Litter Degradation Research Articles

Photodegradation in terrestrial ecosystems.

The first step in carbon (C) turnover, where senesced plant biomass is converted through various pathways into compounds that are released to the atmosphere or incorporated into the soil, is termed litter decomposition. This review is focused on recent advances of how solar radiation can affect this important process in terrestrial ecosystems. We explore the photochemical degradation of plant litter and its consequences for biotic decomposition and C cycling. The ubiquitous presence of lignin in plant tissues poses an important challenge for enzymatic litter decomposition due to its biological recalcitrance, creating a substantial bottleneck for decomposer organisms. The recognition that lignin is also photolabile and can be rapidly altered by natural doses of sunlight to increase access to cell wall carbohydrates and even bolster the activity of cell wall degrading enzymes highlights a novel role for lignin in modulating rates of litter decomposition. Lignin represents a key functional connector between photochemistry and biochemistry with important consequences for our understanding of how sunlight exposure may affect litter decomposition in a wide range of terrestrial ecosystems. A mechanistic understanding of how sunlight controls litter decomposition and C turnover can help inform management and other decisions related to mitigating human impact on the planet.

Comparative Genomics of Fungi in Nectriaceae Reveals Their Environmental Adaptation and Conservation Strategies.

This study presents the first genome assembly of the freshwater saprobe fungus Neonectria lugdunensis and a comprehensive phylogenomics analysis of the Nectriaceae family, examining genomic traits according to fungal lifestyles. The Nectriaceae family, one of the largest in Hypocreales, includes fungi with significant ecological roles and economic importance as plant pathogens, endophytes, and saprobes. The phylogenomics analysis identified 2684 single-copy orthologs, providing a robust evolutionary framework for the Nectriaceae family. We analyzed the genomic characteristics of 17 Nectriaceae genomes, focusing on their carbohydrate-active enzymes (CAZymes), biosynthetic gene clusters (BGCs), and adaptations to environmental temperatures. Our results highlight the adaptation mechanisms of N. lugdunensis, emphasizing its capabilities for plant litter degradation and enzyme activity in varying temperatures. The comparative genomics of different Nectriaceae lifestyles revealed significant differences in genome size, gene content, repetitive elements, and secondary metabolite production. Endophytes exhibited larger genomes, more effector proteins, and BGCs, while plant pathogens had higher thermo-adapted protein counts, suggesting greater resilience to global warming. In contrast, the freshwater saprobe shows less adaptation to warmer temperatures and is important for conservation goals. This study underscores the importance of understanding fungal genomic adaptations to predict ecosystem impacts and conservation targets in the face of climate change.

Nitrogen Deposition Reduces the Rate of Leaf Litter Decomposition: A Global Study

The litter decomposition of plant leaves is a vital process in carbon (C) and nitrogen (N) cycling in global terrestrial ecosystems. However, previous assessments of the key determinants of the N deposition effects of litter decomposition have been more controversial. In this meta-analysis, we compared the overall effects of N addition on the litter decomposition rates, litter nutrient content (C and N), and litter constituent (lignin and cellulose) residual rates using a log response ratio approach. Our results showed that exogenous N addition increased the N content and inhibited lignin degradation in litter. N deposition decreased the leaf litter decomposition rate by increasing the lignin and N residues and decreasing the litter C content and soil pH. The analysis also concluded that the initial litter C/N ratio, lignin content, and soil pH were main factors in mediating the effect of N deposition on litter decomposition rate. Overall, the results of this study indicate that N deposition can slow decomposition rates by inhibiting N release and lignin degradation of litter. Notably, these results emphasize that the effect of N deposition on litter decomposition mainly depends on the endogenous quality of the litter and soil pH in the decomposition environment.

Microbial nutrient limitation and carbon use efficiency changes under different degrees of litter decomposition.

Alpine ecosystems are important terrestrial carbon (C) pools, and microbial decomposers play a key role in litter decomposition. Microbial metabolic limitations in these ecosystems, however, remain unclear. The objectives of this study aim to elucidate the characteristics of microbial nutrient limitation and their C use efficiency (CUE), and to evaluate their response to environmental factors. Five ecological indicators were utilized to assess and compare the degree of microbial elemental homeostasis and the nutrient limitations of the microbial communities among varying stages of litter decomposition (L, F, and H horizon) along an altitudinal gradient (2800, 3000, 3250, and 3500m) under uniform vegetation (Abies fabri) on Gongga Mountain, eastern Tibetan Plateau. In this study, microorganisms in the litter reached a strictly homeostatic of C content exclusively during the middle stage of litter decomposition (F horizon). Based on the stoichiometry of soil enzymes, we observed that microbial N- and P-limitation increased during litter degradation, but that P-limitation was stronger than N-limitation at the late stages of degradation (H horizon). Furthermore, an increase in microbial CUE corresponded with a reduction in microbial C-limitation. Additionally, redundancy analysis (RDA) based on forward selection further showed that microbial biomass C (MBC) is closely associated with the enzyme activities and their ratios, and MBC was also an important factor in characterizing changes in microbial nutrient limitation and CUE. Our findings suggest that variations in MBC, rather than N- and P-related components, predominantly influence microbial metabolic processes during litter decomposition on Gongga Mountain, eastern Tibetan Plateau.

Combined stress of an insecticide and heatwaves or elevated temperature induce community and food web effects in a Mediterranean freshwater ecosystem

Ongoing global climate change will shift nature towards Anthropocene's unprecedented conditions by increasing average temperatures and the frequency and severity of extreme events, such as heatwaves. While such climatic changes pose an increased threat for freshwater ecosystems, other stressors like pesticides may interact with warming and lead to unpredictable effects. Studies that examine the underpinned mechanisms of multiple stressor effects are scarce and often lack environmental realism. Here, we conducted a multiple stressors experiment using outdoor freshwater mesocosms with natural assemblages of macroinvertebrates, zooplankton, phytoplankton, macrophytes, and microbes. The effects of the neonicotinoid insecticide imidacloprid (1 µg/L) were investigated in combination with three temperature scenarios representing ambient, elevated temperatures (+4 °C), and heatwaves (+0 to 8 °C), the latter two having similar energy input. We found similar imidacloprid dissipation patterns for all temperature treatments with lowest average dissipation half-lives under both warming scenarios (DT50: 3 days) and highest under ambient temperatures (DT50: 4 days) throughout the experiment. Amongst all communities, only the zooplankton community was significantly affected by the combined treatments. This community demonstrated low chemical sensitivity with lagged and significant negative imidacloprid effects only for cyclopoids. Heatwaves caused early and long-lasting significant effects on the zooplankton community as compared to elevated temperatures, with Polyarthra, Daphnia longispina, Lecanidae, and cyclopoids being the most negatively affected taxa, whereas Ceriodaphnia and nauplii showed positive responses to temperature. Community recovery from imidacloprid stress was slower under heatwaves, suggesting temperature-enhanced toxicity. Finally, microbial and macrofauna litter degradation were significantly enhanced by temperature, whereas the latter was also negatively affected by imidacloprid. A structural equation model depicted cascading food web effects of both stressors with stronger relationships and significant negative stressor effects at higher than at lower trophic levels. Our study highlights the threat of a series of heatwaves compared to elevated temperatures for imidacloprid-stressed freshwaters.

Integrating multi-platform assembly to recover MAGs from hot spring biofilms: insights into microbial diversity, biofilm formation, and carbohydrate degradation

BackgroundHot spring biofilms provide a window into the survival strategies of microbial communities in extreme environments and offer potential for biotechnological applications. This study focused on green and brown biofilms thriving on submerged plant litter within the Sungai Klah hot spring in Malaysia, characterised by temperatures of 58–74 °C. Using Illumina shotgun metagenomics and Nanopore ligation sequencing, we investigated the microbial diversity and functional potential of metagenome-assembled genomes (MAGs) with specific focus on biofilm formation, heat stress response, and carbohydrate catabolism.ResultsLeveraging the power of both Illumina short-reads and Nanopore long-reads, we employed an Illumina-Nanopore hybrid assembly approach to construct MAGs with enhanced quality. The dereplication process, facilitated by the dRep tool, validated the efficiency of the hybrid assembly, yielding MAGs that reflected the intricate microbial diversity of these extreme ecosystems. The comprehensive analysis of these MAGs uncovered intriguing insights into the survival strategies of thermophilic taxa in the hot spring biofilms. Moreover, we examined the plant litter degradation potential within the biofilms, shedding light on the participation of diverse microbial taxa in the breakdown of starch, cellulose, and hemicellulose. We highlight that Chloroflexota and Armatimonadota MAGs exhibited a wide array of glycosyl hydrolases targeting various carbohydrate substrates, underscoring their metabolic versatility in utilisation of carbohydrates at elevated temperatures.ConclusionsThis study advances understanding of microbial ecology on plant litter under elevated temperature by revealing the functional adaptation of MAGs from hot spring biofilms. In addition, our findings highlight potential for biotechnology application through identification of thermophilic lignocellulose-degrading enzymes. By demonstrating the efficiency of hybrid assembly utilising Illumina-Nanopore reads, we highlight the value of combining multiple sequencing methods for a more thorough exploration of complex microbial communities.

Cellulolytic potential of mangrove bacteria Bacillus haynesii DS7010 and the effect of anthropogenic and environmental stressors on bacterial survivability and cellulose metabolism

Cellulose degrading bacterial diversity of Bhitarkanika mangrove ecosystem, India, was uncovered and the cellulose degradation mechanism in Bacillus haynesii DS7010 under the modifiers such as pH (pCO2), salinity and lead (Pb) was elucidated in the present study. The abundance of cellulose degrading heterotrophic bacteria was found to be higher in mangrove sediment than in water. The most potential strain, B. haynesii DS7010 showed the presence of endoglucanase, exoglucanase and β-glucosidase with the maximum degradation recorded at 48 h of incubation, with 1% substrate concentration at 41 °C incubation temperature. Two glycoside hydrolase genes, celA and celB were confirmed in this bacterium. 3D structure prediction of the translated CelA and CelB proteins showed maximum similarities with glycoside hydrolase 48 (GH48) and glycoside hydrolase 5 (GH5) respectively. Native PAGE followed by zymogram assay unveiled the presence of eight isoforms of cellulase ranged from 78 kDa to 245 kDa. Among the stressors, most adverse effect was observed under Pb stress at 1400 ppm concentration, followed by pH at pH 4. This was indicated by prolonged lag phase growth, higher reactive oxygen species (ROS) production, lower enzyme activity and downregulation of celA and celB gene expressions. Salinity augmented bacterial metabolism up to 3% NaCl concentration. Mangrove leaf litter degradation by B. haynesii DS7010 indicated a substantial reduction in cellulolytic potential of the bacterium in response to the synergistic effect of the stressors. Microcosm set up with the stressors exhibited 0.97% decrease in total carbon (C%) and 0.02% increase in total nitrogen (N%) after 35 d of degradation while under natural conditions, the reduction in C and the increase in N were 4.05% and 0.2%, respectively. The findings of the study suggest the cellulose degradation mechanism of a mangrove bacterium and its resilience to the future consequences of environmental pollution and climate change.

Influence of species and stand position on isotopic and molecular composition of leaf litter during degradation in an urban mangrove forest

Understanding the diagenetic processes of organic matter (OM) within mangrove forests is essential to grasp ecosystem dynamics and exchanges with adjacent ecosystems. This study investigated the influence of urban runoff on leaf litter degradation in a New Caledonian mangrove forest, subjected to urban rainwater for over 50 years. Focusing on Avicennia marina and Rhizophora stylosa, our objectives were to determine factors affecting leaf litter degradation, assess urban runoff effects on decay rates and element concentrations, and understand OM changes at the molecular level. Litterbags containing senescent leaves placed on the mangrove floor were collected after 7, 14, 28, 56, and 72 days. C and N along with their stable isotopes were evaluated during degradation as well as lignin and neutral carbohydrates contents. Despite lower initial N content, R. stylosa exhibited faster degradation (t1/2 of 36 ± 3 and 28 ± 2 days) than A. marina (t1/2 of 43 ± 9 and 33 ± 4 days), emphasizing the critical role of species position within the mangrove forest regarding tidal immersion. Urban runoff, submerging the urban site, intensified leaf litter degradation, influencing both mass loss and molecular changes in OM. After 72 days of leaf litter degradation, the loss of rhamnose and glucose was more pronounced at the control site (13 % and 75 % for rhamnose and 46 % and 53 % for glucose for A. marina and R. stylosa, respectively) compared to the urban site. The study also exposed molecular tendencies during mangrove leaf litter degradation. The content of ferulic acid in the leaf litter decreased at all stands after 72 days of degradation (between −25 % and −58 %), while total syringyl phenols increased (between + 64 % and + 232 %). This research exposed the global implications of urban runoff, indicating accelerated leaf litter degradation in mangrove forests, potentially disrupting C sequestration dynamics and threatening ecosystem services.

Influence of colourants on environmental degradation of plastic litter

Plastic degradation and the resultant production of microplastics has an important effect on the environment and fauna across the world. This paper shows that the colourant incorporated into plastic formulations has a significant effect on the stability of plastics. A static experimental exposure of differently coloured polypropylene bottle tops from the same manufacturer to a moderate climate over 3 years showed that black, white and silver plastics were almost unaffected whereas the specific blue, green and especially red pigments used in this study were significantly degraded. The second part of the study collected littered HDPE plastic containers from a remote South African beach and analysed their condition as a function of the given manufacturing date stamp. Most items were black or white and samples up to 45 years old were found with relatively little environmental degradation other than mild abrasion. It appears that carbon and titanium dioxide colourants protect the HDPE polymer from photolytic degradation. While anthraquinone, phthalocyanine and diketopyrrolopyrrole pigments were found to enable UV light to degrade the polymer leading to brittle plastics, promoting the formation of microplastics, it is likely that other pigments that do not strongly absorb in the UV will result in similar degradation.

Altered soil nitrogen retention by grassland acidification from near-neutral to acidic conditions: A plant-soil-microbe perspective

Grassland ecosystems are facing soil acidification, occurring either rapidly or gradually, alongside the persistent threats of acid deposition and nitrogen (N) pollution. However, the understanding of how grassland soils retain N in response to acidification remains limited, despite its critical importance in providing essential services in these ecosystems. Considering the prevalence of near-neutral or weak-acidic (e.g., pH 6) soils in grasslands worldwide, we aim to predict the pathways through which grassland acidification alters soil N retention. Firstly, as soil fungal proportions increase, the carbon:nitrogen ratios of the microbial community also rise, leading to a downregulation of microbial N uptake and retention. Secondly, grassland acidification weakens the stability of soil organic matter (SOM) by physically and chemically dissolving its components, but also conserves SOM by hindering biological mineralization, thereby enhancing N retention. Thirdly, acidification damages 2:1 clay minerals and causes occupation of exchangeable positions by H+, liberating fixed ammonium and subsequently attenuating grassland soil N retention. Fourthly, acidification leads to the breakup of macroaggregates, exposing SOM to microbial attack but also compromising microbial habitats and activity, resulting in uncertainty in grassland N retention. Fifthly, dominant plant stress-tolerators allocate more N aboveground as less decomposable defensive metabolites, reducing the risk of N loss during grassland litter degradation. Overall, in future research, it is crucial to focus on anticipating the changes in soil N retention under acidification, highlighting the synergistic or antagonistic interactions among the reviewed grassland modulators/processes, and quantifying the impacts of declined N deposition on grassland soil N retention and cycling, given the current and recent past stable or even declined atmospheric N deposition in many regions.

Fungal community structure shifts in litter degradation along forest succession induced by pine wilt disease

Fungi play a crucial role in decomposing litter and facilitating the energy flow between aboveground plants and underground soil in forest ecosystems. However, our understanding how the fungal community involved in litter decomposition responds during forest succession, particularly in disease-driven succession, is still limited. This study investigated the activity of degrading enzyme, fungal community, and predicted function in litter after one year of decomposition in different types of forests during a forest succession gradient from coniferous to deciduous forest, induced by pine wilt disease. The results showed that the weight loss of needles/leaves and twigs did not change along the succession process, but twigs degraded faster than needles/leaves in both pure pine forest and mixed forest. In pure pine forest, peak activities of enzymes involved in carbon degradation (β-cellobiosidase, β-glucosidase, β-D-glucuronidase, β-xylosidase), nitrogen degradation (N-acetyl-glucosamidase), and organic phosphorus degradation (phosphatase) were observed in needles, which subsequently declined. The fungal diversity and evenness (Shannon’s diversity and Shannon's evenness) dropped in twig from coniferous forest to mixed forest during the succession. The dominant phyla in needle/leaf and twig litters were Ascomycota (46.9%) and Basidiomycota (38.9%), with Lambertella pruni and Chalara hughesii identified as the most abundant indicator species. Gymnopus and Desmazierella showed positively correlations with most measured enzyme activities. Functionally, saprotrophs constituted the main trophic mode (47.65%), followed by Pathotroph-Saprotroph-Symbiotroph (30.95%) and Saprotroph-Symbiotroph (10.57%). The fungal community and predicted functional structures in both litter types shifted among different forest types along the succession. These findings indicate that the fungal community in litter decomposition responds differently to disease-induced succession, leading to significant shifts in both the fungal community structure and function.

Functional redundancy across space and time in litter‐degrading fungal communities

AbstractIntroductionMicrobial‐driven litter decomposition contributes significantly to global carbon (C) turnover. Fungi play central roles in the degradation process due to their ability to hydrolyse recalcitrant litter components. The spatiotemporal variations in taxonomic composition of litter‐degrading fungi have been well documented. However, associated variations in litter‐degradation‐related functional composition of fungal communities remain unexplored.Materials and MethodsIn this study, a 16‐week field‐based buried rice straw experiment was conducted at three experimental sites across subtropical China in combination with laboratory 13C‐straw‐based DNA stable‐isotope probing (DNA‐SIP) microcosm experiments. Amplicon sequencing combined with shotgun metagenomic sequencing were the approaches of choice.ResultsThe field experiment showed that the taxonomic composition of the straw‐degrading fungal community was highly variable while the functional composition was rather stable. The higher permutational multivariate analysis of variation F scores (20.904−48.660) and the steeper slopes (1.92 E‐04−4.15E‐04) of the distance decay relationship for taxonomic composition than for function across periods (with lower F scores = 7.047−21.601 and gradual slopes = −1.33 E‐05 to −1.03E‐04) both indicated that the spatiotemporal patterns of functional composition in litter‐degrading fungi community were more conserved. The laboratory DNA‐SIP confirmed the field observations and showed that the conserved functional composition in litter‐degrading fungi was underpinned by a high functional redundancy of Basidiomycota.ConclusionFunction and taxonomy of litter‐degrading fungi were decoupled. The functional composition of the litter‐degrading fungal community was highly conserved in space and time, the taxonomic composition less so. The main drivers behind the observed taxonomic decoupling are probably/most likely functional redundancy and metabolic niche selection resulting in conservation of function, with changing environmental conditions and dispersal limitation drove the observed high taxonomic turnover of the community over the course of the litter degradation progression. Our study provides valuable insights in the ecology of fungi and their roles in in global C sequestration for ecosystem sustainable development.

Functional Diversity Accelerates the Decomposition of Litter Recalcitrant Carbon but Reduces the Decomposition of Labile Carbon in Subtropical Forests

The biodiversity of litter can regulate carbon and nutrient cycling during mixed decomposition. It is common knowledge that the decomposition rates of mixed litters frequently deviate from those predicted for these component litter species. However, the direction and magnitude of the nonadditive effects on the degradation of mixed litters remain difficult to predict. Previous studies have reported that the different carbon fractions of leaf litters responded to litter mixture differently, which may help to explain the ambiguous nonadditive effect of diversity on bulk litter decomposition. Therefore, we conducted decomposition experiments on 32 litter mixtures from seven common tree species to test the responses of different carbon fractions to litter diversity in subtropical forests. We found that the overall mass loss of the mixed litter was faster than that estimated from single species. The relative mixing effects (RMEs) of different carbon fractions exhibited different patterns to litter diversity and were driven by different aspects of litter functional dissimilarity. Soluble carbon fractions decomposed more slowly than expected from single species, while lignin fractions decayed more quickly. Moreover, we found that the RMEs of bulk litter decomposition may be determined by the lignin fraction decomposition. Our findings further support that distinguishing the response of different carbon fractions to litter diversity is important for elucidating the nonadditive effects of total litter decomposition.

Exogenous enzyme addition affects litter decomposition by altering the microbial community and litter nutrient content in planted forest

Abstract Litter inputs have great impacts on the soil properties and ecosystem functioning in forests. Rapid litter decomposition leads to decreases in planted forest agricultural waste and enhances the nutrient cycle in forests. The breakdown of litter and the release of various components depend heavily on enzymes. However, the effects of exogenous enzyme preparations on litter decomposition have been hardly investigated. In this study, we examined how these enzymes affected the remaining rate of litter quality, nutrient content (C, N, K), and microbial community diversity. Taking Eriobotrya japonica litter as the research object, five exogenous enzymes (laccase, lignin peroxidase, leucine arylamidase, cellulase, and acid phosphatase) were applied to litter leaves. The mass remaining rate and main nutrient content of the litter were measured during the decomposition period. The microbial diversity attached to the surface of the litter was determined after decomposition at constant temperature and humidity for 189 days. Application of laccase and lignin peroxidase increased litter degradation by affecting microbial diversity, N and K contents. Addition of leucine arylamidase leaded to an increase in N content, and decreased the quality of the litter. The cellulose and lignin decomposition rate in litters was unaffected by the addition of cellulase, laccase, and lignin peroxidase. These results indicate that exogenous addition of enzymes may alter the nutrient content and microbial community, thus affecting litter decomposition. It is imperative to investigate the effects and mechanisms of exogenous enzymes on litter decomposition for regulating decomposition of agricultural waste litter.

Emissions and Potential of Global Warming of N2O Gas of Mangrove Litter Degradation on the West Muna Regency Coast

Comprehensive research was conducted in the mangrove ecosystem of West Muna Regency to investigate the absorption of greenhouse gas (GHG) and degradation of its litter-produced GHG emissions, including N2O and carbon. The ecosystem consisted of four stations, namely Mangrove Maginti (station I), Mangrove Tiworo Tengah (station II), Mangrove Tiworo Islands (station III), and Mangrove Sawerigadi (Station IV). The research aimed to determine emissions and global warming potential (GWP) of N2O gas resulting from the degradation of mangrove litter. The team used a syringe mounted on the hood to collect gas samples and gas chromatography for concentration analysis. The correlation of emissions to environmental variables was analyzed using the Pearson correlation method. The results showed that all species' most significant and smallest average emissions were at stations III and II, with values of 0.0019 mg/m2/hour and 0.0015 mg/m2/hour, respectively. Water temperature showed a weak relationship with N2O emissions, namely r = 0.3511 (p <0.05), while water salinity did not strongly correlate with N2O emissions (r=-0.4471; p<0.05). The average GWP value ranged from 0.3665–0.6314 CO2e mg/m2/hour. Species R. apiculata and B. cylindrica at stations III and II had the largest and smallest GWP values of 0.8392 and 0.1912 CO2e mg/m2/hour, respectively.

Changes in Bacterial Communities and Functions Associated with Litter Degradation During Forest Succession Caused by Forest Disease

Forest succession affects aboveground vegetation and belowground microbial community composition, in which litter degradation plays an important role in nutrient cycling. However, limited information is available on how microbial communities change during litter degradation in forests undergoing succession due to disease. In this study, the bacterial communities and functions in litter degradation during the forest succession from pure Pinus forest (PPF), mixed Pinus and Liquidambar forest (MPF and MLF), and pure Liquidambar forest (PLF) were investigated. The results showed that the bacterial community richness and diversity in both needles or leaves and branch litters increased progressively with forest succession. Proteobacteria, Actinobacteria, Bacteroidetes, and Acidobacteria were the most abundant bacterial phyla in the litter degradation during forest succession. The abundance of Bacteroidetes in branches increased significantly, while the abundance of genus Paraburkholderia decreased during forest succession. The different forests formed distinct bacterial community structures during litter decomposition. Functionally, chemoheterotrophy was the most abundant functional guild, followed by nitrogen fixation, intracellular parasitism, and urealysis. The abundance of nitrogen fixation decreased significantly during forest succession. Similarly, the different forests formed distinct bacterial functional structures in the needle or leaf during the succession. However, only two functional structures were formed in the branch. These results suggest that the bacterial community and its functions undergo significant changes during forest succession, particularly from the pure-pine to mixed-pine forest. These results provide a clear understanding of the changes in bacterial communities and functions during litter degradation in forests undergoing disease-induced succession.

Leaf litter chemistry and its effects on soil microorganisms in different ages of Zanthoxylum planispinum var. Dintanensis

BackgroundLeaf litter is the products of metabolism during the growth and development of plantation, and it is also an important component of nutrient cycling in plantation ecosystems. However, leaf litter chemistry and its effects on soil microorganisms in different ages, as well as the interactions between chemical components in leaf litter have been rarely reported. Based on this, this paper took Zanthoxylum planispinum var. dintanensis (hereafter Z. planispinum) plantations of 5–7, 10–12, 20–22, and 28–32 years old as the objects. By using one-way ANOVA, Pearson correlation analysis and redundancy analysis, we investigated leaf litter chemistry and its effects on soil microorganisms in different ages, and to reveal internal correlation of various chemical components in leaf litter, which can provide a scientific basis for the regulation of soil microbial activity in plantations.ResultsThe variation of organic carbon with plantation age was more stable compared to total nitrogen and phosphorus of leaf litter. Nitrogen resorption was stronger than phosphorus resorption efficiency in Z. planispinum, and resorption efficiencies of leaf nitrogen and phosphorus for different ages were lower than the global average. Total nitrogen was highly significantly positively correlated with lignin, and total potassium was significantly positively correlated with tannin, suggesting the increase of inorganic substances in leaf litter would promote the accumulation of secondary metabolites. The leaf litter chemical traits explained up to 72% of soil microorganisms, where lignin was positively correlated with fungi and negatively correlated with bacteria, indicating that fungi are able to decompose lower quality litter and can break down complex and stable organic compounds more rapidly than bacteria. The nutrient elements carbon and nitrogen in the leaf litter and their interrelationship also have a great impact on soil microorganisms, because carbon is not only the element that provides energy, but also the element with the largest content in the microbiota.ConclusionsThe sustained increase in inorganic nutrients of leaf litter did not favor the decomposition of secondary metabolites, but rather inhibited the degradation of leaf litter. The significant positive effect of the leaf litter chemistry on soil microorganisms indicates the important role of leaf litter in promoting nutrient cycling in Z. planispinum plantations.

Solar radiation explains litter degradation along alpine elevation gradients better than other climatic or edaphic parameters.

Organic matter (OM) decomposition has been shown to vary across ecosystems, suggesting that variation in local ecological conditions influences this process. A better understanding of the ecological factors driving OM decomposition rates will allow to better predict the effect of ecosystem changes on the carbon cycle. While temperature and humidity have been put forward as the main drivers of OM decomposition, the concomitant role of other ecosystem properties, such as soil physicochemical properties, and local microbial communities, remains to be investigated within large-scale ecological gradients. To address this gap, we measured the decomposition of a standardized OM source - green tea and rooibos tea - across 24 sites spread within a full factorial design including elevation and exposition, and across two distinct bioclimatic regions in the Swiss Alps. By analyzing OM decomposition via 19 climatic, edaphic or soil microbial activity-related variables, which strongly varied across sites, we identified solar radiation as the primary source of variation of both green and rooibos teabags decomposition rate. This study thus highlights that while most variables, such as temperature or humidity, as well as soil microbial activity, do impact decomposition process, in combination with the measured pedo-climatic niche, solar radiation, very likely by means of indirect effects, best captures variation in OM degradation. For instance, high solar radiation might favor photodegradation, in turn speeding up the decomposition activity of the local microbial communities. Future work should thus disentangle the synergistic effects of the unique local microbial community and solar radiation on OM decomposition across different habitats.

Biocatalytic potential of Pseudolycoriella CAZymes (Sciaroidea, Diptera) in degrading plant and fungal cell wall polysaccharides

Soil biota has a crucial impact on soil ecology, global climate changes, and effective crop management and studying the diverse ecological roles of dipteran larvae deepens the understanding of soil food webs. A multi-omics study of Pseudolycoriella hygida comb. nov. (Diptera: Sciaroidea: Sciaridae) aimed to characterize carbohydrate-active enzymes (CAZymes) for litter degradation in this species. Manual curation of 17,881 predicted proteins in the Psl. hygida genome identified 137 secreted CAZymes, of which 33 are present in the saliva proteome, and broadly confirmed by saliva CAZyme catalytic profiling against plant cell wallpolysaccharides and pNP-glycosyl substrates. Comparisons with two other sciarid species and the outgroup Lucilia cuprina (Diptera: Calliphoridae) identified 42 CAZyme families defining a sciarid CAZyme profile. The litter-degrading potential of sciarids corroborates their significant role as decomposers, yields insights to the evolution of insect feeding habits, and highlights the importance of insects as a source of biotechnologically relevant enzymes.

Multispecies assemblages and multiple stressors: Synthesizing the state of experimental research in freshwaters

AbstractRecent decades have witnessed a sharp biodiversity decline in freshwaters due to multiple stressors. The presence of multiple stressors is expected to affect community structure and interactions in freshwater ecosystems, with subsequent functional consequences. We synthesized the state of experimental, manipulative multiple‐stressor studies that focused on multispecies assemblages in freshwaters. Compared to rivers and lakes, wetland and groundwater ecosystems have received much less attention in identified multiple‐stressor research. Most of the identified studies investigated combinations of abiotic stressors (e.g., nutrients, pesticides, heavy metals, warming, altered flow and sedimentation) on microbes and invertebrates while biotic stressors and vertebrates have been largely overlooked. The responses of community structure (e.g., alpha diversity, biomass, and abundance), some community/ecosystem functions (e.g., photosynthesis and autotrophic activity, leaf litter degradation), and morphological traits like body size and growth forms were frequently investigated. We observed a clear gap in biotic interactions under multiple‐stressor conditions, which, although difficult to study, could impede a deeper mechanistic understanding of how multiple stressors affect freshwater assemblages and associated ecological processes. Although information on ecosystem recovery pathways following restoration is critical for freshwater management, few studies were designed to provide such information, signifying the disconnections between multiple‐stressor research and environmental practice. To bridge these gaps, researchers and environmental practitioners need to work together to identify key stressors and interactions at different spatial and temporal scales and prioritize stressor management. Such collaborations will enhance the translation of multiple‐stressor research into efficient management strategies to protect and restore freshwater ecosystems.This article is categorized under: Water and Life > Stresses and Pressures on Ecosystems Water and Life > Conservation, Management, and Awareness