The coupling effects of mold temperature and packing pressure fields on structure evolution of isotactic polypropylene with β-nucleating agent (iPP/β) during injection molding were systematically investigated using high-throughput in-situ synchrotron X-ray diffraction/scattering technology for the first time. A small number of β-crystals are generated in pure iPP and iPP/β due to the shear flow introduced by the filling stage. The formation of β-crystals induced by β-nucleating agent (β-NA) in iPP/β commenced after about 1.8 s of melt filling. The two-stage growth of β-crystals in iPP/β exhibits differences in growth time and orientation. Both the decrease in the lattice spacing and the β-α transition in iPP/β occur at the packing stage and are suppressed at high mold temperatures (≥ 90 °C). The polymorphism competitive growth of iPP/β is revealed, and the effects of coupling external fields on it are well elucidated by combining finite element simulation and classical nucleation theory. Additionally, the scattering intensity and orientation of iPP/β lamellae initially increase to a maximum value and subsequently decrease until reaching the equilibrium with time. Our current work lays a solid foundation to precisely customize the crystal structure of iPP/β in practical processing and thus to produce high-performance iPP products.