Cyclopropane Ring Research Articles

Synthesis of 13β- and 13α-epimers of 3-hydroxy-17-hydroxymethylestra-1,3,5(10)-triene and considerations on their hormonal and antiproliferative potency

Starting from 3-methoxyestra-1,3,5(10),16-tetraene-17-carbaldehydes of natural (13β) and epimeric (13α) series, a series of isomeric 3-hydroxy-17-hydroxymethylestra-1,3,5(10)-trienes, including those containing 16α,17α-annulated cyclopropane and cyclohexane ring D’, were prepared using the Corey-Chaykovsky and Diels-Alder reactions followed by reduction-demethylation with diisobutylaluminum hydride and hydrogenation. Target compounds showed antiproliferative effects on MCF-7 breast cancer cells to varying degrees superior to that on MCF-10A cells, in low micromolar concentrations. The ERα-mediated luciferase reporter gene assay demonstrated that obtained steroids without an additional carbocycle or with a cyclopropane 16α,17α-annulated carbocycle are effective ERα activators. In this test, steroids of the natural configuration showed high activity at both 10 nM and 100 nM concentrations, whereas 13α-steroids showed a strong dose-dependent effect, surpassing their natural counterparts at a concentration of 100 nM. The 13β-steroid bearing additional 16α,17α-cyclohexane ring had low activity in the test. A simple docking approach using AutoDock Vina was used as a test for a preliminary assessment of the estrogenicity of the compounds. The scope of its applicability and limitations were shown using examples of synthesized molecules.

Stereoselective Hydroxyallylation of Cyclopropenes with Cyclopropanols via NHC Catalysis of Transient Organozinc Species

AbstractA stereoselective hydroxyallylation reaction of cyclopropenes with cyclopropanols is achieved under zinc‐mediated conditions, affording densely functionalized cyclopropanes with excellent diastereocontrol over three contiguous stereocenters within and outside the cyclopropane ring. A racemic variant of the reaction is synergistically promoted by catalytic N‐heterocyclic carbene (NHC) and organic base, whereas chiral amino alcohol‐derived bifunctional NHC enables a catalytic enantioselective variant. The reaction likely involves the generation of enolized zinc homoenolate via ring‐opening of zinc cyclopropoxide and enolization of the resulting homoenolate, followed by its addition to the cyclopropene as a prochiral allylzinc nucleophile. Our mechanistic investigations highlighted the transient nature of enolized homoenolate, which, once generated from thermodynamically predominant cyclopropoxide, immediately proceeds to allylzincation with cyclopropene. The NHC not only promotes the rate‐determining generation of enolized homoenolate but also engages in the allylzincation process. The resulting cyclopropylzinc species undergoes partial in situ protonation while partially remaining intact, thereby leaving an opportunity for trapping with an external electrophile.

Stereoselective Hydroxyallylation of Cyclopropenes with Cyclopropanols via NHC Catalysis of Transient Organozinc Species.

A stereoselective hydroxyallylation reaction of cyclopropenes with cyclopropanols is achieved under zinc-mediated conditions, affording densely functionalized cyclopropanes with excellent diastereocontrol over three contiguous stereocenters within and outside the cyclopropane ring. A racemic variant of the reaction is synergistically promoted by catalytic N-heterocyclic carbene (NHC) and organic base, whereas chiral amino alcohol-derived bifunctional NHC enables a catalytic enantioselective variant. The reaction likely involves the generation of enolized zinc homoenolate via ring-opening of zinc cyclopropoxide and enolization of the resulting homoenolate, followed by its addition to the cyclopropene as a prochiral allylzinc nucleophile. Our mechanistic investigations highlighted the transient nature of enolized homoenolate, which, once generated from thermodynamically predominant cyclopropoxide, immediately proceeds to allylzincation with cyclopropene. The NHC not only promotes the rate-determining generation of enolized homoenolate but also engages in the allylzincation process. The resulting cyclopropylzinc species undergoes partial in situ protonation while partially remaining intact, thereby leaving an opportunity for trapping with an external electrophile.

Ytterbium Triflate-Catalyzed Intramolecular Arylative Ring Opening of Arylaminomethyl-Substituted Donor-Acceptor Cyclopropanes: Access to Tetrahydroquinolines.

The treatment of arylaminomethyl-substituted donor-acceptor cyclopropanes with a catalytic amount of Yb(OTf)3 provides expedient access to tetrahydroquinoline derivatives. The transformation proceeds through an intramolecular SN2-type attack of the aminomethyl-containing aryl ring on the cyclopropane ring, leading to the formation of the products as single diastereomers.

Novel fragrant aldehydes from (1R,5R)-sabinene: An experimental study supported by DFT calculations revealing an unusual hydroformylation mechanism

The fragrance industry continually searches for compounds that introduce new scent notes or improve existing ones. Herein, we report a methodology for obtaining two novel aldehydes, potentially interesting for application in fragrance formulations, via rhodium-catalyzed hydroformylation of (1R,5R)-sabinene, a biorenewable monoterpene available in many essential oils. One of the aldehydes, which retained the original sabinene skeleton, was derived from the hydroformylation of the exocyclic C-C double bond through the accepted hydroformylation mechanism. The other aldehyde arose from the interaction of rhodium with the cyclopropane ring through an unusual mechanism, which resulted in the cyclopropane ring cleavage, forming a product that shares structural similarities with established fragrant molecules. The selectivity was controlled by adjusting the reaction conditions (temperature, pressure, P-ligand, and P/Rh ratio). Each aldehyde was obtained in a 70–80 % yield, depending on the reaction conditions. Combining our experimental findings with DFT calculations allowed us to propose an unusual hydroformylation reaction mechanism involving cyclopropane moiety in vinylcyclopropanes.

Microbial transformation of argentatins by Cunninghamella elegans

Microbial biotransformation of argentatin A (1), isoargentatin A (2) and argentatin B (3), the cycloartane- and lanostane-type triterpenoid constituents of guayule (Parthenium argentatum) resin, with Cunninghamella elegans ATCC 9245-A0 afforded eight new metabolites 4–11. These were identified as products formed as a result of: (i) α- and β-hydroxylation at C-7 and C-11; (ii) sequential oxidation of these newly formed alcohols to their corresponding carbonyl analogues; and (iii) rearrangement of the 9(10)-cyclopropane ring. The observed regiospecific hydroxylation reactions are possibly catalyzed by cytochrome P450 enzymes known to be produced by C. elegans. It is interesting that among the biotransformation products 9–11 of argentatin B (3) with a carbonyl group at C-11, only 11 had resulted from the rearrangement of the 9(10)-cyclopropane ring under the conditions used for biotransformation. This constitutes the first report of biotransformation of argentatins by C. elegans.

Biocatalytic Strategy for the Highly Stereoselective Synthesis of Fluorinated Cyclopropanes

AbstractFluorinated cyclopropanes are highly desired pharmacophores in drug discovery owing to the rigid nature of the cyclopropane ring and the beneficial effects of C−F bonds on the pharmacokinetic properties, cell permeability, and metabolic stability of drug molecules. Herein a biocatalytic strategy for the stereoselective synthesis of mono‐fluorinated and gem‐difluoro cyclopropanes is reported though the use of engineered myoglobin‐based catalysts. In particular, this system allows for a broad range of gem‐difluoro alkenes to be cyclopropanated in the presence of diazoacetonitrile with excellent diastereo and enantiocontrol (up to 99 : 1 d.r. and 99 % e.e.), thereby enabling a transformation not currently accessible with chemocatalytic methods. The synthetic utility of the present approach is further exemplified through the gram‐scale synthesis of a key gem‐difluorinated cyclopropane intermediate useful for the preparation of fluorinated bioactive molecules.

Biocatalytic Strategy for the Highly Stereoselective Synthesis of Fluorinated Cyclopropanes.

Fluorinated cyclopropanes are highly desired pharmacophores in drug discovery owing to the rigid nature of the cyclopropane ring and the beneficial effects of C-F bonds on the pharmacokinetic properties, cell permeability, and metabolic stability of drug molecules. Herein a biocatalytic strategy for the stereoselective synthesis of mono-fluorinated and gem-difluoro cyclopropanes is reported though the use of engineered myoglobin-based catalysts. In particular, this system allows for a broad range of gem-difluoro alkenes to be cyclopropanated in the presence of diazoacetonitrile with excellent diastereo and enantiocontrol (up to 99 : 1 d.r. and 99 % e.e.), thereby enabling a transformation not currently accessible with chemocatalytic methods. The synthetic utility of the present approach is further exemplified through the gram-scale synthesis of a key gem-difluorinated cyclopropane intermediate useful for the preparation of fluorinated bioactive molecules.

Biosynthesis of Strained Amino Acids by a PLP‐Dependent Enzyme through Cryptic Halogenation

AbstractAmino acids (AAs) are modular building blocks which nature uses to synthesize both macromolecules, such as proteins, and small molecule natural products, such as alkaloids and non‐ribosomal peptides. While the 20 main proteinogenic AAs display relatively limited side chain diversity, a wide range of non‐canonical amino acids (ncAAs) exist that are not used by the ribosome for protein synthesis, but contain a broad array of structural features and functional groups. In this communication, we report the discovery of the biosynthetic pathway for a new ncAA, pazamine, which contains a cyclopropane ring formed in two steps. In the first step, a chlorine is added onto the C4 position of lysine by a radical halogenase, PazA. The cyclopropane ring is then formed in the next step by a pyridoxal‐5′‐phosphate‐dependent enzyme, PazB, via an SN2‐like attack at C4 to eliminate chloride. Genetic studies of this pathway in the native host, Pseudomonas azotoformans, show that pazamine potentially inhibits ethylene biosynthesis in growing plants based on alterations in the root phenotype of Arabidopsis thaliana seedlings. We further show that PazB can be utilized to make an alternative cyclobutane‐containing AA. These discoveries may lead to advances in biocatalytic production of specialty chemicals and agricultural biotechnology.

Biosynthesis of Strained Amino Acids by a PLP-Dependent Enzyme through Cryptic Halogenation.

Amino acids (AAs) are modular building blocks which nature uses to synthesize both macromolecules, such as proteins, and small molecule natural products, such as alkaloids and non-ribosomal peptides. While the 20 main proteinogenic AAs display relatively limited side chain diversity, a wide range of non-canonical amino acids (ncAAs) exist that are not used by the ribosome for protein synthesis, but contain a broad array of structural features and functional groups. In this communication, we report the discovery of the biosynthetic pathway for a new ncAA, pazamine, which contains a cyclopropane ring formed in two steps. In the first step, a chlorine is added onto the C4 position of lysine by a radical halogenase, PazA. The cyclopropane ring is then formed in the next step by a pyridoxal-5'-phosphate-dependent enzyme, PazB, via an SN2-like attack at C4 to eliminate chloride. Genetic studies of this pathway in the native host, Pseudomonas azotoformans, show that pazamine potentially inhibits ethylene biosynthesis in growing plants based on alterations in the root phenotype of Arabidopsis thaliana seedlings. We further show that PazB can be utilized to make an alternative cyclobutane-containing AA. These discoveries may lead to advances in biocatalytic production of specialty chemicals and agricultural biotechnology.

Comprehensive Strategies for the Synthesis of 1,3-Enyne Derivatives

AbstractThe synthesis of 1,3-enyne has widespread appeal in organic synthesis due to their proven adaptability as intermediates in routes to compounds of significant biological and material interest. A variety of methods have been designed to formulate 1,3-enynes from diverse substrates, such as alkynes, 1,3-diynes, alkynyl-substituted cyclopropanes, and propargyl alcohols. This review covers the synthesis of 1,3-enynes utilizing the homo- and cross-coupling of alkynes, nucleophilic metal/acid-induced cyclopropane ring opening, and rearrangement/dehydration of propargyl alcohols. A key concern in procedures starting from alkynes and 1,3-diynes is the management of regio-, stereo-, and, where fitting, chemoselectivity. In contrast, in cyclopropyl ring opening nucleophile orientation determines the 1,3-enynes formed. Efficient methods for the broad and selective synthesis of 1,3-enynes are highlighted and specific examples are given to demonstrate the efficacy of these processes.1 Introduction and Scope2 Synthesis2.1 Synthesis of 1,3-Enynes from Alkynes2.1.1 Metal-Catalyzed Cross-Coupling/Additions of Alkynes with Alkenes or Vinyl or Aryl Halides2.1.1.1 Palladium Catalysis2.1.1.2 Rhodium Catalysis2.1.1.3 Copper Catalysis2.1.1.4 I ron Catalysis2.1.1.5 Nickel Catalysis2.1.1.6 Miscellaneous2.2 Synthesis of Enynes from Propargyl Alcohols2.3 Metal/Acid-Catalyzed Ring Opening of Cyclopropanes3 Conclusion

Enantioselective Synthesis of Organoborons Enabled by Cyclopropene Ring Opening

Enantioselective Synthesis of Organoborons Enabled by Cyclopropene Ring Opening

Seco-cyclic phorbol derivatives and their anti-HIV-1 activities

Phorbol esters are recognized for their dual role as anti-HIV-1 agents and as activators of protein kinase C (PKC). The efficacy of phorbol esters in binding with PKC is attributed to the presence of oxygen groups at positions C20, C3/C4, and C9 of phorbol. Concurrently, the lipids located at positions C12/C13 are essential for both the anti-HIV-1 activity and the formation of the PKC-ligand complex. The influence of the cyclopropane ring at positions C13 and C14 in phorbol derivatives on their anti-HIV-1 activity requires further exploration. This research entailed the hydrolysis of phorbol, producing seco-cyclic phorbol derivatives. The anti-HIV-1 efficacy of these derivatives was assessed, and the affinity constant (Kd) for PKC-δ protein of selected seco-cyclic phorbol derivatives was determined through isothermal titration calorimetry. The findings suggest that the chemical modification of cyclopropanols could affect both the anti-HIV-1 activity and the PKC binding affinity. Remarkably, compound S11, with an EC50 of 0.27 μmol·L-1 and a CC50 of 153.92 μmol·L-1, demonstrated a potent inhibitory effect on the intermediate products of HIV-1 reverse transcription (ssDNA and 2LTR), likely acting at the viral entry stage, yet showed no affinity for the PKC-δ protein. These results position compound S11 as a potential candidate for further preclinical investigation and for studies aimed at elucidating the pharmacological mechanism underlying its anti-HIV-1 activity.

Temperature Dependence of the Ring Opening of Cyclopropene Imines on Thorium Metallocenes.

The reactions of two highly strained cyclopropenimine ligands L1H and L2H (L1H = N1,N1,N2,N2-tetraisopropyl-3-iminocycloprop-1-ene-1,2-diamine, L2H = N1,N1,N2,N2-tetracyclohexyl-3-iminocycloprop-1-ene-1,2-diamine) with three thorium precursors Cp*2ThCl2, Cp*2Th(Cl)(CH3), and Cp*2Th(CH3)2 were studied. At -20 °C, L1H and L2H react with Cp*2ThCl2 to form Th1 (Th1 = Cp*2ThCl2(L1H)) and Th2 (Th2 = Cp*2ThCl2(L2H)), respectively, where the neutral ligand coordinates to the thorium metal center. Coordination of the ligand to the thorium metal center introduces aromaticity at the cyclopropene ring of the ligand. Reaction at room temperature results in the ring opening of the ligand to form Th3 (Th3 = Cp*2ThCl2((Z)-2,3-bis(diisopropylamino)acrylonitrile) and Th4 (Th4 = Cp*2ThCl2((Z)-2,3-bis(dicyclohexylamino)acrylonitrile), where the cyclopropenimine converts into a nitrile and coordinates to the thorium metal center. Reaction of L1H and L2H with Cp*2Th(Cl)(CH3) and/or Cp*2Th(CH3)2 at -20 °C results in a rapid methanolysis reaction and forms Cp*2Th(L1/L2)(CH3/Cl)-type complexes Th5 (Th5 = Cp*2Th(L1)(CH3)), Th6 (Th6 = Cp*2Th(L2)(CH3), Th7 (Th7 = Cp*2Th(L1)(Cl), and Th8 (Th8 = Cp*2Th(L2)(Cl). On the other hand, at room temperature, these reactions result in a ring opening of the ligand. Room-temperature reaction of L1H and L2H with Cp*2Th(CH3)2 results in Th9 (Th9 = Cp*2Th(CH3)((Z)-3-imino-N1,N1,N2,N2-tetraisopropylbut-1-ene-1,2-diamine) and Th10 (Th10 = Cp*2Th(CH3)((Z)-3-imino-N1,N1,N2,N2-tetracyclohexylbut-1-ene-1,2-diamine). Similarly, at room temperature, L1H and L2H react with Cp*2Th(Cl)(CH3) to form Th11 (Th11 = Cp*2Th(Cl)((Z)-3-imino- N1,N1,N2,N2-tetraisopropylbut-1-ene-1,2-diamine) and Th12 (Th12 = Cp*2Th(Cl)((Z)-3-imino-N1,N1,N2,N2-tetracyclohexylbut-1-ene-1,2-diamine). The ring-opening reaction is assisted by the nucleophilic attack of the thorium-coordinated methyl group to the highly strained cyclopropene imine carbon.

Fischer indolization of terpenes and steroids

AbstractHere we report a new synthetic approach to several intricate indoles and hydrazones starting with commercially available terpenes and steroids via Fischer indolization (FI) sequence under deep eutectic solvents (DES) conditions or by employing acetic acid reflux conditions. During the course of the reaction with pulegone 22 and pipertone 25 we observed Fischer indolization along with aromatization is occurring. In another instance, with thujone 32 we found cyclopropane ring is opening under thermal conditions leading to aromatized Fischer indole product. We also studied the FI sequence of some diketo derivatives to synthesize the corresponding bis indole derivatives, but instead we obtained mono hydrazone derivative which can be explained on the basis of steric reasons. In addition, we also modified other terpenes to study the FI sequence where we realized the formation of both hydrazone and indole derivatives. All the compounds synthesized here are well characterized by NMR and HRMS data.

Synthesis and pharmacological characterization of conformationally restricted 2-amino-Adipic acid analogs and carboxycyclopropyl glycines as selective metabotropic glutamate 2 receptor agonists

The metabotropic glutamate (Glu) receptors (mGluRs) are G-protein coupled receptors, which play a central role in modulating excitatory neurotransmission in the central nervous system (CNS). Thus, the development of tool compounds thereto, continues to interest the scientific community. In this study, we report the design and synthesis of new conformationally restricted 2-aminoadipic acid (2AA) 2–4, and glutamic acid 5, 6 analogs, which share the cyclopropane ring as the restrictor. The analogs were characterized at rat mGlu1−8 in an IP-One functional assay. While the 2AA analogs 3a, 4a and CCG-I analog 5a were shown to be selective mGlu2 agonists with low micromolar potencies, CCG-II analog 5b was shown to be a potent full agonist at mGlu2 (EC50 = 82 nM) with ∼15-fold selectivity over mGlu3, >25-fold selectivity over group III, and >60-fold selectivity over group I subtypes. An in silico study was performed to address this significant change (>3500 fold) in potency upon introduction of this methyl group (L-CCG-II vs 5b).

Cobalt-Catalyzed Stereoselective Synthesis of Chiral Gem-Difluorocyclopropanes with Vicinal Stereocenters

The introduction of fluorine atoms into a cyclopropane ring has been demonstrated to augment both biological activity and bioavailability. Chiral gem-difluorocyclopropanes, especially those incorporating vicinal stereocenters, are prevalent in the...

ГЕТЕРОЦИКЛИЧЕСКИЕ ТИОПРОИЗВОДНЫЕ КАМФЕНА С ФРАГМЕНТОМ ФЕНИЛТЕТРАЗОЛА

It is known that the tetrazole ring is an important pharmacophore fragment included in the structure of drugs with more than 20 types of biological activity. In order to obtain new biologically active thioterpenoids with heterocyclic fragments, we set the task of combining the natural terpene skeleton and the nitrogen-containing heterocyclic function through the biogenic sulfur atom. We have used thiylation and sulfenylchlorination of (+)-camphene and its derivatives, which are difficult to obtain synthetically (cyclopropene and allene), with 1-phenyltetrazole-5-thiol and 1-phenyltetrazole-5-sulfenyl chloride. Studying the structure of hetarene sulfide obtained by the reaction of camphene with 1-phenyltetrazole-5-thiol in the presence of a Lewis acid (boron trifluoride etherate), allowed us to conclude that during the reaction a Wagner-Meerwein rearrangement occurs. The rearrangement leads to isomerization of the initial camphane structure with the formation of a terpene sulfide of bornane structure with an exo-position of the sulfide group relative to the bicyclic skeleton of the molecule. In non-catalytic sulfenylchlorination reactions isomerization of the camphene skeleton is not observed. 2,2-Dimethylnorbornane-3-spirocyclopropene forms the product of the “normal” addition of 1-phenyltetrazole-5-sulphenyl chloride to the double bond of cyclopropene. A mixture of two regioisomers with a trans-position of the sulfide group and a chlorine atom is observed. In this case, the chlorine atom is located on the endo side of the cyclopropane ring relative to the gem-dimethyl group, while the sulfide group is on the exo side. Sulfenylchlorination of 2,2-dimethyl-3-ethenylidenenorbornane occurs regio- and stereospecifically at a sterically less hindered double bond, with the sulfide group located at the C-10 atom and the chlorine atom at the C-11 atom.

Lewis acid-catalyzed diastereoselective formal ene reaction of thioindolinones/thiolactams with bicyclobutanes.

Bicyclo[1.1.0]butanes (BCBs), featuring two fused cyclopropane rings, have found widespread application in organic synthesis. Their versatile reactivity towards radicals, nucleophiles, cations, and carbenes makes them suitable for various reactions, including ring-opening and annulation strategies. Despite this versatility, their potential as enophiles in an ene reaction remains underexplored. Considering this and given the challenges of achieving diastereoselectivity in ring-opening reactions of BCBs, herein, we present a unique method utilizing BCBs as enophiles in a mild and diastereoselective Sc(OTf)3-catalyzed formal ene reaction with thioindolinones/thiolactams, delivering 1,3-disubstituted cyclobutane derivatives in high yields and excellent regio- and diastereoselectivity. Notably, structurally different thiolactam derivatives underwent diastereoselective addition to BCBs, affording the corresponding cyclobutanes. The synthesized thioindole-substituted cyclobutanes could serve as a versatile tool for subsequent functional group manipulations.

Stereoselective Alder-Ene Reactions of Bicyclo[1.1.0]butanes: Facile Synthesis of Cyclopropyl- and Aryl-Substituted Cyclobutenes.

Bicyclo[1.1.0]butanes (BCBs), strained carbocycles comprising two fused cyclopropane rings, have become well-established building blocks in organic synthesis, medicinal chemistry, and chemical biology due to their diverse reactivity profile with radicals, nucleophiles, cations, and carbenes. The constraints of the bicyclic ring system confer high p-character on the interbridgehead C-C bond, leading to this broad reaction profile; however, the use of BCBs in pericyclic processes has to date been largely overlooked in favor of such stepwise, non-concerted additions. Here, we describe the use of BCBs as substrates for ene-like reactions with strained alkenes and alkynes, which give rise to cyclobutenes decorated with highly substituted cyclopropanes and arenes. The former products are obtained from highly stereoselective reactions with cyclopropenes, generated in situ from vinyl diazoacetates under blue light irradiation (440 nm). Cyclobutenes featuring a quaternary aryl-bearing carbon atom are prepared from equivalent reactions with arynes, which proceed in high yields under mild conditions. Mechanistic studies highlight the importance of electronic effects in this chemistry, while computational investigations support a concerted pathway and rationalize the excellent stereoselectivity of reactions with cyclopropenes.