Comprehensive Web-based System Research Articles

Excellence in Health Care NIRAMAY HOSPITAL

Abstract — “Excellence In Health Care: A Case Study of Niramay Hospital showcases the transformative impact of technology in healthcare management. In response to the growing demands for efficient patient care and resource optimization, Niramay Hospital embarked on the Excellence In Health Care project. Leveraging HTML, CSS, and SQL, a comprehensive web-based system was developed to streamline patient management, enhance staff productivity, and improve overall healthcare delivery. Through the systematic integration of these technologies, Niramay Hospital witnessed remarkable improvements in patient satisfaction, operational efficiency, and resource allocation. This abstract encapsulates the methodology, key outcomes, and significance of the project, underscoring the pivotal role of technology in driving healthcare innovation and excellence.” Keywords— Web-Based Application.

A comprehensive web-based system for flood inundation map generation and comparative analysis based on height above nearest drainage

It is critical to obtain accurate flood extent predictions in a timely manner in order to reduce flood-related casualties and economic losses from floods with greater magnitudes and fall outside the handling capacity of our existing mitigation systems. Running a real-time flood inundation mapping model is helpful in supporting quick response decisions for unplanned floods, such as how to distribute limited resources and labor so that the most flood-prone areas receive adequate mitigation efforts and how to execute evacuations that keep people safe while causing the least amount of unneeded disruption. Most inundation systems, on the other hand, are either overly demanding in terms of data and computing power or have limited interaction and customization with various input and model configurations. This paper describes a client-side web-based real-time inundation mapping system based on the Height Above the Nearest Drainage (HAND) model. The system includes tools for hydro-conditioning terrain data, modifying terrain data, custom inundation mapping, online model performance evaluation, and hydro-spatial analyses. Instead of only being able to work on a few preprocessed datasets, the system is ready to run in any region of the world with limited data needs (i.e., elevation). With the system's multi-depth inundation mapping approach, we can use water depth measurements (sensor-based or crowdsourced) or model predictions to generate more accurate flood inundation maps based on current or future conditions. All of the system's functions can be performed entirely through a client-side web browser, without the need for GIS software or server-side computing. For decision-makers and the general public with limited technical backgrounds, the system provides a one-stop, easy-to-use flood inundation modeling and analysis tool.

Scheduling Crash Tests at Ford Motor Company

We consider the problem of scheduling crash tests for new vehicle programs at Ford. We describe the development of a comprehensive web-based system that automates time-consuming scheduling analyses through mathematical optimization, while also institutionalizing expert knowledge about the engineering complexities of crash testing. We present a novel integer programming model and a corresponding solution algorithm that quickly generates efficient schedules. The system’s user interface enables engineers to specify key program data and consider multiple scheduling scenarios, while using the underlying optimization model and solution algorithms as a black box.

Abstract B1-05: R2: Accessible web-based genomics analysis and visualization platform for biomedical researchers

Abstract In this era of explosive high throughput (HT) genomics data generation, there is a growing need for accessible software solutions that can help unlock biological/clinical characteristics from such data. With the biomedical researcher (with limited or no bioinformatics skills) in mind, we developed a comprehensive web-based system called R2 (http://r2.amc.nl). R2 aids in the analysis and visualization of private/shielded as well as public high throughput data and their associated annotated features. The R2 platform consists of a database storing both publicly accessible as well as shielded datasets with unified gene annotation, supplemented with a large suite of tools that can be used on these data, and their associated annotation. As such the user experiences the same look & feel throughout the mining process. In the public section, R2 hosts over 60,000 HT samples. Next to gene expression (microarray and RNA-seq), the platform is also being employed in the integration, analysis and visualization of other data types, such as aCGH, SNP, ChIP, methylation, miRNA, and NGS whole genome sequencing information. R2 contains an expanding set of interactive analyses which are heavily inter-connected, allowing users to quickly hop from one view (representation of the data) to another. Analyses include, correlation, differential expression, gene sets, gene ontology, transcription factor binding sites, PCA, kmeans, Kaplan Meier scans, signature creation etc. Visualizations include, various gene oriented plots, heatmaps, circos, embedded genome browser, Venn, etc. Many parts of the R2 platform are publicly accessible through the http://r2.amc.nl portal. The R2 gene expression analysis tools have thus far been used in more than 180 peer-reviewed scientific publications including journals as Nature, Nature Genetics and Cell. R2 also supports restricted / shielded use and is used in many (inter)national collaborative efforts involving unpublished datasets. The webservers have been serving over 900.000 pages over the past 12 months (Nov 2014). Citation Format: Jan Koster, Jan J. Molenaar, Rogier Versteeg. R2: Accessible web-based genomics analysis and visualization platform for biomedical researchers. [abstract]. In: Proceedings of the AACR Special Conference on Computational and Systems Biology of Cancer; Feb 8-11 2015; San Francisco, CA. Philadelphia (PA): AACR; Cancer Res 2015;75(22 Suppl 2):Abstract nr B1-05.

Abstract A2-45: R2: Accessible web-based genomics analysis and visualization platform for biomedical researchers

Abstract In this era of explosive high throughput (HT) genomics data generation, there is a growing need for accessible software solutions that can help unlock biological/clinical characteristics from such data. With the biomedical researcher (with limited or no bioinformatics skills) in mind, we developed a comprehensive web-based system called R2 (http://r2.amc.nl). R2 aids in the analysis and visualization of private/shielded as well as public high throughput data and their associated annotated features. The R2 platform consists of a database storing both publicly accessible as well as shielded datasets with unified gene annotation, supplemented with a large suite of tools that can be used on these data, and their associated annotation. As such the user experiences the same look & feel throughout the mining process. In the public section, R2 hosts over 60,000 HT samples. Next to gene expression (microarray and RNA-seq), the platform is also being employed in the integration, analysis and visualization of other data types, such as aCGH, SNP, ChIP, methylation, miRNA, and NGS whole genome sequencing information. R2 contains an expanding set of interactive analyses which are heavily inter-connected, allowing users to quickly hop from one view (representation of the data) to another. Analyses include, correlation, differential expression, gene sets, gene ontology, transcription factor binding sites, PCA, kmeans, Kaplan Meier scans, signature creation etc. Visualizations include, various gene oriented plots, heatmaps, circos, embedded genome browser, Venn, etc. Many parts of the R2 platform are publicly accessible through the http://r2.amc.nl portal. The R2 gene expression analysis tools have thus far been used in more than 180 peer-reviewed scientific publications including journals as Nature, Nature Genetics and Cell. R2 also supports restricted / shielded use and is used in many (inter)national collaborative efforts involving unpublished datasets. The webservers have been serving over 900.000 pages over the past 12 months (Nov 2014). Citation Format: Jan Koster, Jan J. Molenaar, Rogier Versteeg. R2: Accessible web-based genomics analysis and visualization platform for biomedical researchers. [abstract]. In: Proceedings of the AACR Special Conference on Translation of the Cancer Genome; Feb 7-9, 2015; San Francisco, CA. Philadelphia (PA): AACR; Cancer Res 2015;75(22 Suppl 1):Abstract nr A2-45.

CLARA: an integrated clinical research administration system.

Administration of human subject research is complex, involving not only the institutional review board but also many other regulatory and compliance entities within a research enterprise. Its efficiency has a direct and substantial impact on the conduct and management of clinical research. In this paper, we report on the Clinical Research Administration (CLARA) platform developed at the University of Arkansas for Medical Sciences. CLARA is a comprehensive web-based system that can streamline research administrative tasks such as submissions, reviews, and approval processes for both investigators and different review committees on a single integrated platform. CLARA not only helps investigators to meet regulatory requirements but also provides tools for managing other clinical research activities including budgeting, contracting, and participant schedule planning.

Professional and Personal Development in Contemporary Gerontology Doctoral Education

This article reports on the Gerontology Doctoral Student Assessment Model (GDSAM), a comprehensive web-based system premised on developing an evaluation mechanism attuned to the special requirements of advanced graduate education at the doctoral level. The system focuses on longitudinal tracking of selected dimensions of intellectual, professional, and personal progress. This involves interlocking elements of online personal dossier development, student self-rating assessment, faculty assessment of student progress, and a means of communicating interactive and iterative feedback among students and faculty. Preliminary findings from initial data collection using the assessment system indicate that students who have completed and passed their qualifying examinations are more confident in their ability to articulate diverse ideas in professional settings, work in direct contact with research participants, present research findings to scientific audiences, and adjust to the rigors of doctoral education. Additional feedback from participants in the system suggests that, although important ethical issues of confidentiality and appropriate use must be recognized and monitored, the GDSAM has strong potential to provide an appropriate assessment tool at the doctoral level. Implementation of such a system throughout doctoral education in gerontology provides a unique opportunity for tracking the impact and effectiveness of doctoral education in an emergent field as additional programs come on line.

Bringing Modeling to the Masses: A Web Based System to Predict Potential Species Distributions

Predicting current and potential species distributions and abundance is critical for managing invasive species, preserving threatened and endangered species, and conserving native species and habitats. Accurate predictive models are needed at local, regional, and national scales to guide field surveys, improve monitoring, and set priorities for conservation and restoration. Modeling capabilities, however, are often limited by access to software and environmental data required for predictions. To address these needs, we built a comprehensive web-based system that: (1) maintains a large database of field data; (2) provides access to field data and a wealth of environmental data; (3) accesses values in rasters representing environmental characteristics; (4) runs statistical spatial models; and (5) creates maps that predict the potential species distribution. The system is available online at www.niiss.org, and provides web-based tools for stakeholders to create potential species distribution models and maps under current and future climate scenarios.

New internet-based systems for management of sponsored research and conferences: a contribution towards e-governance in India

There is an increasing interest in e-governance for better reachability of government services to citizens. This paper is on our efforts to automate a key activity of the science and technology department of the government of India. In particular, we present the design and development of a comprehensive Web-based system for inviting and processing research proposals. The architecture presented is generic in that extensions to multiple applications such as conference and event management are straightforward. We present the challenges in the automation process, discuss prior work, and then present novel aspects of our system. The system is based on PHP and MySQL.

An online database for brain disease research

BackgroundThe Stanley Medical Research Institute online genomics database (SMRIDB) is a comprehensive web-based system for understanding the genetic effects of human brain disease (i.e. bipolar, schizophrenia, and depression). This database contains fully annotated clinical metadata and gene expression patterns generated within 12 controlled studies across 6 different microarray platforms.DescriptionA thorough collection of gene expression summaries are provided, inclusive of patient demographics, disease subclasses, regulated biological pathways, and functional classifications.ConclusionThe combination of database content, structure, and query speed offers researchers an efficient tool for data mining of brain disease complete with information such as: cross-platform comparisons, biomarkers elucidation for target discovery, and lifestyle/demographic associations to brain diseases.

ASAP: a resource for annotating, curating, comparing, and disseminating genomic data

ASAP is a comprehensive web-based system for community genome annotation and analysis. ASAP is being used for a large-scale effort to augment and curate annotations for genomes of enterobacterial pathogens and for additional genome sequences. New tools, such as the genome alignment program Mauve, have been incorporated into ASAP in order to improve display and analysis of related genomes. Recent improvements to the database and challenges for future development of the system are discussed. ASAP is available on the web at .