultrastructural morphology of cuticular waxes was analyzed in four selected genotypes by scanning electron microscopy. The level and profile of anthocyanins and their contributions to the color were also assessed. Total cuticular wax content ranged from 27.7 to 95.8 μg cm−2 among genotypes at H1 and decreased by an average of 23.9% from H1 to H2. Triterpenoids (62.5% of the total cuticular waxes on average) and β‐diketones (22.9% on average) were the first and second largest wax groups in all genotypes, respectively. β‐Diketones were previously proven to affect leaf surface color in wheat; in this study, their content strongly correlated with the lightness of the blueberry surface. Scanning electron microscopy revealed distinct wax morphologies among genotypes. No significant relationships were found between total or individual anthocyanin concentrations and fruit surface color. Our results suggest that, at harvest, variation in the fruit surface color among blueberry genotypes is more closely related to the content and composition of cuticular waxes than the level and profile of anthocyanins, with β‐diketones being particularly important. This study provides new insights for blueberry breeding programs aiming to improve the surface color in order to meet the market demand.

A comparison between the FlowCam 8100, microscopy, and sandwich hybridization assay for quantifying abundances of the saxitoxin-producing dinoflagellate, Alexandrium catenella

Light microscopy, FlowCam, and sandwich hybridization assay (SHA) are three approaches that facilitate the monitoring of harmful algal bloom (HAB) forming phytoplankton. Yet, cross-comparisons among these techniques have not been conducted. This study addressed that gap using the saxitoxin-producing ‘red tide’ dinoflagellate Alexandrium catenella, a species responsible for blooms and paralytic shellfish poisoning worldwide. To achieve this goal, the dynamic ranges of each technique were compared using A. catenella cultures spanning low (pre-bloom), moderate (bloom), and high (dense bloom) levels. To assess field detection, water samples containing very low (<3 cells mL−1) A. catenella levels were collected from Long Island Sound, USA (Jun–Aug 2021) and evaluated using each method. Field samples were also spiked with A. catenella to high (160 cells mL−1) or low (40 cells mL−1) concentrations. In general, microscopy, FlowCam, and SHA returned comparable A. catenella cell concentrations for all tests. Mean cell concentrations from laboratory intercalibration experiments were not significantly different for any method or concentration (ANOVA, p > 0.05). However, relative to microscopy at times SHA produced non-detect signals <2 cells mL−1 in field samples and the FlowCam slightly underestimated cell concentrations when A. catenella abundances were high in laboratory and field samples. Mean cell concentrations of spike experiments were not significantly different for any test date, sampling location, or method, despite variability among methods within the high concentration treatment (ANOVA, p > 0.05 for all treatments). Findings are relevant to HAB researchers, managers, and public health officials because they help reconcile disparate cell abundance datasets that inform numerical models and enhance HAB monitoring and prediction. Results are also likely broadly applicable to several HAB species.

Wind-driven upwelling of iron sustains dense blooms and food webs in the eastern Weddell Gyre

The Southern Ocean is a major sink of anthropogenic CO2 and an important foraging area for top trophic level consumers. However, iron limitation sets an upper limit to primary productivity. Here we report on a considerably dense late summer phytoplankton bloom spanning 9000 km2 in the open ocean of the eastern Weddell Gyre. Over its 2.5 months duration, the bloom accumulated up to 20 g C m−2 of organic matter, which is unusually high for Southern Ocean open waters. We show that, over 1997–2019, this open ocean bloom was likely driven by anomalies in easterly winds that push sea ice southwards and favor the upwelling of Warm Deep Water enriched in hydrothermal iron and, possibly, other iron sources. This recurring open ocean bloom likely facilitates enhanced carbon export and sustains high standing stocks of Antarctic krill, supporting feeding hot spots for marine birds and baleen whales.

Spatial–temporal variability of phytoplankton community and potentially harmful species in the Golden Horn Estuary (Sea of Marmara, Türkiye)

Abstract Spatial–temporal variability of phytoplankton community and potentially harmful species in the Golden Horn Estuary (Sea of Marmara) was investigated from October 2018 to September 2019 together with some environmental factors. A total of 148 phytoplankton taxa were identified during the study period. Among these, 134 taxa (90.5%) consisted of diatoms (71 taxa, 48%) and dinoflagellates (63 taxa, 42.5%), while 14 taxa (9.5%) were other groups. Seventeen species were recorded for the first time in the study area. Species richness was highest in October, while it was lowest in August. The species diversity (H') varied according to sampling stations. Cell abundances were higher especially in the middle and upper estuary in spring and summer than in autumn and winter. The abundance of diatoms and euglenophyceans was highest in spring, while the abundance of raphidophycean and cryptophycean was highest in summer. Temperature was correlated positively with total abundance (P &lt; 0.01), but negatively with species diversity (H') (P &lt; 0.01). Several dense algal blooms causing discolouration in surface water occurred in spring and summer. A total of 12 microalgae species known as potentially toxic were detected during this study period. Among these, dinoflagellates Alexandrium cf. tamarense and Dinophysis infundibulum were recorded for the first time in the study area. The increase in species diversity and richness in the upper estuary, and the decrease in frequency of bloom events compared with the previous years indicated the changes in environmental conditions in this study period. Findings showed that phytoplankton might be used as an indicator of the changing environmental conditions in such ecosystems.

Preservation of Dinoflagellate Cysts in Different Oxygen Regimes: Differences in Cyst Survival between Oxic and Anoxic Natural Environments

This quantitative dinoflagellate cyst study reveals an enormous difference in survival rates in oxygenated versus anoxic sediments. Replicate samples of concentrated natural dinoflagellate cysts with the same initial species composition (1.4 × 104 resting cysts·cm−3 sediment, 61% filled with live-appearing contents) were placed in bags of 20 µm plankton screen. Replicate bags containing 10.0 cm−3 concentrated cyst samples were placed on the seafloor in different environments in Long Island Sound, USA (anoxic and oxygenated), as well as refrigerated in test tubes in the laboratory. Three sets of 15 bags were placed in each environment. Once every year for four consecutive years, three bags were recovered from each set, and the contents were analyzed by cyst counting and germination experiments. An enormous difference in preservation potential between samples in oxygenated versus anoxic environments was revealed. The number of dinoflagellate cysts decreased abruptly within the first year in the oxygen-rich environment; living cysts became very rare (only 5% remained) and also empty walls of cysts disappeared (20% of total cysts remained). In anoxic sediment samples, living cysts also decreased significantly with time, but less quickly. After 1 year, 35% of the living cysts in the anoxic environment and 70% of the living cysts refrigerated in test tubes remained intact. After 4 years, 21% of the cysts with contents in the anoxic environment remained, and 31% in test tubes. The empty cyst walls remained intact for a longer time under anoxic conditions, especially of species known to fossilize well. Germination experiments showed that cysts with live-appearing contents were likely alive, because species with identifiable live-appearing cysts were also identified as vegetative cells in corresponding slurry cultures. The cyst assemblage was dominated by Protoperidinaceae, Dipolopsalidaceae, and Gonyaulacaceae. Of special interest is the ichthyotoxic Margalefodinium polykrikoides, the bloom-forming Peridinium quinquecorne, which has an undescribed resting cyst, and a previously undescribed Krypoperidinium species. The results show greater preservation of dinoflagellate cysts in “dead-zone sea bottoms” and may also provide an answer to the question of the absence of cyst beds in an area despite observed sedimentation of dense blooms.