Copper-catalyzed Cycloaddition Research Articles

Ligand Control of Copper-Mediated Cycloadditions of Acetylene to Azides: Chemo- and Regio-Selective Formation of Deutero- and Iodo-Substituted 1,2,3-Triazoles.

The participation of σ-monocopper and σ-bis-copper acetylide in mechanistic pathways for copper-catalyzed cycloaddition (CuAAC) reactions of acetylene with azides was probed by analysis of deuterium distributions in the 1,2,3-triazole product formed by deuterolysis of initially formed mono- and bis-copper triazoles. The results show that, when Cu(Phen)(PPh3)2NO3 is used as the catalyst for reactions of acetylene with azides in DMF/D2O, 1-substituted-5-deutero-1,2,3-triazoles are generated selectively. This finding demonstrates that the Cu(Phen)(PPh3)2NO3-catalyzed cycloadditions utilize monocopper acetylide as the substrate and produce 5-copper-1,2,3-triazoles initially. Conversely, when DBU or Et3N is the copper ligand, the process takes place through initial formation and cycloaddition of bis-copper acetylide to produce 4,5-bis-copper-triazole, which reacts with D2O to form the corresponding 4,5-bis-deutero-triazole. Moreover, when C2D2 is used as the substrate, Cu(Phen)(PPh3)2NO3 as the Cu ligand, and H2O/DMF as the solvent, mono-C4-deutreo 1,2,3-triazoles are generated in high yields and excellent levels of regioselectivity. Lastly, CuAAC reactions of acetylene with azides, promoted by CuCl2·2H2O and NaI, yield 4,5-diiodo-1,2,3-triazoles with moderate to high efficiencies.

One-pot nucleophilic substitution-double click reactions of biazides leading to functionalized bis(1,2,3-triazole) derivatives.

The nucleophilic substitution of benzylic bromides with sodium azide was combined with a subsequent copper-catalyzed (3 + 2) cycloaddition with terminal alkynes. This one-pot process was developed with a simple model alkyne, but then applied to more complex alkynes bearing enantiopure 1,2-oxazinyl substituents. Hence, the precursor compounds 1,2-, 1,3- or 1,4-bis(bromomethyl)benzene furnished geometrically differing bis(1,2,3-triazole) derivatives. The use of tris[(1-benzyl-1H-1,2,3-triazol-4-yl)methyl]amine (TBTA) as ligand for the click step turned out to be very advantageous. The compounds with 1,2-oxazinyl end groups can potentially serve as precursors of divalent carbohydrate mimetics, but the reductive cleavage of the 1,2-oxazine rings to aminopyran moieties did not proceed cleanly with these compounds.

Technetium Complexes with an Isocyano-alkyne Ligand and Its Reaction Products.

The attachment of an ethyne substituent in the para position of phenylisocyanide, CNPhpC≡CH, enables the isocyanide to replace carbonyl ligands in the coordination sphere of common technetium(I) starting materials such as (NBu4)[Tc2(μ-Cl)3(CO)6]. The ligand exchange proceeds under thermal conditions and finally forms the corresponding hexakis(isocyanide)technetium(I) complex. The product undergoes a copper-catalyzed cycloaddition ("Click" reaction), e.g., with benzyl azide, which gives the [Tc(CNPhazole)6]+ cation. The free, uncoordinated "Click" product is obtained from a reaction of the corresponding tetrakis(CNPhazole)copper(I) complex and NaCN. It readily reacts with mer-[Tc(CO)3(tht)(PPh3)2](BF4) (tht = tetrahydrothiophene) under exchange of the thioether ligand. Alternatively, [Cu(CNPhazole)4]+ can be used as a transmetalation reagent for the synthesis of the hexakis(isocyanide)technetium(I) complex, which is the preferable approach for the synthesis of the technetium complex with the short-lived nuclear isomer 99mTc, and a corresponding protocol for [99mTc(CNPhazole)6]+ is reported. The 99Tc and copper complexes have been studied by single-crystal X-ray diffraction and/or spectroscopic methods including IR and multinuclear NMR spectroscopy.

Radiofluorination of an Anionic, Azide-Functionalized Teroligomer by Copper-Catalyzed Azide-Alkyne Cycloaddition.

This study describes the synthesis, radiofluorination and purification of an anionic amphiphilic teroligomer developed as a stabilizer for siRNA-loaded calcium phosphate nanoparticles (CaP-NPs). As the stabilizing amphiphile accumulates on nanoparticle surfaces, the fluorine-18-labeled polymer should enable to track the distribution of the CaP-NPs in brain tumors by positron emission tomography after application by convection-enhanced delivery. At first, an unmodified teroligomer was synthesized with a number average molecular weight of 4550 ± 20 Da by free radical polymerization of a defined composition of methoxy-PEG-monomethacrylate, tetradecyl acrylate and maleic anhydride. Subsequent derivatization of anhydrides with azido-TEG-amine provided an azido-functionalized polymer precursor (o14PEGMA-N3) for radiofluorination. The 18F-labeling was accomplished through the copper-catalyzed cycloaddition of o14PEGMA-N3 with diethylene glycol-alkyne-substituted heteroaromatic prosthetic group [18F]2, which was synthesized with a radiochemical yield (RCY) of about 38% within 60 min using a radiosynthesis module. The 18F-labeled polymer [18F]fluoro-o14PEGMA was obtained after a short reaction time of 2-3 min by using CuSO4/sodium ascorbate at 90 °C. Purification was performed by solid-phase extraction on an anion-exchange cartridge followed by size-exclusion chromatography to obtain [18F]fluoro-o14PEGMA with a high radiochemical purity and an RCY of about 15%.

Imidazo[1,2-a]pyridine-based hybrids. Copper-catalyzed cycloaddition synthesis, photophysics, docking, and interaction studies with biomacromolecules

Herein, we report the connection between imidazo[1,2-a]pyridines with several biologically relevant molecules. The strategy used to build these connections was based on a copper-catalyzed cycloaddition, where different azides and imidazo[1,2-a]pyridine moieties bearing an alkyne were used in this transformation. In total, 8 imidazo[1,2-a]pyridines bearing a terminal alkyne could be synthesized, thus, allowing for the synthesis of 27 new hybrid molecules connected by a triazole ring. In addition 17 imidazo[1,2-a]pyridines connected to either carbohydrate or naturally originated molecules were also prepared. Based on their electronic structure, two examples based on the benzothiazole moiety were selected for fluorescence and binding studies. These compounds show absorption maxima in the UV region, ascribed to 1π-π* electronic transition. The presence of an additional hydroxyl group in one compound allowed a completely different photophysical behavior, where a dual fluorescence emission could be observed, related to the ESIPT process. Spectroscopic studies by UV–Vis, steady-state fluorescence, and molecular docking calculations evidenced the ability of each derivative to establish interactions with CT-DNA and human and bovine serum albumins (HSA, and BSA, respectively). The behavior presented for this new class of compounds makes them a promising tool as optical sensors for biomacromolecules.

3D-Printing of Capsule Devices as Compartmentalization Tools for Supported Reagents in the Search of Antiproliferative Isatins.

The application of high throughput synthesis methodologies in the generation of active pharmaceutical ingredients (APIs) currently requires the use of automated and easily scalable systems, easy dispensing of supported reagents in solution phase organic synthesis (SPOS), and elimination of purification and extraction steps. The recyclability and recoverability of supported reagents and/or catalysts in a rapid and individualized manner is a challenge in the pharmaceutical industry. This objective can be achieved through a suitable compartmentalization of these pulverulent reagents in suitable devices for it. This work deals with the use of customized polypropylene permeable-capsule devices manufactured by 3D printing, using the fused deposition modeling (FDM) technique, adaptable to any type of flask or reactor. The capsules fabricated in this work were easily loaded "in one step" with polymeric reagents for use as scavengers of isocyanides in the work-up process of Ugi multicomponent reactions or as compartmentalized and reusable catalysts in copper-catalyzed cycloadditions (CuAAC) or Heck palladium catalyzed cross-coupling reactions (PCCCRs). The reaction products are different series of diversely substituted isatins, which were tested in cancerous cervical HeLa and murine 3T3 Balb fibroblast cells, obtaining potent antiproliferative activity. This work demonstrates the applicability of 3D printing in chemical processes to obtain anticancer APIs.

Postmodification of highly delocalized cations in an azide-based polymer via copper-catalyzed cycloaddition for anion exchange membranes

Postmodification of highly delocalized cations in an azide-based polymer via copper-catalyzed cycloaddition for anion exchange membranes

Copper-on-Magnetically Activated Carbon-Catalyzed Azide-Alkyne Click Cycloaddition in Water

The copper-catalyzed cycloaddition of alkynes and azides (CuAAC) to give the corresponding 1,4-disubstituted-1,2,3-triazoles is the most successful and leading reaction within the click chemistry regime. Its heterogenization stands out as the innovative strategy to solve its environmental concerns and toxicity issue. In this report, magnetically retrievable activated carbon produced from biomass Persea Americana Nuts was loaded with a catalytically active copper(I) catalyst, resulting into a heterogeneous nanocatalyst, namely Cu-Fe3O4-PAC. This new compound was fully characterized using several techniques such as Powder X-ray diffraction (PXRD), Fourier-transform infrared spectroscopy (FT-IR), Scanning Electron Microscopy (SEM), Energy Dispersive X-ray diffraction (EDX), Brunauer–Emmett–Teller (BET) analysis, and Raman spectroscopy. Cu-Fe3O4-PAC catalyzed the cycloaddition of a variety of substituted terminal alkynes and organic azides in water at room temperature with excellent yields and in a regioselective manner. The hot filtration test demonstrated that no significant leaching of catalytically active copper particles took place during the CuAAC process, a feature that supports the stability of Cu-Fe3O4-PAC and its heterogeneous action way. Cu-Fe3O4-PAC was magnetically separable by applying an external magnetic field and was recyclable up to five runs, with only an 8% decline in its activity after the 5th catalytic test. The hot filtration experiment heavily suggested that the present catalytic system would proceed in a heterogeneous manner in CuAAC. The electronic characteristics, nature of the intermediate complexes, and type of ligand-to-copper bonding interactions were studied by using quantum theory of atoms in molecules (QTAIM) and natural bond orbital (NBO) calculations, which enabled the confirmation of the proposed binuclear mechanism.

Polymer segmental dynamics near the interface of silica particles in the particle/polymer composites

We demonstrate an approach to examine the local segmental dynamics of a polymer near the interface of an inorganic filler by observing the rotational dynamics of the fluorescent probe at the chain ends of polymer brushes grafted onto the surface of the filler particles. Localization of the fluorescent probe was realized by designing and synthesizing fluorophore-tethered polystyrene (PS) brushes anchored on the surface of silica particles of controlled sizes. Fluorophore-functionalized telechelic PS with an azide functionality at the other chain end was achieved via a combination of atom transfer radical polymerization and post-polymerization modification. The azide-bearing PS chains were tethered to alkyne-functionalized particles via copper-catalyzed cycloaddition reaction. The molecular weight of the grafted polymer chains was controlled to be less than the critical entanglement molecular weight, and the chain density was controlled to be low enough so that the observed dynamics was not perturbed by the polymer brush conformation and brush-matrix polymer entanglement. The polymer dynamics near the surface of the particles at low concentrations was closely examined in the bulk film geometry by employing imaging rotational fluorescence correlation microscopy (irFCM). The observed polymer dynamics near the interface were not altered in the inorganic/polymer composite geometry when the surface did not have favorable interaction with the matrix polymer. The presented rational design of the chemical route and examination of local dynamics highlight a feasible approach to construct material systems with high complexities towards a deeper understanding of composite materials.

Copper-Catalyzed Cycloadditions of Diazo Compounds with Imidazolidines/Hexahydropyrimidines for the Syntheses of N-Heterocycles.

Reported herein are the unprecedented copper-catalyzed formal [n + 1]/[n + 3] (n = 5, 6) cycloadditions of diazo compounds with imidazolidines/hexahydropyrimidines, thus providing a general, economical, and efficient route to construct different sized (six- to nine-membered) diaza-heterocycles in moderate to excellent yields under mild reaction conditions. This strategy features the use of copper catalyst to accomplish such diverse annulations and the utilization of imidazolidines/hexahydropyrimidines as stable 1,5-/1,6-dipoles.

Bambus[4,6]urils as Dual Scaffolds for Multivalent Iminosugar Presentation and Ion Transport: Access to Unprecedented Glycosidase-Directed Anion Caging Agents

Bambusurils, BU[4] and BU[6], were used for the first time as multivalent scaffolds to link glycosidases inhibitors derived from 1-deoxynojirimycin (DNJ). Two linear DNJ ligands having six or nine carbon alkyl azido linkers or a trivalent DNJ dendron were grafted onto octapropargylated BU[4] and dodecapropargylated BU[6] using copper-catalyzed cycloaddition (CuAAC) to yield corresponding neoglycobambus[4] and neoglycobambus[6]urils bearing 8 to 24 iminosugars. The inhibition potencies of neoglycoBU[4], neoglycoBU[6] and neoglycoBU[6] caging anions were evaluated against Jack Bean α-mannosidase and compared to monovalent DNJ derivatives. Strong affinity enhancements per inhibitory head were obtained for the clusters holding trivalent dendrons with inhibitory constants in the nanomolar range (Ki = 24 nM for BU[4] with 24 DNJ units). Interestingly, the anion (bromide or iodide) encapsulated inside the cavity of BU[6] does not modify the inhibition potency of neoglycoBU[6], opening the way to water-soluble glycosidase-directed anion caging agents that may find applications in important fields such as bio(in)organic chemistry or oncology.

Halo-seq: An RNA Proximity Labeling Method for the Isolation and Analysis of Subcellular RNA Populations.

The subcellular localization of specific RNA molecules promotes localized cellular activity across a variety of species and cell types. The misregulation of this RNA targeting can result in developmental defects, and mutations in proteins that regulate this process are associated with multiple diseases. For the vast majority of localized RNAs, however, the mechanisms that underlie their subcellular targeting are unknown, partly due to the difficulty associated with profiling and quantifying subcellular RNA populations. To address this challenge, we developed Halo-seq, a proximity labeling technique that can label and profile local RNA content at virtually any subcellular location. Halo-seq relies on a HaloTag fusion protein localized to a subcellular space of interest. Through the use of a radical-producing Halo ligand, RNAs that are near the HaloTag fusion are specifically labeled with spatial and temporal control. Labeled RNA is then specifically biotinylated in vitro via a click reaction, facilitating its purification from a bulk RNA sample using streptavidin beads. The content of the biotinylated RNA is then profiled using high-throughput sequencing. In this article, we describe the experimental and computational procedures for Halo-seq, including important benchmark and quality control steps. By allowing the flexible profiling of a variety of subcellular RNA populations, we envision Halo-seq facilitating the discovery and further study of RNA localization regulatory mechanisms. © 2022 Wiley Periodicals LLC. Basic Protocol 1: Visualization of HaloTag fusion protein localization Basic Protocol 2: In situ copper-catalyzed cycloaddition of fluorophore via click reaction Basic Protocol 3: In vivo RNA alkynylation and extraction of total RNA Basic Protocol 4: In vitro copper-catalyzed cycloaddition of biotin via click reaction Basic Protocol 5: Assessment of RNA biotinylation by RNA dot blot Basic Protocol 6: Enrichment of biotinylated RNA using streptavidin beads and preparation of RNA-seq library Basic Protocol 7: Computational analysis of Halo-seq data.

Synthesis of 4-(1,2,3-triazol-1-yl)-L-phenylalanines

Synthesis of a new structural class of phenylalanine derivatives is described. Azidonation of Boc-L-Phe(4-I)-OMe via copper-ligand catalysis with sodium azide under microwave irradiation followed by regioselective copper-catalyzed azide-terminal alkyne cycloaddition provided new 4-(1,2,3-triazol-1-yl)-L-Phe derivatives. The developed protocol was also successfully employed to synthesize a late-stage modified Phe containing peptide.

Copper-Catalyzed Azide-Alkyne Cycloaddition of Hydrazoic Acid Formed In Situ from Sodium Azide Affords 4-Monosubstituted-1,2,3-Triazoles.

We report a copper-catalyzed cycloaddition of hydrogen azide (hydrazoic acid, HN3) with terminal alkynes to form 4-substituted-1H-1,2,3-triazoles in a sustainable manner. Hydrazoic acid was formed in situ from sodium azide under acidic conditions to react with terminal alkynes in a copper-catalyzed reaction. Using polydentate N-donor chelating ligands and mild organic acids, the reactions were realized to proceed at room temperature under aerobic conditions in a methanol–water mixture and with 5 mol % catalyst loadings to afford 4-substituted-1,2,3-triazoles in high yields. This method is amenable on a wide range of alkyne substrates, including unprotected peptides, showing diverse functional group tolerance. It is applicable for late-stage functionalization synthetic strategies, as demonstrated in the synthesis of the triazole analogue of losartan. The preparation of orthogonally protected azahistidine from Fmoc-l-propargylglycine was realized on a gram scale. The hazardous nature of hydrazoic acid has been diminished as it forms in situ in <6% concentrations at which it is safe to handle. Reactions of distilled solutions of hydrazoic acid indicated its role as a reactive species in the copper-catalyzed reaction.

DESIGN AND SYNTHESIS OF NOVEL PERILLYL-4HPYRANTRIAZOLE DERIVATIVES

We report a set of twelve rationally designed and library of perillyl-4H-pyrantriazole derivatives (6a-6l) through a sequence of a multicomponent reaction followed by copper-catalyzed cycloaddition. The intermediate 4-aryl-4Hpyran (4) was obtained by three-component condensation of 5,5-dimethylcyclohexane-1,3-dione) (1), 4-(prop-2-yn1-yloxy) benzaldehyde (2) and malononitrile (3). To this intermediate, azido benzenes (5) were subjected using copper catalyze cycloaddition to produce perillyl-4H-pyrantriazole derivatives in better to good yields. All compounds were validated by mass, 13C-NMR, FTIR and 1H-NMR spectrometry.

Copper-catalyzed multiple oxidation and cycloaddition of aryl-alkyl ketones (alcohols) for the synthesis of 4-acyl- and 4-diketo-1,2,3-triazoles.

A Cu/TEMPO-catalyzed tandem multiple oxidative dehydrogenation and cycloaddition has been developed, which affords 4-acyl-1,2,3-triazoles and 4-diketo-1,2,3-triazoles from readily-available aryl-alkyl ketones (or alcohols) and different organic azides. Moreover, the reaction used environmentally friendly dimethyl carbonate (DMC) as the solvent and air as the oxidant, and H2O was the only by-product, so it provides a green and practical synthetic method for 1,2,3-triazoles.

Azoacetylenes for the Synthesis of Arylazotriazole Photoswitches.

We report a modular approach toward novel arylazotriazole photoswitches and their photophysical characterization. Addition of lithiated TIPS-acetylene to aryldiazonium tetrafluoroborate salts gives a wide range of azoacetylenes, constituting an underexplored class of stable intermediates. In situ desilylation transiently leads to terminal arylazoacetylenes that undergo copper-catalyzed cycloadditions (CuAAC) with a diverse collection of organoazides. These include complex molecules derived from natural products or drugs, such as colchicine, taxol, tamiflu, and arachidonic acid. The arylazotriazoles display near-quantitative photoisomerization and long thermal Z-half-lives. Using the method, we introduce for the first time the design and synthesis of a diacetylene platform. It permits implementation of consecutive and diversity-oriented approaches linking two different conjugants to independently addressable acetylenes within a common photoswitchable azotriazole. This is showcased in the synthesis of several photoswitchable conjugates, with potential applications as photoPROTACs and biotin conjugates.

Determination of E. coli in water using the enzyme free electrochemical impedimetric immunosensors

In this article, we have shown the results of E. coli bacteria determination in water using the enzyme free electrochemical immunosensor with covalent via click chemistry immobilized receptor layer in comparison with dropwise immobilized antibodies. Covalent immobilization was realized by creating precursors on the surface of the working electrode with the reaction of azide-alkyne copper-catalysed cycloaddition approach. The detection limit of the immunosensor with covalent and dropwise immobilization of antibodies was estimated as 6.6 CFU/ml and 11.2 CFU/ml, respectively, a linear range was 103-106 CFU/ml. Moreover, the sensor with “click” immobilized antibodies showed good stability for 30 days when stored in a phosphate buffer, while the sensor with dropwise immobilized receptor layer was stable for 3 days.

Cover Feature: Base‐Free Copper‐Catalyzed Azide‐Alkyne Click Cycloadditions (CuAAc) in Natural Deep Eutectic Solvents as Green and Catalytic Reaction Media (Eur. J. Org. Chem. 34/2021)

The Cover Feature shows the use of natural deep eutectic solvents (DESs) as catalytic green solvents for the “click” Copper-catalyzed cycloaddition of azides to alkynes (CuAAc) affording 1,2,3-triazoles in excellent yields. These solvents have green properties for their low or absent volatility and toxicity and are formed from natural compounds, therefore they are biocompatible. The DESs revealed their catalytic features due to their reducing properties and their basic behavior thanks to the H-bond network, which makes the use of any base as well as sacrificial reductants superfluous. More information can be found in the Full Paper by S. V. Giofrè, M. Tiecco et al.

Copper-Catalyzed Cycloaddition of Heterobicyclic Alkenes with Diaryl Disulfides to Synthesize Dihydrobenzo[b]thiophene Derivatives.

A novel copper-catalyzed cycloaddition of diaryl disulfides to heterobicyclic alkenes has been developed. The C-S and C-C bonds can be formed simultaneously on the C═C bond of the olefins via a single-step cycloaddition to afford a series of 2,3-dihydrobenzo[b]thiophene derivatives. This reaction exhibits excellent diastereoselectivity and relatively broad substrate scope. Various functional groups attached to the substrates are tolerated in this protocol to give the corresponding exo adducts in moderate yields.