Daucus Carota Research Articles

Isolation, Characterization and Docking Analysis of Lycopene from Solanum lycopersicum and Daucus carota

Tomato (Solanum lycopersicum) is a berry type fruits and red carrot (Daucus carota) is a root vegetable which have essential micronutrient for the human diet. Carotenoids, polyphenols and vitamins present in tomato and red carrot act as antioxidants, anticarcinogens, and well known to promote human health and is considered as a vital functional food. Lycopene is a main carotenoid in tomatoes and red carrot, accountable for the red color of tomatoes and carrot. Lycopene can trap singlet oxygen and reduce mutagenesis. Lycopene reveals important role in a number of chronic diseases such as cancer. The present study was aimed to characterize, compare and evaluate the lycopene content in tomatoes and carrots and determine, red carrots can be an alternative source of lycopene because fresh tomatoes have a shorter shelf life than carrot. The molecular docking is presented between lycopene and Human homooxygenase enzyme-1 (HO-1) that potentiate it as a suitable antioxidant molecule.

Using of Somatic Embryogenesis for Improving Bolting-resistant New Local Cultivars of Heirloom Carrot Cultivars (Daucus carota) Under Egyptian Conditions

Foreign carrot varieties with desirable morphological traits for the local and global markets must bloom in low temperatures for a long period of time in Egypt, but these climatic conditions are not available for flowering and seed production for these varieties, so it is common to import carrot seeds from abroad. On the other hand, Local cultivars bloom earlier when planted later than the advised date. Due to the heat, it cannot be grown throughout the summer. Pushing the somatic cells to divide and create a new polarity is necessary for the induction of tissues in the lab and the creation of somatic embryos. It was shown that several auxins play a crucial role in the development of these embryos, particularly 2, 4-D (2,4-dichlorophenoxyacetic acid). This experiment was carried out to investigate the effect of five procedures in a tissue culture laboratory using two concentrations of 2, 4-D at a concentration of 2.5 and 5 mg/l for indirect somatic embryos induction from sexual embryos produced from culturing carrot (Daucus carota) seeds of Carrot cv. Kuroda (an heirloom variety). The results confirmed by scanning electron microscopy showed that it is crucial to compare the various processes used to create somatic Embryogenesis to assess their effectiveness. The four stages of somatic embryos, globular, heart, torpedo, and cotyledon form, were observed on the formed callus. The highest amounts of callus fresh weight, the number of globular-shaped stage embryos, the number of heart-shaped stage embryos, the number of torpedo-shaped stage embryos, the number of cotyledon-shaped stage embryos, and the number of seedlings had been recorded in the media supplemented with 2, 4-D at a concentration of 5 mg. This study was able to produce somatic embryos of the foreign carrot cv. Kuroda, Plants obtained from somatic embryos are included in selection programs to produce varieties resistant to early flowering under Egyptian conditions. These results constitute a step in the way in the field of improving bolting-resistant new local cultivars of heirloom carrot cultivars (Daucus carota) under Egyptian conditions.

Chemoenzymatic reduction of double bonds from chalcones using Daucus carota roots

The chemoselective reduction of conjugated double bonds has been developed using Daucus carota roots in water. This is the first report on the chemoselective reduction of conjugated double bonds in the presence of other reducible functionalities such as nitro-, and cyano groups. This method is also compatible with halides and isolated double bonds, which do not survive under catalytic hydrogenation.

From soil to plant: strengthening carrot defenses against Meloidogyne incognita with vermicompost and arbuscular mycorrhizal fungi biofertilizers.

Sustainable agricultural practices for controlling crop pests are urgently needed to reduce the reliance on chemical pesticides, which have long-term detrimental effects on ecosystems. In this study, we assessed the effectiveness of arbuscular mycorrhizal fungi (AMF) and vermicompost (Vc) supplementation, alone and in combination, in mitigating the negative impacts of Meloidogyne incognita infestation on carrot (Daucus carota L.) growth, development, and physiology. We measured different plant growth parameters such as plant height and biomass accumulation, several plant physiological parameters such as the levels of photosynthetic pigments, phenolics, and the activity of defense enzymes such as peroxidases and polyphenol oxidases, and evaluated the severity of Meloidogyne incognita nematode infestation on plants treated or not treated with vermicompost (Vc) and/or arbuscular mycorrhizal fungi (AMF). Our findings show that M. incognita significantly affects plant growth, biomass accumulation, and photosynthetic pigment and carotenoid content. The incorporation of Vc and AMF into the soil, either individually or in combination, significantly alleviates the negative effects of nematode infestation on carrot plants. This was accompanied by the induction of phenolic compounds and defense enzymes such as peroxidases (+15.65%) and polyphenol oxidases (29.78%), and by a reduction in the severity of nematode infestation on Vc and AMF-treated plants compared to nematode-infested plants. Principal component analysis (PCA) shows significant correlations between various of the studied parameters. In particular, we observed negative correlations between the application of AMF and Vc alone and in combination and disease severity, and positive correlations between plant growth, photosynthetic pigments phenol content, and activity of defense enzymes. Our study highlights the relevance of cultural practices and beneficial microorganisms for the sustainable and environmentally friendly management of agricultural pests.

Nesting biology and phylogenetic relationships of the parasitoid-hunting wasp Lindenius pygmaeus armatus (Vander Linden, 1829) (Hymenoptera: Crabronidae)

Nests of Lindenius pygmaeus armatus were examined in northern Poland in Kowalewo Pomorskie and Sierakowo. Adults were encountered from late May to late July. The nests were built in sandy areas and wasteland. Seven nests were observed, of which two were dug up and their structure was examined. The channel was approximately 2.5 mm in diameter and 8–10 cm in the length. The material removed during digging was placed near the nest entrance. The main burrow led to 3–5 cells. The cocoons were approximately 5–7 mm long and 2.5–3.5 mm wide. Females of L. p. armatus provided their nest cells with chalcid wasps averaging 14 prey items per cell. Parasitoids Myrmosa atra and kleptoparasites Senotainia conica were observed entering the burrows. Both females and males of L. p. armatus were detected on the flowers of Achillea millefolium, Peucedanum oreoselinum, Daucus carota, and Tanacetum vulgare. The article also includes phylogenetic relationships of Western Palearctic Lindenius species.

The heritability of tolerance to pathogenic fungi <i>Alternaria dauci</i> and <i>Fusarium oxysporum</i> by carrot hybrids

Relevance. Alternaria dauci, Alternaria radicina and Fusarium oxysporumare wide spread and harmful fungal diseases of carrot (Daucus carota L.) in the Russian Federation and in the world. Total losses of roots from these diseases are 35-70%. Obtaining of new varieties and hybrids resistant to these pathogens is complicated by the fact of polygenic control resistance traits to fungal diseases of Alternaria and Fusarium genus. Interaction of polygenic resistance traits with environmental factors causes the soft character of changing these traits: effects of interactions between alleles and genes are changed, the dominant effect become weaker, additive effect become stronger. So, we can say about of the tolerance to complex pathogens for that case.The goal of our study is to determine the heritability of tolerance to fungal pathogens Alternaria dauci and Fusarium oxysporum by hybrids F1 of carrot.Materials and methods. Materials of studies were 7 basic lines with different types of roots; 7 prospective hybrids F1 and mycelium of Alternaria dauci and Fusarium oxysporum with spores (for inoculation). Methods of studies were: evaluation resistance of lines and hybrids F1 (seedlings, adult plants and roots) at different types of infection backgrounds; dispersion and correlation analysis. Resistance the basic lines of carrot to fungi of Alternaria and Fusarium genus was evaluated step-by-step, using several types of artificial and natural infection backhybrids F1. Tolerant samples were selected and they were used in crossings. F1 – hybrids have been obtained and they have been evaluated at artificial and natural backgrounds.Results: 1. One tolerant male form № 1268 and 6 female forms with weak sensitivity to fungi of Alternaria and Fusarium genus were selected from basic material. They were used in crossings. hybrids F1 have been obtained. 2. Analysis the heritability of carrot resistance to fungal pathogens Alternaria dauci and Fusarium oxysporum identified, that such type of resistance inherited by father’s type. 3. Using tolerant carrot line № 1268 in crossings as the male form and 6 female forms with weak sensitivity to fungal pathogens Alternaria dauci and Fusarium oxysporum increased significantly the percent of tolerant plant in 3 F1 – hybrid population under artificial infection on provocative infection background.

Comparison of genotypic and phenotypic selection of breeding parents in a carrot (Daucus carota) germplasm collection

AbstractIn this study, we developed and evaluated genomic prediction strategies to identify valuable breeding material in crop germplasm collections, using ongoing efforts to breed carrot varieties with tall canopies and mild flavor as a model vegetable crop and breeding goal. Genomic prediction leverages high‐density genotype data to predict phenotypes or breeding values, potentially allowing for rapid identification of useful germplasm in a genotyped collection. Two different training populations were designed to approximate different potential breeding contexts in which genomic prediction could be applied. The genomic selection models developed using these phenotyped training populations had low‐to‐moderate (0.11–0.31) ability to predict the trait values of germplasm accessions evaluated in a separate environment, depending on the trait. Selected accessions were used as parents in crosses with two different elite inbred lines to initiate new breeding populations. In the target environment, these populations were evaluated for canopy height and flavor and compared to populations developed from phenotypically selected parents. At the F2 stage, there were few differences between populations developed with genomic and phenotypic selection. While evaluation of future generations is required, these results suggest that genomic selection may allow for the identification of valuable germplasm accessions without the need for extensive field evaluation of potential parents.

A rapid recovery of phytochemicals from carrot seeds: an analytical approach

In the present study, Microwave-assisted extraction (MAE) and Soxhlet-extraction (SE) were compared for the extraction of phytochemicals from the seed powder of Daucus carota. Results showed that only 5 min of MAE gave maximum phenolics 275 mg and flavonoids 229 mg as compared to SE, which took 5 h to give its maximum. GC-MS analysis of MAE and SE revealed 15 and 11 compounds respectively; Estragole (52.55%) and linalool (39.97%) being the major component in MAE and SE-derived extract respectively. HPLC analysis showed a variety of phenolics and flavonoids in MAE as compared to SE. MAE extracts showed significantly higher antioxidant (82%) and antifungal potential (89.3%inhibition) compared to SE (54.32% and 60.7% respectively). Results suggested that MAE can rapidly extract phytochemicals from carrot seeds without affecting their biological activities. The usage of MAE in analytical labs can safely opt for rapid extraction of required phytochemicals by optimizing the parameters.

Effect of antioxidant and anti-inflammatory on bioactive components of carrot (Daucus carota L.) leaves from Jeju Island

The present study evaluated the potential of carrot (Daucus carota L.) leaf, a non-edible part of carrots, which are among the most consumed vegetables worldwide. The antioxidant activities of 70% ethanol extract (EEC) and hot water extract (HEC) of carrot leaves were compared. The results revealed that the total polyphenol content, total flavonoid content, and DPPH and ABTS radical scavenging activities were higher in EEC than in HEC. Both extracts protected the cells against H2O2-induced toxicity and markedly reduced the levels of reactive oxygen species in RAW 264.7 cells. Moreover, pretreatment of RAW 264.7 cells with EEC and HEC prior to H2O2 (500 μM) exposure increased superoxide dismutase and glutathione peroxidase activities in these cells. Notably, EEC and HEC increased intracellular catalase activity by 36.77 and 6.39 times, respectively. Compared to HEC, EEC remarkably inhibited the production of lipopolysaccharide-induced nitric oxide and reduced the gene expression of IL-6, IL-1β, iNOS, COX-2, and TNF-α. Comparative analysis of the composition of the extracts using HPLC–UV suggested notably higher contents of catechin, chlorogenic acid, caffeic acid, rutin, quercetin, and cynaroside in EEC than in HEC. Collectively, these results imply that carrot leaves are a potentially beneficial natural source of antioxidants and anti-inflammatory compounds in functional foods.

The effect of solid matrix priming with biostimulants on seed germination and seedling quality of carrot (Daucus carota L.) under abiotic stress conditions

The effect of solid matrix priming with biostimulants on seed germination and seedling quality of carrot (Daucus carota L.) under abiotic stress conditions

Synthesis of betanin by expression of the core betalain biosynthetic pathway in carrot

Betalain has received increased attention because of its high nutritional value and crucial physiological functions. Based on the elucidation of its core biosynthetic pathway, betalain can be produced in additional plants by metabolic engineering. Synthesis of betalain in carrot (Daucus carota L.) can improve its nutritional quality and economic value by extracting betalain from the fleshy root, non-edible part, and processing residue of carrot. In this study, two different constructs, namely, pYB:mCD (AomelOS, BvCYP76AD1S, and BvDODA1S) and pYB:CDD (BvCYP76AD1S, BvDODA1S, and MjcDOPA5GTS), were introduced into carrot for betanin synthesis by Agrobacterium-mediated transformation. Betanin can be synthetized in both transgenic calli, and pYB:mCD-transgenic callus can be used to produce betacyanin by suspension culture. However, pYB:mCD-transgenic seedlings can synthetize betanin only by tyrosine feeding. The pYB:CDD-transgenic lines can synthetize betanin in whole plants. The betanin content in fleshy root of pYB:CDD-transgenic carrot was (63.4 ± 9) μg ·g−1 fresh weight according to quantitative analysis. These betanin-producing carrot plant materials can be used to synthesize betanin for industrial application or consumption as dietary sources.

Efficiency of the Enzymatic Conversion of Flavone Glycosides Isolated from Carrot Leaves and Anti-Inflammatory Effects of Enzyme-Treated Carrot Leaves.

In traditional oriental medicine, carrots (Daucus carota L.) are considered effective medicinal herbs; however, the use of D. carota leaves (DCL) as therapeutic agents has not been explored in depth. Therefore, we aimed to demonstrate the value of DCL, generally treated as waste while developing plants for wide industrial availability. Six flavone glycosides were isolated and identified from DCL, and their constituents were identified and quantitated using an NMR and HPLC/UV method, which was optimized and validated. The structure of chrysoeriol-7-rutinoside from DCL was elucidated for the first time. The method exhibited adequate relative standard deviation (<1.89%) and recovery (94.89-105.97%). The deglycosylation of DCL flavone glycosides by Viscozyme L and Pectinex was assessed. Upon converting the reaction contents to percentages, the luteolin, apigenin, and chrysoeriol groups showed values of 85.8, 33.1, and 88.7%, respectively. The enzyme-treated DCL had a higher inhibitory effect on TNF-α and IL-2 expression than that of the carrot roots or carrot leaves without enzyme treatments. These results highlight the importance of carrot leaves and could be used as baseline standardization data for commercial development.

Biological treatment of leachate from the uncontrolled landfill: evaluation of toxicity and heavy metals reduction

ABSTRACT This work assesses the efficiency of biological processes in reducing leachate toxicity, using tests of phytotoxicity, cytotoxicity and heavy metals assay. Concerning metal load of raw leachate, iron is the most abundant with a value of 77.23 mg/L; combined treatment is most effective in reducing metals with abatement rates of: Al (94.96%), Fe (99.23%), Pb (90.53%), Sn (90.25%) and Zn (90.43%). The phytotoxicity of raw leachate is total against all tested seeds, this phytotoxicity was decreased after treatment with SBR, and the germination indices are between 3.60%−65.36%, 0.25%−39.99% and 5.36%−35.55% respectively for Daucus carota, Lactuca sativa and Hordeum vulgare seeds. Leachate treated with the combined treatment exhibits no inhibition of germination even at concentrations of 100%. Regarding cytotoxicity assessed via Brine Shrimp test, raw leachates were cytotoxic killing all Artemia salina larvae even at low concentration of 1%. After the treatments, cytotoxicity of leachate was decreased especially in leachate treated by SBR and combination with inhibition percentages up to 16.66%. The experimental results obtained were confirmed using PCA which showed that the SBR and combination treatments have common purification characteristics and also the inverse correlation between heavy metal concentrations and germination indices indicate that these metals are involved in leachate toxicity.

UPLC-QTOF/MS-assisted chemical profiling of Daucus carota leaf extract and evaluation of its antioxidant, antimicrobial and antibiofilm activities: Evidence from in vitro and in silico studies

UPLC-QTOF/MS-assisted chemical profiling of Daucus carota leaf extract and evaluation of its antioxidant, antimicrobial and antibiofilm activities: Evidence from in vitro and in silico studies

Lycopene ε-cyclase mediated transition of α-carotene and β-carotene metabolic flow in carrot fleshy root.

The accumulation of carotenoids, such as xanthophylls, lycopene, and carotenes, is responsible for the color of carrot (Daucus carota subsp. sativus) fleshy roots. The potential role of DcLCYE, encoding a lycopene ε-cyclase associated with carrot root color, was investigated using cultivars with orange and red roots. The expression of DcLCYE in red carrot varieties was significantly lower than that in orange carrots at the mature stage. Furthermore, red carrots accumulated larger amounts of lycopene and lower levels of α-carotene. Sequence comparison and prokaryotic expression analysis revealed that amino acid differences in red carrots did not affect the cyclization function of DcLCYE. Analysis of the catalytic activity of DcLCYE revealed that it mainly formed ε-carotene, while a side activity on α-carotene and γ-carotene was also observed. Comparative analysis of the promoter region sequences indicated that differences in the promoter region may affect the transcription of DcLCYE. DcLCYE was overexpressed in the red carrot 'Benhongjinshi' under the control of the CaMV35S promoter. Lycopene in transgenic carrot roots was cyclized, resulting in the accumulation of higher levels of α-carotene and xanthophylls, while the β-carotene content was significantly decreased. The expression levels of other genes in the carotenoid pathway were simultaneously upregulated. Knockout of DcLCYE in the orange carrot 'Kurodagosun' by CRISPR/Cas9 technology resulted in a decrease in the α-carotene and xanthophyll contents. The relative expression levels of DcPSY1, DcPSY2, and DcCHXE were sharply increased in DcLCYE knockout mutants. The results of this study provide insights into the function of DcLCYE in carrots, which could serve as a basis for creating colorful carrot germplasms.

Feed Modification Using Carrot Flour to Improve Growth and Brightness Koi Fish Color

Color is vital in determining the quality of koi fish (Cyprinus carpio L.) and is even seen as an important component in selecting ornamental fish. Therefore, alternative feed sources are needed, which are highly nutritious and increase the brightness of fish. This study aimed to determine the effect of adding carrot flour (Daucus carota L.) and the concentration that had a good impact on increasing the color of Koi fish (Cyprinus carpio L.). This study used six treatments where treatment A was fed containing Spirulina as a control. Treatment B was the addition of carrot flour with a concentration of 5%, C with a concentration of 10%, D with a concentration of 15%, E with a concentration of 20%, and F with a concentration of 25%. The results showed that adding carrot flour affected the brightness of the color of the fish. The best color improvement is found in treatment F, with a value of 6.

Telomere-to-telomere carrot (Daucus carota) genome assembly reveals carotenoid characteristics.

Carrot (Daucus carota) is an Apiaceae plant with multi-colored fleshy roots that provides a model system for carotenoid research. In this study, we assembled a 430.40Mb high-quality gapless genome to the telomere-to-telomere (T2T) level of "Kurodagosun" carrot. In total, 36 268 genes were identified and 34 961 of them were functionally annotated. The proportion of repeat sequences in the genome was 55.3%, mainly long terminal repeats. Depending on the coverage of the repeats, 14 telomeres and 9 centromeric regions on the chromosomes were predicted. A phylogenetic analysis showed that carrots evolved early in the family Apiaceae. Based on the T2T genome, we reconstructed the carotenoid metabolic pathway and identified the structural genes that regulate carotenoid biosynthesis. Among the 65 genes that were screened, 9 were newly identified. Additionally, some gene sequences overlapped with transposons, suggesting replication and functional differentiation of carotenoid-related genes during carrot evolution. Given that some gene copies were barely expressed during development, they might be functionally redundant. Comparison of 24 cytochrome P450 genes associated with carotenoid biosynthesis revealed the tandem or proximal duplication resulting in expansion of CYP gene family. These results provided molecular information for carrot carotenoid accumulation and contributed to a new genetic resource.

Optimizing Organic Carrot (Daucus carota var. sativus) Yield and Quality Using Fish Emulsions, Cyanobacterial Fertilizer, and Seaweed Extracts

Liquid fertilizers are often used in the middle of the growing season in an attempt to enhance organic carrot (Daucus carota var. sativus) yield and quality, although their effect on plant performance is unproven. The impact of liquid organic fertilizers and foliar seaweed applications on carrot yield and quality characteristics were evaluated on certified organic land at the Colorado State University Horticulture Field Research Center in Fort Collins, CO, USA, in 2014 and 2015. Hydrolyzed and non-hydrolyzed fish fertilizer and cyanobacterial fertilizer (cyano-fertilizer) treatments were applied through a drip irrigation system at prescribed N rates about every 10 days throughout the growing season. Each treatment, including the unfertilized control, was repeated with the addition of concentrated organic seaweed extract, containing phytohormones, applied foliarly at the manufacturer’s recommended rates. The cyano-fertilizer treatment resulted in longer carrots in 2014 and the highest carrot yield in both years, with it consistently yielding equal to or greater than either hydrolyzed or non-hydrolyzed fish fertilizer. The foliar seaweed applications had no effect on carrot yield in either year. The cyano-fertilizer performed comparably to the other fertilizers, suggesting that cyano-fertilizer could be a viable alternative to organic liquid fish fertilizers.

The Carrot Phytoene Synthase 2 (DcPSY2) Promotes Salt Stress Tolerance through a Positive Regulation of Abscisic Acid and Abiotic-Related Genes in Nicotiana tabacum.

Background: Carotenoids, which are secondary metabolites derived from isoprenoids, play a crucial role in photo-protection and photosynthesis, and act as precursors for abscisic acid, a hormone that plays a significant role in plant abiotic stress responses. The biosynthesis of carotenoids in higher plants initiates with the production of phytoene from two geranylgeranyl pyrophosphate molecules. Phytoene synthase (PSY), an essential catalytic enzyme in the process, regulates this crucial step in the pathway. In Daucus carota L. (carrot), two PSY genes (DcPSY1 and DcPSY2) have been identified but only DcPSY2 expression is induced by ABA. Here we show that the ectopic expression of DcPSY2 in Nicotiana tabacum L. (tobacco) produces in L3 and L6 a significant increase in total carotenoids and chlorophyll a, and a significant increment in phytoene in the T1L6 line. Tobacco transgenic T1L3 and T1L6 lines subjected to chronic NaCl stress showed an increase of between 2 and 3- and 6-fold in survival rate relative to control lines, which correlates directly with an increase in the expression of endogenous carotenogenic and abiotic-related genes, and with ABA levels. Conclusions: These results provide evidence of the functionality of DcPSY2 in conferring salt stress tolerance in transgenic tobacco T1L3 and T1L6 lines.

Survey of the Endophytic Bacteria Inhabiting Wild Daucus Seed Using 16S rRNA Gene Amplicon Sequencing.

We report a preliminary survey of the endophytic bacterial microbiota of seed from wild carrot (Daucus carota) using 16S rRNA gene amplicon sequencing. Actinobacteria, Bacteroidetes, Firmicutes, and Proteobacteria were the most abundant phyla detected, while Bacillus, Massilia, Paenibacillus, Pantoea, Pseudomonas, Rhizobium, Sphingomonas, and Xanthomonas were the most abundant genera.