Cryptic Reservoirs Research Articles

Anti-Leishmania spp. antibody detection in domestic cats from a visceral leishmaniasis transmission area.

Feline leishmanial infection is reported worldwide, but the epidemiological role of domestic cats in the leishmaniasis cycle remains unclear, and cats might act as cryptic reservoir hosts in endemic areas with no feline leishmaniosis cases. Considering that, a serological screening for anti-Leishmania spp. antibodies was performed by indirect immunofluorescence antibody test (IFAT) in 389 necropsied cats' serum samples from a new visceral leishmaniasis transmission area with no feline leishmanial infection reported to unveil if the cats are being exposed to the parasite. The overall seroprevalence for Leishmania spp. was 11.05% (43/389). No association was found between sex, neutering status, age group, breed, coat length, feline immunodeficiency virus (FIV) infection, and Leishmania spp. antibody detection. A positive association was found with coat color (cats within the orange spectrum with white [particolor]) (OR = 2.47, CI 95% 1 - 6.13, P = 0.044) and a negative association (OR = 0.38, CI 95% 0.18 - 0.79, P = 0.01) between feline leukemia virus (FeLV) infection and IFAT positivity for Leishmania spp. Therefore, it is concluded that the seroprevalence found was greater than 10%, indicating contact of the protozoan with cats in the region served.

Herbivory and nutrients shape grassland soil seed banks

Anthropogenic nutrient enrichment and shifts in herbivory can lead to dramatic changes in the composition and diversity of aboveground plant communities. In turn, this can alter seed banks in the soil, which are cryptic reservoirs of plant diversity. Here, we use data from seven Nutrient Network grassland sites on four continents, encompassing a range of climatic and environmental conditions, to test the joint effects of fertilization and aboveground mammalian herbivory on seed banks and on the similarity between aboveground plant communities and seed banks. We find that fertilization decreases plant species richness and diversity in seed banks, and homogenizes composition between aboveground and seed bank communities. Fertilization increases seed bank abundance especially in the presence of herbivores, while this effect is smaller in the absence of herbivores. Our findings highlight that nutrient enrichment can weaken a diversity maintaining mechanism in grasslands, and that herbivory needs to be considered when assessing nutrient enrichment effects on seed bank abundance.

Trypanosomes infection, endosymbionts, and host preferences in tsetse flies (Glossina spp.) collected from Akagera park region, Rwanda: A correlational xenomonitoring study

Akagera National Park and its surroundings are home to tsetse flies and a number of their mammalian hosts in Rwanda. A One-health approach is being used in the control and surveillance of both animal and human trypanosomosis in Rwanda. Determination of the infection level in tsetse flies, species of trypanosomes circulating in vectors, the source of tsetse blood meal and endosymbionts is crucial in understanding the epidemiology of the disease in animals and humans in the region.Tsetse flies (n = 1101), comprising Glossina pallidipes (n = 771) and Glossina morsitans centralis (n = 330) were collected from Akagera park and surrounding areas between May 2018 and June 2019. The flies were screened for trypanosomes, vertebrate host DNA to identify sources of blood meal, and endosymbionts by PCR - High Resolution Melting analysis and amplicon sequencing. The feeding frequency and the feeding indices (selection index - W) were calculated to identify the preferred hosts. An overall trypanosome infection rate of 13.9% in the fly's Head and Proboscis (HP) and 24.3% in the Thorax and Abdomen (TA) were found. Eight trypanosome species were identified in the tsetse fly HP and TA, namely: Trypanosoma (T.) brucei brucei, T. congolense Kilifi, T. congolense savannah, T. vivax, T. simiae, T. evansi, T. godfreyi, T. grayi and T. theileri. We found no evidence of human-infective T. brucei rhodesiense. We also identified eighteen species of vertebrate hosts that tsetse flies fed on, and the most frequent one was the buffalo (Syncerus caffer) (36.5%). The frequently detected host by selection index was the rhinoceros (Diceros bicornis) (W = 16.2). Most trypanosome infections in tsetse flies were associated with the buffalo blood meal. The prevalence of tsetse endosymbionts Sodalis and Wolbachia was 2.8% and 4.8%, respectively. No Spiroplasma and Salivary Gland Hypertrophy Virus were detected. These findings implicate the buffaloes as the important reservoirs of tsetse-transmitted trypanosomes in the area. This contributes to predicting the main cryptic reservoirs and therefore guiding the effective control of the disease. The study findings provide the key scientific information that supports the current One Health collaboration in the control and surveillance of tsetse-transmitted trypanosomosis in Rwanda.

Update on pathogenesis, management, and control of Plasmodium vivax.

This is a review of Plasmodium vivax epidemiology, pathogenesis, disease presentation, treatment and innovations in control and elimination. Here, we examine the recent literature and summarize new advances and ongoing challenges in the management of P. vivax . P. vivax has a complex life cycle in the human host which impacts disease severity and treatment regimens. There is increasing data for the presence of cryptic reservoirs in the spleen and bone marrow which may contribute to chronic vivax infections and possibly disease severity. Methods to map the geospatial epidemiology of P. vivax chloroquine resistance are advancing, and they will inform local treatment guidelines. P. vivax treatment requires an 8-aminoquinoline to eradicate the dormant liver stage. Evidence suggests that higher doses of 8-aminoquinolines may be needed for radical cure of tropical frequent-relapsing strains. P. vivax is a significant global health problem. There have been recent developments in understanding the complexity of P. vivax biology and optimization of antimalarial therapy. Studies toward the development of best practices for P. vivax control and elimination programs are ongoing.

The elimination of human African trypanosomiasis: Achievements in relation to WHO road map targets for 2020.

BackgroundIn the 20th century, epidemics of human African trypanosomiasis (HAT) ravaged communities in a number of African countries. The latest surge in disease transmission was recorded in the late 1990s, with more than 35,000 cases reported annually in 1997 and 1998. In 2013, after more than a decade of sustained control efforts and steady progress, the World Health Assembly resolved to target the elimination of HAT as a public health problem by 2020. We report here on recent progress towards this goal.Methodology/principal findingsWith 992 and 663 cases reported in 2019 and 2020 respectively, the first global target was amply achieved (i.e. fewer than 2,000 HAT cases/year). Areas at moderate or higher risk of HAT, where more than 1 case/10,000 people/year are reported, shrunk to 120,000 km2 for the five-year period 2016–2020. This reduction of 83% from the 2000–2004 baseline (i.e. 709,000 km2) is slightly below the target (i.e. 90% reduction). As a result, the second global target for HAT elimination as a public health problem cannot be considered fully achieved yet. The number of health facilities able to diagnose and treat HAT expanded (+9.6% compared to a 2019 survey), thus reinforcing the capacity for passive detection and improving epidemiological knowledge of the disease. Active surveillance for gambiense HAT was sustained. In particular, 2.8 million people were actively screened in 2019 and 1.6 million in 2020, the decrease in 2020 being mainly caused by COVID-19-related restrictions. Togo and Côte d’Ivoire were the first countries to be validated for achieving elimination of HAT as a public health problem at the national level; applications from three additional countries are under review by the World Health Organization (WHO).Conclusions/significanceThe steady progress towards the elimination of HAT is a testament to the power of multi-stakeholder commitment and coordination. At the end of 2020, the World Health Assembly endorsed a new road map for 2021–2030 that set new bold targets for neglected tropical diseases. While rhodesiense HAT remains among the diseases targeted for elimination as a public health problem, gambiense HAT is targeted for elimination of transmission. The goal for gambiense HAT is expected to be particularly arduous, as it might be hindered by cryptic reservoirs and a number of other challenges (e.g. further integration of HAT surveillance and control into national health systems, availability of skilled health care workers, development of more effective and adapted tools, and funding for and coordination of elimination efforts).

The Effect of Applied Salinity and Water Stress on Chemical Suppression of Phytophthora ramorum from Soilborne Inoculum in Rhododendron.

A serious concern for nurseries is the potential for Phytophthora ramorum and other Phytophthora species to colonize roots without inducing aboveground symptoms in plants that then serve as cryptic reservoirs of inoculum. Episodic abiotic stresses that reduce plant water potential can compromise the host resistance to trigger disease development from root and crown infections during many Phytophthora-plant interactions. We conducted a series of experiments with root-inoculated Rhododendron plants in a potting soil mix to assess the influence of excess salt or water deficit on ramorum blight development and the potential for these abiotic stresses to affect the efficacy of oomycete-suppressive chemical soil treatments. During growth chamber trials, P. ramorum colonized roots of both nonsalt-treated and salt-treated plants. However, salt treatment offset the benefit realized from soil treatment with mefanoxam (Subdue Maxx) and mandipropamid (Micora), as evidenced by the enhanced pathogen colonization of roots. A 3-week episode of water stress imposed after chemical treatment but before inoculation eliminated protection against P. ramorum root colonization conferred by fosetyl-Al (Aliette). At an outdoor experimental nursery, foliar symptoms were apparent in 23% of root-inoculated plants during two trials and absent during one trial. However, the majority of inoculated plants in all trials had colonized roots with little or no aboveground symptoms. A single application of Subdue Maxx or Aliette reduced root colonization by P. ramorum in Rhododendron plants. Although salt stress did not enhance ramorum blight symptom expression at the nursery, salt partially offset protection from P. ramorum root colonization obtained by Subdue Maxx.

Indentifying and modeling the distribution of cryptic reservoirs of Ebola virus using artificial intelligence

Fruit bats (Megachiroptera) have been found to be the principal reservoirs of Ebola virus (EBOV) to humans. However, bats do not appear to be the primary reservoir in the environment and between outbreaks. The cryptic reservoir species of EBOV and its distribution have not been identified. The purpose of the study was to identify the most likely cryptic reservoir species of EBOV and the probable distribution of cryptic reservoir species where EBOV could be maintained in Sierra Leone. The Bioagent Transport and Environmental Modeling System (BioTEMS) was used to analyze mammals, arthropods, plants and protists in order to identify the most likely species to be the cryptic reservoir for EBOV. ArcGIS and BioTEMS were used to determine the probable distribution of cryptic reservoir species. BioTEMS identified free-living pathogenic amoebae (FLPA) as the probable cryptic reservoir species (Test Performance = 93.3). Diptera in the order Chrysops were also identified as possible secondary reservoirs and mechanical vectors of EBOV. Distribution of likely hot spots for FLPA and phytotelmata/tree-holes were identified in several regions of Sierra Leone, primarily in the southeast and are similar to those predicted by other authors, but at a much higher resolution (15 m for BioTEMS verses up to 5 km in other studies). Water-filled cavities (phytotelmata), specifically tree-holes, were identified as the most likely sites for the cycle of transmission to occur among FLPA and susceptible secondary reservoirs. Free-living pathogenic amoebae are not only pathogenic to humans and animals but they serve as reservoirs and Trojan horses of infection as well. Identifying what and where cryptic reservoirs of EBOV persist between outbreaks provides an opportunity for the first time to conduct environmental epidemiologic surveillance to mitigate outbreaks and to test anti-microbial delivery systems such as the ProVector® to reduce EBOVand FLPA.Keywords: Filovirus, Amoeba, Epidemiology, Machine Learning, Vector, Disaster Management

Monitoring the elimination of human African trypanosomiasis: Update to 2016.

BackgroundHuman African trypanosomiasis (HAT) is a neglected tropical disease targeted for elimination ‘as a public health problem’ by 2020. The indicators to monitor progress towards the target are based on the number of reported cases, the related areas and populations exposed at various levels of risk, and the coverage of surveillance activities. Based on data provided by the National Sleeping Sickness Control Programmes (NSSCP), Non-Governmental Organizations (NGOs) and research institutions—and assembled in the Atlas of HAT—the World Health Organization (WHO) provides here an update to 2016 for these indicators, as well as an analysis of the epidemiological situation.ResultsTrends for the two primary indicators of elimination are on track for the 2020 goal: 2,164 cases of HAT were reported in 2016 (as compared to the milestone of 4,000 cases), and for the period 2012–2016 280,000 km2 are estimated to be at moderate risk or higher (i.e. ≥ 1 case/10,000 people/year), as compared to the milestone of 230,000 km2. These figures correspond to reductions of 92% and 61% as compared to the respective baselines (i.e. 26,550 HAT cases in the year 2000, and 709,000 km2 exposed at various levels of risk for the period 2000–2004). Among the secondary indicators, an overall improvement in the coverage of at risk populations by surveillance activities was observed. Regarding passive surveillance, the number of fixed health facilities providing gambiense HAT diagnosis or treatment expanded, with 1,338 enumerated in endemic countries in 2017 (+52% as compared to the survey completed only sixteen months earlier). Concerning rhodesiense HAT, 124 health facilities currently provide diagnosis or treatment. The broadening of passive surveillance is occurring in a context of fairly stable intensity of active case finding, with between 1.8 million and 2.4 million people screened per year over the period 2012–2016.DiscussionElimination of HAT as a public health problem by 2020 seems within reach, as the epidemiological trends observed in previous years are confirmed in this latest 2016 monitoring update. However, looking beyond 2020, and in particular to the 2030 goal of elimination of transmission as zero cases for the gambiense form of the disease only, there is no room for complacency. Challenges still abound, including ensuring the effective integration of HAT control activities in the health system, sustaining the commitment of donors and HAT endemic countries, and clarifying the extent of the threat posed by cryptic reservoirs (e.g. human asymptomatic carriers and the possible animal reservoirs in gambiense HAT epidemiology). WHO provides through the network for HAT elimination the essential coordination of the wide range of stakeholders to ensure synergy of efforts.

ANTI INFLAMMATORY EFFECT OF CIPROFLOXACIN, AZITHROMYCIN AND DICLOFENAC SODIUM ON CARRAGEENAN INDUCED HIND PAW EDEMA IN MICE

Background: Obviously, antibacterial agents are primarily directed against bacteria. However, because microorganisms can initiate an exaggerated inflammatory reaction, and as pathogens which persist in cryptic reservoirs (cells or granuloma tissue) can be the underlying cause of chronic inflammation, the hypothesis that antibacterials can down regulate inflammation. Methodology: Healthy adult mice weighing 20 - 30 g and aged 6-8 weeks, each group 6 mice were included. 1% carrageenan administered to produce inflammation. Grouping: Group 1: Normal saline 0.2 ml. i.p., Group 2: Diclofenac sodium 25mg/kg, Group 3 Ciprofloxacin 50 mg/kg, Group 4: Azithromycin 20mg/kg. Drugs were administered Intra Peritoneal. After 30 min of test drugs administration each group of mice were received subplantar administration of 0.05ml of saline (Control) or 0.05ml carrageenan (1%) for test groups 2 to 4. Paw volumes were measured by dipping in to the mercury plethysmograph at 30, 60, 120 and 180 minutes and results were tabulated. Results: Diclofenac, ciproflaoxin, Azithromycin inhibited paw edema in % at 30min 42.85, 28.55, 14.28, at 60min 75, 50, 25, at 120min 71.42, 42.85, 14.28, and at 180 min 50, 50, 25 respectively. Conclusion: Ciprofloxacin (50mg/kg) has exhibited consistent anti-inflammatory, but the anti-inflammatory activity of is less than that of Diclofenac sodium and Azithromycin also has exhibited anti-inflammatory activity, though much less when compared to Diclofenac sodium and Ciprofloxacin. Key words: Anti inflammatory effect; Azithromycin; Ciprofloxacin; Diclofenac Sodium; Paw edema; Mice.

Molecular evidence of Ebola Reston virus infection in Philippine bats.

BackgroundIn 2008–09, evidence of Reston ebolavirus (RESTV) infection was found in domestic pigs and pig workers in the Philippines. With species of bats having been shown to be the cryptic reservoir of filoviruses elsewhere, the Philippine government, in conjunction with the Food and Agriculture Organization of the United Nations, assembled a multi-disciplinary and multi-institutional team to investigate Philippine bats as the possible reservoir of RESTV.MethodsThe team undertook surveillance of bat populations at multiple locations during 2010 using both serology and molecular assays.ResultsA total of 464 bats from 21 species were sampled. We found both molecular and serologic evidence of RESTV infection in multiple bat species. RNA was detected with quantitative PCR (qPCR) in oropharyngeal swabs taken from Miniopterus schreibersii, with three samples yielding a product on conventional hemi-nested PCR whose sequences differed from a Philippine pig isolate by a single nucleotide. Uncorroborated qPCR detections may indicate RESTV nucleic acid in several additional bat species (M. australis, C. brachyotis and Ch. plicata). We also detected anti-RESTV antibodies in three bats (Acerodon jubatus) using both Western blot and ELISA.ConclusionsThe findings suggest that ebolavirus infection is taxonomically widespread in Philippine bats, but the evident low prevalence and low viral load warrants expanded surveillance to elaborate the findings, and more broadly, to determine the taxonomic and geographic occurrence of ebolaviruses in bats in the region.

Unusual influenza A viruses in bats.

Influenza A viruses infect a remarkably diverse number of hosts. Two completely new influenza A virus subtypes were recently discovered in bats, dramatically expanding the host range of the virus. These bat viruses are extremely divergent from all other known strains and likely have unique replication cycles. Phylogenetic analysis indicates long-term, isolated evolution in bats. This is supported by a high seroprevalence in sampled bat populations. As bats represent ~20% of all classified mammals, these findings suggests the presence of a massive cryptic reservoir of poorly characterized influenza A viruses. Here, we review the exciting progress made on understanding these newly discovered viruses, and discuss their zoonotic potential.

Late Permian to Late Jurassic “microproblematica” of Saudi Arabia: Possible palaeobiological assignments and roles in the palaeoenviromental reconstructions

ABSTRACTPalaeoenvironmental interpretation of Permian and Jurassic intertidal to very shallow-marine carbonates is difficult where typical shallow-marine microfossils are either absent or sparse. A collection of microfossils originally considered as “microproblematica” because of their uncertain biological affinities are, however, often present. These include species of Aeolisaccus, Gakhumella, Prethocoprolithus, Thaumatoporella, Favreina and Terebella. Observations of their vertical distribution and relationship with carbonate fabrics reveal their environmental preferences, and these contribute to palaeoenvironmental interpretation within a spectrum of very shallow-marine settings that previously precluded refinement. The recognition of high-frequency depositional cycles and definition of cryptic reservoir layering in such shallow to marginal-marine carbonates is now facilitated by the use of these microfossils from the Khuff, Hanifa, Jubaila, Arab and Hith formations.Aeolisaccus dunningtoni is interpreted as either a fossilised cyanobacterial tube or possible foraminifera of Early Permian to Late Jurassic age. It is well represented within mudstones, wackestones and packstones of supratidal flats to very shallow intertidal palaeoenvironments with occasional freshwater influence. The microbialitic Gakhumella cf. huberi is locally present in these Upper Jurassic intertidal to very shallow-marine bioconstructions. Prethocoprolithus centripetalus is a faecal ribbon, considered to be of mollusk origin, within shallow subtidal grainstones and packstones. Thaumatoporella parvovesiculifera is considered a green alga that is typically found encrusting biocomponent fragments. It ranges from the Middle Triassic to Upper Cretaceous and is extensively present in intertidal, possibly hypersaline to shallow-marine, normal salinity lagoon grainstones and mud-lean packstones. Certain types of the distinctively canaliculate, microcoprolitic decapod crustacean faecal pellets, of the genus Favreina, are diagnostic of Late Jurassic intertidal to shallow subtidal conditions found within packstones. Terebella lapilloides is an agglutinated polychaete tube, typical of Upper Jurassic intertidal to shallow-marine packstones.

High-level, lasting antiviral immunity induced by a bimodal AIDS vaccine and boosted by live-virus exposure

To characterize the correlates of protection from systemic infection in a vaccinated rhesus macaque, RAt-9, which had been challenged sequentially with two related clade C simian/human immunodeficiency viruses (SHIV-Cs) yet remained aviremic for more than 5 years despite indirect evidence of cryptic infection. To measure long-term anti-SHIV-C immunity, host genetics and gene-expression patterns for protective correlates. Long-term immune reactivity was evaluated and identification of virus in RAt-9 was attempted by RT-PCR analysis of concentrated plasma and blood transfer to CD8(+) cell-depleted infant macaques. Full MHC genotyping of RAt-9, TRIM5α and KIR3DL allelic expression analysis of PBMC, and microarray gene expression analysis were performed. All attempts to detect/isolate virus, including blood transfer to CD8(+) cell-depleted infant rhesus macaques, were negative, and the animal maintained normal levels of memory CD4(+) T cells in both peripheral blood and gut tissues. However, RAt-9 maintained high levels of anti-SHIV-C humoral and cellular immunity, including reactivity to nonvaccine neoantigens (Nef and Rev), up to 63 months postinitial challenge, suggesting chronic sub-threshold infection. RAt-9 expressed the Mamu A*001 allele negative for B*008 and B*017, had a B13 serotype, and had increased expression of killer-cell immunoglobulin-like receptors (KIRs) previously linked to favorable outcomes of lentiviral infection. Elements of the gene expression profiling coincided with genotyping results. RAt-9 also displayed CD8 cell noncytotoxic antiviral response (CNAR) activity. Monkey RAt-9 is the first example of a virus-exposed, persistently aviremic animal that has maintained long-term, high-level cellular and humoral antiviral immunity in the absence of an identifiable cryptic reservoir.

TRIGGER EVENTS: ENVIROCLIMATIC COUPLING OF EBOLA HEMORRHAGIC FEVER OUTBREAKS

We use spatially continuous satellite data as a correlate of precipitation within tropical Africa and show that the majority of documented Ebola hemorrhagic fever outbreaks were closely associated with sharply drier conditions at the end of the rainy season. We propose that these trigger events may enhance transmission of Ebola virus from its cryptic reservoir to humans. These findings suggest specific directions to help understand the sylvatic cycle of the virus and may provide early warning tools to detect possible future outbreaks of this enigmatic disease.