Coral Reef Habitats Research Articles

Correction to: The impact of coral reef habitat and microbial abundance status on sponge-associated prokaryotic communities

Correction to: The impact of coral reef habitat and microbial abundance status on sponge-associated prokaryotic communities

The impact of coral reef habitat and microbial abundance status on sponge-associated prokaryotic communities

AbstractSponges are one of the oldest lineages of animals on Earth and play key roles in shaping marine ecosystems. They are diverse, with more than 9600 species known to science, and come in a wide range of shapes, sizes, and colours. Sponges are, furthermore, known to host diverse communities of microbial symbionts, which play important roles in their physiology and ecology. In the present study, we sampled prokaryotic communities from 24 sponge species inhabiting coral reef flat and slope habitats off the coast of SW Celebes (Indonesia) in addition to sediment and seawater. The prokaryotic profiles of several sponge species were characterised for the first time. In line with previous studies, we revealed pronounced variation in diversity and composition among species with high microbial abundance (HMA) or low microbial abundance (LMA) status playing an important role in structuring prokaryotic communities across host sponge species. In addition to this, reef habitat (flat versus slope) also played a significant role in structuring prokaryotic communities. Most species in the reef slope habitat housed prokaryotic communities with a consistent profile of several cyanobacterial and prokaryotic OTUs, whereas these OTUs were largely absent from sponges inhabiting the reef flat habitat. Instead, they tended to house highly abundant bacterial populations related to the Synechococcus spongiarum group. We propose that specific strains of S. spongiarum may play a key role in enabling their host sponges to survive in an, otherwise, inhospitable environment (e.g., high irradiance and temperature) and, thus, help to explain differences in sponge composition between coral reef flat and slope habitats.

Using foraminifera to assess changes in marine coastal habitats of Caribbean Panama since the Middle Holocene

Humans settled the Bocas del Toro archipelago of Caribbean Panama ~690 CE. Coastal land was cleared for agriculture in the late 1880s and in recent decades water quality degradation has been detected. To investigate changes that support a decline in water quality and to assess differences in salinity caused by increased runoff from cleared lands, benthic foraminifera of Almirante Bay served as an environmental proxy to compare modern and Middle Holocene times. The foraminiferal community structure of 17 modern mangrove, seagrass, and coral reef habitats <2 m deep was analyzed in combination with 18 samples of ~6600-year-old coral reef, seagrass and muddy molluscan biofacies from Isla Colón island.The foraminiferal communities' species and diversity overlap considerably among habitats of both ages, and there is more difference in species' proportions between the ages than among habitats of either age. These patterns reflect high connectivity across adjacent habitats in this embayed, patch-reef setting. Assemblages from Middle Holocene molluscan muds and modern mangroves are least diverse, fairly similar, and well differentiated from those of seagrass and coral habitats. Foraminiferal wall structure suggests more freshwater input in modern times, consistent with forest clear-cutting for agriculture, although both ages fall within the low end of normal salinity. Increased freshwater input influenced assemblage changes but they were not sufficient to reduce measured diversity. Reported declines in the bay's water quality have also not resulted in net foraminiferal diversity loss from ~6600 years ago, indicating substantial resilience in these extremely shallow, tropical coastal communities.

Community structure and environmental drivers of offshore hard-bottom reef fishes in the northern Gulf of Mexico

Abstract Understanding patterns in community structure in large marine ecosystems is necessary for advancing community- and ecosystem-based approaches to marine fisheries management. We analyzed data from a large-scale, fishery-independent video survey to quantify the structure of reef fish communities on offshore hard-bottom reef habitats in the northern Gulf of Mexico (nGOM). A novel aspect of this work is that all species visualized on videos were identified and enumerated over a 13-year period, which allowed for a comprehensive analysis of fish community structure. We observed a total of 243 fish species from 54 families and 14 orders. Species richness and biodiversity varied considerably across the nGOM and were highest in regions that harbor extensive coral reef habitat (south Florida, Louisiana-Texas shelf). Multivariate analyses identified 12 species assemblages, with important fishery species and species of concern (i.e. IUCN-listed) occurring in the largest identified assemblages. One assemblage composed mostly of large-bodied fishery species accounted for 45% by number and 89% by weight of all fish observed. Species assemblages were most strongly associated with depth, temperature, and substrate composition, with weaker associations with the amount of attached algae and vertical relief, while species richness was positively correlated with bottom water temperature. In general, large-scale bathymetric and hydrographic factors (e.g. depth, temperature) were more important than local topographic structure and biogenic habitat in structuring reef fish communities at the spatial scales (i.e.1000 km) considered here. Our results advance ecosystem-based approaches to fisheries management by providing a basis for incorporating multispecies spatial dynamics into the monitoring and assessment of hard-bottom reef fish communities in the nGOM.

Different bacterial communities of the coral area and its surrounding sediments in Daya Bay, South China Sea

Sediment in coral reef habitats has a tight interaction with coral reefs. Bacterial communities are a critical part of sediments and play a vital role in marine ecosystems, as well as coral reef habitats. To determine whether the bacterial structure of sediments differs between the inside and surrounding coral area, we compared the bacterial community on the surface of the dead coral skeleton (CS) and three soft sediment sites (SS, SS10, SS50) in and around the coral reef distribution of Dalajia Island in Daya Bay. Our results showed that bacterial diversity and composition of the coral skeleton had a significant difference with that of surrounding soft sediments. Proteobacteria and Actinobacteria were dominant in CS, and Proteobacteria and Bacteroidetes were dominant in SS, SS10, and SS50. Substrate type and environmental parameters are the main factors in the separation between coral skeletons and sediment. Salinity and pH were largely negatively correlated with CS, indicating they are primary factors that potentially impact coral mortality and revival. Heavy metals were positively related to sediments and they are potential threats to coral growth. Our work provides updated data on bacterial structure in the coastal coral area, contributing to policy-making and management of coastal activities to minimize the degradation of coral reefs.

Water mass characteristics and hydrodynamics at an inshore versus an offshore mid-Norwegian cold-water coral reef habitat

Water mass characteristics and hydrodynamics at an inshore versus an offshore mid-Norwegian cold-water coral reef habitat

Hurricane Irma Linked to Coral Skeletal Density Shifts on the Florida Keys Reef Tract.

Coral reefs are at risk due to various global and local anthropogenic stressors that impact the health of reef ecosystems worldwide. The most recent climate models predict that climate change will increase the frequency and intensity of tropical storms. This increased storm occurrence and strength will likely compromise coral reef structures and habitats for reef-dwelling organisms, including across the Florida Keys Reef Tract (FKRT), the most extensive tropical reef system along the US coast. While several recent studies reveal the chronic impacts of tropical storms on corals, relatively little is known about the effects of major storm events on coral growth and how these effects vary over spatiotemporal scales. Here, I characterize the skeletal growth of two common Caribbean reef-building coral species, Siderastrea siderea and Pseudodiploria strigosa, before and after Hurricane Irma to investigate the storm's impact on coral skeletal growth on inner and outer reefs of the FKRT. Coral cores were extracted from both species at four inner and four outer reef sites in May 2015, before Hurricane Irma struck the Florida Keys in September 2017. Subsequently, 33 micro-cores were collected in May 2019, two years after the storm traversed our previously cored coral colonies. A three-way ANOVA model with storm, species, and reef location as the three factors was used to assess the impact of the storm on each of three growth parameters: skeletal density, linear extension, and calcification rates. Results reveal no difference in the coral annual skeletal growth parameters pre- and post-Hurricane Irma, although previously quantified differences in these growth parameters across species and location were observed. However, analysis of the "yearly" change in annual skeletal growth parameters showed significant differences in skeletal density across groups before and after Hurricane Irma, but not for linear extension and calcification rates. Our findings improve an understanding of the impacts of tropical storms on coral skeletal growth and offer new insights into how we can employ corals' innate growth capacities to help conserve coral reefs under climate change.

Learnings from the past to inform future ecosystem restoration projects: an Australian perspective

Coastal and marine ecosystems provide valuable ecosystem services and functions. Unfortunately, these habitats have experienced increasing anthropogenic and climate‐related pressures, leading to significant degradation and loss not only in Australia but also globally. Hence, the urgency for coastal and marine ecosystem restoration has never been more pronounced. We present a synthesis of 151 projects on coastal and marine restoration in Australia spanning mangrove, seagrass, tidal marsh, kelp, shellfish reef, and coral ecosystems. Our findings reveal increased restoration efforts over the past 30 years, with an increased focus on coral and shellfish reef habitats. Across Australia, most efforts were in southeastern Australia, with a noticeable gap in the Northern Territory. Restoration strategies focused on enhancing propagule availability (74%) and substrate availability (42%), with additional efforts toward implementing top–down (7%) and bottom–up (4%) controls to boost natural recruitment. Projects were carried out with the participation mostly of research universities (45%), followed by state government entities (42%), philanthropy (34%), and private companies (16%). Funding came primarily from governmental sources, such as state government entities (50%), the commonwealth (44%), and philanthropy (19%). Restoration outcomes are centered on monitoring growth and survival resulting from both single and multiple restoration actions. Our findings highlight key factors influencing natural recruitment across habitat types, where sedimentation and species reproductive biology play a critical role. While acknowledging that our results represent only a small fraction of Australia's coastal and marine restoration efforts, our intent is to contribute insights that can support large‐scale restoration actions not only in Australia but also on a global scale.

Sediment source and dose influence the larval performance of the threatened coral Orbicella faveolata.

The effects of turbidity and sedimentation stress on early life stages of corals are poorly understood, particularly in Atlantic species. Dredging operations, beach nourishment, and other coastal construction activities can increase sedimentation and turbidity in nearby coral reef habitats and have the potential to negatively affect coral larval development and metamorphosis, reducing sexual reproduction success. In this study, we investigated the performance of larvae of the threatened Caribbean coral species Orbicella faveolata exposed to suspended sediments collected from a reef site in southeast Florida recently impacted by dredging (Port of Miami), and compared it to the performance of larvae exposed to sediments collected from the offshore, natal reef of the parent colonies. In a laboratory experiment, we tested whether low and high doses of each of these sediment types affected the survival, settlement, and respiration of coral larvae compared to a no-sediment control treatment. In addition, we analyzed the sediments used in the experiments with 16S rRNA gene amplicon sequencing to assess differences in the microbial communities present in the Port versus Reef sediments, and their potential impact on coral performance. Overall, only O. faveolata larvae exposed to the high-dose Port sediment treatment had significantly lower survival rates compared to the control treatment, suggesting an initial tolerance to elevated suspended sediments. However, significantly lower settlement rates were observed in both Port treatments (low- and high-dose) compared to the control treatment one week after exposure, suggesting strong latent effects. Sediments collected near the Port also contained different microbial communities than Reef sediments, and higher relative abundances of the bacteria Desulfobacterales, which has been associated with coral disease. We hypothesize that differences in microbial communities between the two sediments may be a contributing factor in explaining the observed differences in larval performance. Together, these results suggest that the settlement success and survival of O. faveolata larvae are more readily compromised by encountering port inlet sediments compared to reef sediments, with potentially important consequences for the recruitment success of this species in affected areas.

Mesoscale Eddies Influence Coral Reef Environments in the Northwest Gulf of Mexico

AbstractCoral reefs globally are experiencing more frequent and severe warming events due to anthropogenic driven climate change. Subtropical reefs experience more seasonal variability than lower latitude reefs making them typically more resilient to climate change. With relatively stable coral cover in comparison to other global coral reefs, Flower Garden Banks National Marine Sanctuary (FGBNMS) in the Gulf of Mexico is a series of 17 reefs and banks located on the continental shelf‐edge containing a variety of shallow (0–30 m) and mesophotic (30–150 m) coral reef habitats. Here, we use satellite data products to associate open ocean Argo float profiles with eddy features over FGBNMS to study the shelf‐edge reef environment spanning nearly two decades (2003–2022). Satellite data show that FGBNMS is frequently influenced (∼15 days/month) by mesoscale eddies. The upper water column variability (0–25 m) is most influenced by the seasonal mixed layer despite eddy interaction. Subsurface seasonal ranges of temperature and salinity are enhanced or suppressed depending on the influence of eddies in relation to the mixed layer depth. Within the mesophotic zone (0–150 m), the largest range of thermal variability between anticyclonic and cyclonic eddies is between 50 and 150 m upwards of 5°C. However, these observed dynamics will likely change as a result of eddy variability associated with projected warming and Loop Current weakening, leading to increased thermal stress in the future.

Recovery potential of fish and coral populations following ecological disturbance

AbstractThe health of coral reef benthic and fish communities is implicitly connected, yet typically studied and managed separately. By developing a coupled reef population model that connects coral populations and reef fish biomass through the habitat complexity that corals build and fish live among, we aim to address this gap by holistically quantifying ecological feedbacks and responses to ecological stressors. We explored the impacts of fishing effort in conjunction with three types of ecological disturbances as they propagated through a coral reef ecosystem: (1) a disturbance that disproportionately affected small, bio‐energetically vulnerable colonies, (2) a disturbance that predominantly affected large, mechanically vulnerable colonies, and (3) a disturbance that affected colonies of all sizes randomly. We found that joint coral and fish population recovery was fastest and most complete under events affecting small colonies, followed by recovery from disturbances affecting random sizes, and lastly large‐colony disturbances. These results suggest that the retention versus loss of large coral colonies with high reproductive potential critically influenced population recovery. Low fishing levels maintained fish and coral populations and allowed for recovery after disturbances, whereas high fishing levels prevented recovery due to greater fish‐dependent coral mortality. Finally, we tested various formulations of the relationship between coral size and habitat complexity (i.e., exponential, linear, logarithmic) that constrain fish carrying capacity. All formulations led to similar population projections in most disturbance scenarios, but there were exceptions where the timing and trajectory of recovery differed, such as faster and greater recovery potential when complexity is logarithmic with respect to coral size. These findings suggest that fishing and habitat complexity mediate the recovery of coral reef populations, emphasizing the importance of describing linkages between coral size distribution and reef habitat structure. Furthermore, our results highlight the utility of the coupled‐model framework for understanding and managing the impact of disturbances at ecosystem scales.

Evaluating error sources to improve precision in the co-registration of underwater 3D models

Change detection is an essential and widely used approach for investigating ecosystem dynamics. Multi-temporal 3D models increasingly underpin photogrammetry-based analyses of change for many ecologically relevant attributes. To detect change, it is necessary to accurately align 3D models collected at different times using a process referred to as co-registration. However, achieving precise co-registration is difficult in underwater habitats due to practical challenges intrinsic to surveying them. These include a lack of accurate georeferencing information, variable light, turbidity and weather conditions, and diving restrictions dictated by the diver's pressure exposure over time. Here we present an efficient co-registration workflow for 3D models that directly addresses these challenges, derived from underwater structure-from-motion methods. To test our approach, we used 3D models from across a wide range of coral reef habitats covering all those that one may encounter in shallow reefs (15 m depth and above). We then identified and empirically estimated four key sources of error: co-registration, 3D processing, image acquisition, and reference and scaling features (RSF) placement, and quantified their relative contributions to the overall error. Our proposed co-registration workflow had a mean precision of 1.37 ± 16.55 mm. Image acquisition and RSF placement errors contributed the most to the total workflow error (37% and 53%, respectively), while the contribution of co-registration and 3D processing errors was minimal (3% and 7%, respectively). As a result of our analysis, we provide ‘good practice’ guidelines to reduce errors associated with photogrammetric workflows and to facilitate efficient and reliable detection of 3D change in complex underwater ecosystems.

Performance of high-resolution MUR satellite sea surface temperature data as a proxy for near-surface in situ temperatures on neotropical reefs

As ocean temperatures increase, so does the need for accurate, regular, and widespread temperature data. This is especially important for researchers studying corals, which can be pushed over their bleaching thresholds by small, sustained changes in water temperature. Satellite data products offer longitudinal estimates of sea surface temperature (SST) taken at regular intervals without the ongoing costs and geospatial limits associated with underwater temperature loggers. However, previous work indicates satellite data are sometimes characterized by significant temperature biases, particularly in stratified coastal waters. Here, we compared the foundation sea surface temperature (fSST) estimated from a highly processed, gridded satellite data set (GHRSST MUR L4 Global SST) to in situ temperature (IST) data collected from coral reef habitats in the top 20 m of the water column at 19 sites in Panama. Comparisons between Pacific and Caribbean coasts and between upwelling and non-upwelling seasons provide a robust test of the utility of this product to estimate subsurface temperatures. The mean differences between fSST and IST show that MUR fSST accurately reflects temperatures at shallow (&lt;9 m) depths on the Caribbean coast (mean bias ≤0.55°C ± standard error (SE) 0.01°C) and during the non-upwelling season on the Pacific coast (mean bias ≤0.26°C ± SE 0.03°C). MUR fSST poorly reflects IST during the Pacific upwelling season, especially at sites 12 m and deeper. In such cases, 66% of satellite estimates deviated from ISTs by &gt;1°C. Our findings underscore how highly processed SST data products should be ground-truthed before being used as a substitute for IST, especially in upwelling areas.

Multi-Scale Coral Reef and Seascape Habitat Variables Combine to Influence Reef Fish Assemblages

While benthic characteristics of coral reef habitats are a major driver of the structure of coral reef fish assemblages, non-reef habitats adjacent to coral reefs (e.g., mangroves, seagrass beds, and macroalgal beds) can affect reef fish assemblages. Here, we investigate how reef fish assemblages respond to local-scale benthic habitats within a coral reef and larger-scale adjacent seascape features (habitats within 500 m of coral reefs) on Siquijor Island in the Philippines. We examined an abundance of species for the entire reef fish assemblage and within the assemblages of parrotfishes (subfamily Scarinae) and wrasses (family Labridae). Five distinct habitat types were identified in a cluster analysis, which incorporated benthic characteristics within coral reefs and habitats adjacent to coral reefs. We found that the diversity and structure of coral reef fish assemblages were affected by benthic characteristics within coral reefs and also by benthic habitat types adjacent to coral reefs. Individual species responses and juveniles of certain species demonstrated uniquely high abundances in habitat clusters characterized by the non-reef habitats surrounding coral reefs. Considering coral reef habitats and adjacent non-reef habitats as a holistic, interconnected seascape will provide better estimations of the drivers of the structures of coral reef fish assemblages.

Habitat suitability model of future coral reef region in the Halmahera Waters under the projection of environmental pressures from future climate change and coastal pollution

The coral reef region of the Halmahera waters situated within the tropical area of the coral triangle, covers approximately 193,126 km2, with coral reef habitats occupying roughly 958.47 km2. The coral reefs in Halmahera waters are essential for ecosystem services and local fisheries. However, they are at risk from climate change and coastal pollution. This study aimed to develop habitat suitability models for coral reefs in the Halmahera waters under future climate change scenarios. MaxEnt modeling was employed to project suitability for the coral Acropora spp. using occurrence data. Suitability projections were made for 2050 under IPCC RCP 2.6, 6.0, and 8.5 scenarios, assuming no measures are taken to mitigate coastal water pollution. Environmental factors considered in the modeling included temperature, salinity, current velocity, pH, sunlight penetration, and chlorophyll levels. Results demonstrated a significant decline in habitat suitability, with an 85% loss of highly suitable areas under RCP 2.6 – 8.5 compared to current conditions (741 km2). Chlorophyll levels, a marker of coastal pollution, were predicted to be the most influential factor, followed by temperature and salinity. The findings highlight the need to reduce global carbon emissions and implement conservation measures to mitigate coastal water pollution in preserving coral reef habitats.

Designation of a maritime conservation area in the waters of Haruku-Sameth, Central Maluku Regency

Two traditional villages in the Central Maluku Regency are called Haruku-Samet. They have unique historical and ecological potential, as well as being locations for traditional ceremonies and historical maritime landmarks. The potential exists for development as a marine conservation area. The study’s objectives are to evaluate and identify the type of designated maritime conservation area. The study was carried out from April through October 2020. Data on the species and density of seagrass and mangroves, as well as the percentage of coral reef cover, were gathered by surveys and observations. Community organizations and fishermen participated in participatory mapping, interviews, and discussions to gather data on the potential and uses of coastal and marine resources. Mangrove, seagrass, and coral reef habitat distribution was determined by field surveys, with supported by an examination of Landsat 8 imagery. In compliance with the E-KKP3K Supplement Guidelines (Supplement 1), 20 assessment indicators are analyzed for the identification, inventory, and reserve of Maritime Conservation Areas. According to the results, the candidate for the traditional marine conservation area of the Haruku-Sameth villages was deemed highly suitable for development as a conservation area under the category of Maritime Conservation Area, specifically classified as a Maritime Indigenous Protection Area.

Temporal changes in habitat use by dugongs in a spatially restricted coral reef environment

Context The dynamic habitat use by dugongs (Dugong dugon) in small coral reef lagoon systems spatially limited by tides is not well understood and has hampered adaptive management. Aims We investigated how dugongs locally used a high conservation value coral-reef lagoon system during different seasons and tides to support local management. Methods We conducted local-scale aerial surveys to document the seasonal and tidal changes in the distribution and number of dugongs over seagrass and non-seagrass coral reef habitats in a small lagoon in New Caledonia. The surveys were conducted fortnightly over 18 months in different seasons and at different tides. Temperature loggers and existing local footage of dugong herding behaviour were used to study the habitat use and behaviour of the animals in the area. Key results More dugongs were sighted in Cap Goulvain during the cool season than during the warm season. As tides restricted access to the intertidal seagrass meadows and during the cool season, more dugongs were sighted outside the lagoon on the fore reef shelf outside the lagoon. Dugongs were resting in large aggregations during their use of this non-seagrass habitat. Conclusions Our study emphasises the importance of non-seagrass habitats for dugongs in spatially restricted coral reef environments as well as the importance of considering outer lagoon habitats as key dugong management areas. This study also adds evidence of behavioural thermoregulation in dugongs. Implications The development of dynamic management strategies is essential, especially where different habitats should be protected at different times of the year.

Benthic habitat sediments mapping in coral reef area using amalgamation of multi-source and multi-modal remote sensing data

Scientific management of coral reefs is a global research topic due to their latent economic value and ecological significance. This research benefits from optical and acoustic remote sensing technology with high spatial resolution, sufficient coverage, and stable repeatability. However, each sensor with its own set of limitations, such as insufficient penetration ability, limited sensor resolution and range, which often hinder their applications in the precise classification of coral reef habitats. To address these issues, a novel scheme integrating airborne laser bathymetry (ALB), multibeam echo sounder (MBES) and the multispectral image is designed to serve large-scale and high-precision coral reef habitat sediments research. This scheme focuses on valuable attribute mining, inconsistent coverage, feature default, and redundancy according to multi-source data used in engineering demands. After per-system pretreating, numerous properties, including band, waveform, intensity, terrain, and derivative characteristics, are extracted and quantitatively analyzed to be responsible for habitat description. Subsequently, a complete seabed terrain is generated using the LightGBM regression model to establish the conversion relationship between satellite images and depth. Eventually, a new benthic habitat sediments classification method called RF-SAPSO-LightGBM is introduced with a powerful generalization ability. The unique functions of automatic default feature completion and optimal parameter search improve the discrimination ability of complex sediments. The results indicate that the new method outperforms five other approaches in sediment classification accuracy, and the combination of multi-source data provides more extensive coverage and higher accuracy with an overall of 87. 9%. In comparison, the accuracy values for multispectral image and terrain data alone are 74.5% and 54.7% respectively.

Cryptic corals thriving in dynamic environments may hold key insights into future coral reef habitats

The coastal waters of Texas have dynamic environmental conditions and are heavily influenced by anthropogenic stressors, which are not conducive for corals. However, an unidentified coral has been documented for the first time in this ecosystem, specifically in Packery Channel, Texas, which is an artificial channel on jetty rocks connecting the Gulf of Mexico and Corpus Christi Bay. This research explored the strategies that these corals utilize to survive in rapidly fluctuating environmental conditions. Extensive in-water-field surveys were conducted in Packery Channel, Texas, over a year to 1) document environmental variability and 2) investigate the symbiotic relationship in the observed corals by a) measuring chlorophyll concentrations and symbiont densities and b) measuring the size of the corallites on each coral colony and zooplankton abundance within the jetty. Physical environmental data (e.g., turbidity, water temperature, and irradiance) and coral biological samples were collected within each season (e.g., winter, spring, summer, and fall). Additionally, plankton abundance measurements were assessed each season at the highest and lowest tides of the full-moon cycle. This study showed that these corals could withstand suboptimal environmental conditions, including broad water temperature (9.4–31.5 °C) and turbidity (2.5–95.3 NTU) ranges. Biological analyses show the most chlorophyll present per symbiont in the winter, while the spring, summer, and fall had the highest symbionts. This correlates with the environmental data fluctuating the least in the summer and fall (e.g., lower turbidity and higher irradiance measurements). This could suggest that the zooxanthellae cells were able to spend their energy on photosynthesis and reproduction in the fall and summer seasons rather than spending their energy to survive in the fluctuating environmental conditions in the winter season. Understanding how corals survive in rapidly fluctuating environmental conditions could provide insights into potential phenotypic plasticity.

Low diversity and abundance of predatory fishes in a peripheral coral reef ecosystem.

Semi-enclosed seas are often associated with elevated local threats and distinct biogeographic patterns among marine fishes, but our understanding of how fish assemblage dynamics vary in relation to relatively small semi-enclosed seas (e.g., the Gulf of Aqaba) remains limited. Baited remote underwater video surveys (n = 111) were conducted across ~300 km of coral reef habitats in the Gulf of Aqaba and the northern Red Sea. A total of 55 predatory fish species were detected, with less than half of all species (n = 23) observed in both basins. Relative abundance patterns between the Gulf of Aqaba and the northern Red Sea were variable among taxa, but nearly twice as many predatory fish were observed per unit of effort in the northern Red Sea. In general, assemblages in both basins were dominated by three taxa (Epinephelinae, Carangidae, and Lethrinidae). Large-bodied and threatened species were recorded at very low abundances. Multivariate analysis revealed distinct assemblage structuring of coral reef predators between the Gulf of Aqaba and the northern Red Sea. Most of the species driving these differences were recorded in both basins, but occurred at varying levels of abundance. Environmental factors were largely unsuccessful in explaining variation in assemblage structuring. These findings indicate that biological assemblages in the Gulf of Aqaba are more distinct than previously reported and that reef fish assemblage structuring can occur even within a relatively small semi-enclosed sea. Despite inter-basin assemblage structuring, the overall low abundance of vulnerable fish species is suggestive of overexploitation in both the Gulf of Aqaba and the northern Red Sea of Saudi Arabia. As the region surveyed is currently undergoing large-scale coastal development, the results presented herein aim to guide spatial management and recovery plans for these coral reef systems in relation to this development.