The understanding of mixing-controlled reactive dynamics in heterogeneous porous media remains limited, presenting significant challenges for modeling subsurface contaminant transport processes and for designing cost-effective environmental remedial efforts. The complexity of accurately observing, measuring, and modeling mixing-limited reactive transport has led to inadequate exploration of these critical processes. This study investigates the mixing and reaction kinetics affected by stagnant zones, which are commonly found in alluvial aquifers-aquitards and fracture-matrix systems. By conducting experiments involving conservative and bimolecular reactive transport through porous media within translucent chambers filled with two sizes of glass beads and under varying flow rates, we explored the effects of grain size and hydrodynamic conditions. Using a high-resolution camera, we monitored the concentration changes of conservative and reactive tracers, with subsequent interpretation through three-dimensional numerical simulations. The outcomes revealed the emergence of distinct mixing interfaces within both mobile and stagnant zones, culminating in a bi-peaked plume formation. Notably, the mixing and reaction times in media containing stagnant zones were found to be approximately 10 times longer than in homogeneous media. These findings, through experimental and modeling efforts, advance our understanding of mixing-limited reactive transport phenomena within heterogeneous media, underscoring the significant role of stagnant zones—a topic previously underexplored.