Components Of Species Diversity Research Articles

Species richness and evenness of European bird communities show differentiated responses to measures of productivity.

Understanding patterns of species diversity is crucial for ecological research and conservation, and this understanding may be improved by studying patterns in the two components of species diversity, species richness and evenness of abundance of species. Variation in species richness and evenness has previously been linked to variation in total abundance of communities as well as productivity gradients. Exploring both components of species diversity is essential because these components could be unrelated or driven by different mechanisms. The aim of this study was to investigate the relationship between species richness and evenness in European bird communities along an extensive latitudinal gradient. We examined their relationships with latitude and Net Primary Productivity, which determines energy and matter availability for heterotrophs, as well as their responses to territory densities (i.e. the number of territories per area) and community biomass (i.e. the bird biomass per area). We applied a multivariate Poisson log-normal distribution to unique long-term, high-quality time-series data, allowing us to estimate species richness of the community as well as the variance of this distribution, which acts as an inverse measure of evenness. Evenness in the distribution of abundance of species in the community was independent of species richness. Species richness increased with increasing community biomass, as well as with increasing density. Since both measures of abundance were explained by NPP, species richness was partially explained by energy-diversity theory (i.e. the more energy, the more species sustained by the ecosystem). However, species richness did not increase linearly with NPP but rather showed a unimodal relationship. Evenness was not explained either by productivity nor by any of the aspects of community abundance. This study highlights the importance of considering both richness and evenness to gain a better understanding of variation in species diversity. We encourage the study of both components of species diversity in future studies, as well as use of simulation studies to verify observed patterns between richness and evenness.

Differential patterns of taxonomic and functional diversity for two groups of canopy arthropods across spatial scales

AbstractArthropod diversity is often linked to variation in resource use, dispersal ability, habitat connectivity, and climate factors that differ across spatial scales. The aim of this research was to examine how species richness, functional diversity, and community composition of two taxa differing in functional roles and dispersal ability are structured across spatial scales and to identify the importance of vegetation, climate, and landscape in explaining these patterns at different scales. Organisms were collected from tree canopies using insecticidal fogging in the summer of 2000 from 96 trees in 24 stands of 6 deciduous forest sites in 2 ecoregions of the eastern United States. Taxonomic and functional beta diversity of ants (Hymenoptera: Formicidae) and spiders (Araneae) were partitioned across four hierarchical spatial scales (individual tree, forest stand, site, and ecoregion). The contributions of climatic, landscape, and vegetation variables were determined using model selection. Ant and spider species richness, functional diversity, and community composition differed between taxa and across spatial scales. Alpha diversity (within trees) was lower than expected for both taxa and types of diversity, with host tree species supporting different species of ants and spiders. While the beta components of species diversity among trees and forest stands were greater than expected for both taxa, spiders also showed significant levels of beta diversity among sites. Functional beta diversity was less scale‐dependent than taxonomic beta diversity. Stand‐level patterns of beta diversity were significantly predicted by variation in climate and landscape connectivity. The effects of climate and landscape fragmentation on the diversity and community structure of both taxa indicate that anthropogenic climate change and land use change will alter canopy arthropod communities. Results also suggest that patterns of diversity among fragmentation metrics are influenced by differences in dispersal ability.

Going beyond richness: Modelling the BEF relationship using species identity, evenness, richness and species interactions via the DImodels R package

Abstract Biodiversity and ecosystem function (BEF) studies aim to understand how ecosystems respond to a gradient of species diversity. Generalised Diversity‐Interactions (DI) models are suitable for analysing the BEF relationship. These models relate an ecosystem function response of a community to the identity of the species in the community, their evenness (proportions) and interactions. The number of species in the community (richness) is included implicitly in a DI model. It is common in BEF studies to model an ecosystem function as a function of richness; while this can uncover trends in the BEF relationship, by definition, species diversity is broader than richness alone, and important patterns in the BEF relationship may remain hidden. Here, we introduce the DImodels R package for implementing DI models. We show how richness is mathematically equivalent to a simplified DI model under certain conditions, and illustrate how using the DI multidimensional definition of species diversity can provide deeper insight to the BEF relationship compared to traditional approaches. Using DI models can lead to considerably improved model fit over other methods; it does this by incorporating variation due to the multiple facets of species diversity. Predicting from a DI model is not limited to the study design points, the model can interpolate or extrapolate to predict for any species composition and proportions (assuming there is sufficient coverage of this space in the study design). Expressing the BEF relationship as a function of richness alone can be useful to capture overall trends. However, collapsing the multiple dimensions of species diversity to a single dimension (such as richness) can result in valuable ecological information being lost. DI modelling provides a framework to test the multiple components of species diversity in the BEF relationship. It facilitates uncovering a deeper ecological understanding of the BEF relationship and can lead to enhanced inference. The open‐source DImodels R package provides a user‐friendly way to implement this modelling approach.

Effects of single tree selection cutting on vascular plant species diversity components in temperate forests of Hyrcanian region

Temperate forests in northern Iran are one of the most important natural ecosystems with the highest economic value and a key role in the conservation of forest biodiversity in Iran. We studied vascular plant species diversity components (alpha, beta and gamma) of herb and tree layers on 120 plots at six sites in forests managed by single tree selection and forests that have been left unmanaged for more than 30 years in the Hyrcanian forest zone in northern Iran. Generalized linear mixed models (GLMM) were used to analyse the effect of management on stand properties, tree and herb layer local diversity and soil characteristics. Despite the differences in herb layer local α-diversity, forest management did affect neither community composition of the herb layer nor regional γ-diversity. Also, species richness as well as α- and γ-diversity of the tree layer was significantly higher in managed forests, while β-diversity showed no directional response across herb and tree layers. According to constrained ordination analysis, main drivers for explaining variance in plant species composition were soil organic matter, total nitrogen, potassium, phosphorous, pH and forest structural variables (basal area, number of trees per hectare and canopy cover) in herb and tree layers. We found that in Hyrcanian forests single tree selection management promotes environmental conditions that effectively contribute to increased diversity of the herb and tree layers at the local and regional scale compared to unmanaged forests. The higher diversity of herb and tree layers is likely being driven by higher within-stand heterogeneity, improved light availability in managed forests due to lower stocking density and larger canopy gaps, or also results from topsoil disturbances through wood extraction. This study indicated that single tree selection system has the potential to be used in order to improve biodiversity conservation, and these results can be useful for development of management guidelines and decision-making processes.Because it may not be specific enough to dismiss or prioritize forest management regimes, based only on their impact on plant diversity, further assessments of forest management effects on other crucial factors (such as fauna diversity, structural diversity and forest ecosystems services) are needed.

Responses of Urban Bird Assemblages to Land-Sparing and Land-Sharing Development Styles in Two Argentinian Cities

Urbanization negatively affects biodiversity worldwide. Consequently, alternative urban development styles are required for an eco-friendlier urbanization process. Thus, two development styles have been suggested: land-sharing (buildings mixed with dispersed green space) and land-sparing (buildings interspersed with large green patches). We assessed differences in species diversity and composition of bird assemblages between both development styles in two Argentinian cities: Santa Fe and Buenos Aires. We surveyed birds in land-sharing and land-sparing areas during the breeding and non-breeding seasons. As a control, we also surveyed birds in areas dominated by impervious surfaces. At a local scale, we also measured the environmental noise and pedestrian traffic. At a landscape scale, we measured the percent vegetation cover surrounding development styles and their distance to the main river. In Buenos Aires, species richness was higher in land-sparing than in land-sharing. However, the Shannon diversity and Simpson diversity were higher in land-sharing. In Santa Fe, both urban development styles supported similar species richness and diversity. Species composition varied between land-sharing and land-sparing in both cities during the breeding season. The pedestrian traffic was negatively associated with species diversity. Therefore, both development styles and strategies to reduce pedestrian traffic should be taken into account to enhance different components of species diversity and composition within the urban matrix.

Spiders indicate delivery of an agri-environment scheme at multiple diversity levels

Agri-environment schemes (AES) are expected to counteract the negative impacts of intensive agriculture on biodiversity. These schemes were specifically designed to target farmland biodiversity and included, for instance, ecological focus areas (EFAs). In Switzerland, in order to qualify for direct payments, farmers must manage 7% or more of their land as biodiversity promotion areas (BPAs). BPAs encompass extensively managed and low intensity hay meadows, fallows (wildflower strips), traditional orchards with high-stem trees and hedgerows. Evaluation of AES delivery for biodiversity is of crucial importance but must be performed across several years and considering the various components of species diversity to avoid incomplete or wrong conclusions. From a complex study design comprising 478 fields in three regions and sampling over 7 years with four sampling times, spider assemblages of BPA habitats were compared to corresponding conventionally managed fields. A battery of investigations was performed including alpha- and beta-diversity analysis, multivariate dispersion, indicator species and species specificity to understand what BPAs deliver for spiders in the habitat scale and farming landscape. Results showed that alpha-diversity (average number of species) was usually higher in BPA habitats than in conventionally managed fields but the species composition (beta-diversity) had more power to perceive AES impact. Furthermore, the various environmental conditions of BPAs in the farming landscape led to highly diverse spider assemblages (multivariate dispersion) emphasizing that not only the agricultural management plays a role in determining species diversity but the environmental heterogeneity. Indicator (and rare) species were mostly found in woody BPAs (hedges and high-stem tree orchards) revealing the high importance of these BPA habitats for spider conservation. At regional scale, BPA hedges contributed most to the regional diversity of spiders in grassland and mixed regions while BPA meadows and wildflower strip BPAs were first delivering in the region of arable crops. Recommendations highlight the role of the woody habitats and of the environmental heterogeneity in the farming landscape as well as of regional planning to make AES effective.

Spatial Heterogeneity of Root Water Conduction Strategies of Zygophyllaceae Plants in Arid Regions of China.

Simple SummaryDesert plants are the main body of species diversity in desert ecosystems and often employ different strategies to adapt to their surrounding environment. In this study, the water conduction strategies of Zygophyllaceae plants along the drought gradient were discussed by dissecting the roots of Zygophyllaceae plants based on their vessel characteristic parameters. The results show that: (1) With the aggravation of drought stress, the water use strategy of Zygophyllaceae plants’ roots changed from safety priority to efficiency priority. (2) The root age of Zygophyllaceae plants increased with temperature, and the growth rate showed a downward trend. (3) Altitude mainly influenced plant growth by affecting the temperature and precipitation of arid habitats. The root xylem anatomical characteristics and life history strategies of Zygophyllaceae plants elaborated in the present study may provide a scientific basis for the ecological restoration of vegetation in arid and semi-arid areas of China.Desert plants are the main component of species diversity in desert ecosystems, and studying the anatomy and function of desert plant xylem is of great significance for understanding climate sensitivity and adaptation mechanisms to arid ecosystems. In this study, 11 sampling points were selected in the region starting from the Loess Plateau to the Jungar Basin, the taproot anatomy materials of 9 samples of Zygophyllaceae plants were collected, and the water conduction strategies and spatial distribution characteristics of these species were analyzed. The age, growth rate, vessel number, vessel fraction, vessel area within a fixed measurement range (TVA), MVA, water conductivity (TKp, MKp) and vessel diameter ranged between 1 and 27 years, 43.67 and 678.10 μm/year, 20 and 1952, 4.43 and 26.58%, 8009.62 and 192069.12 μm², 27.63 and 2164.33 μm², 0.417 and 364.97 kg m−1 MPa−1 s−1, 0.000624 and 7.60 kg m−1 Mpa−1 s−1, and 5.57 and 73.87 μm, respectively. The number of root vessels (R = 0.27, p > 0.05) of Zygophyllaceae plants decreased with the decrease in precipitation, and the average vessel area (R = −0.28, p > 0.05) and hydraulic diameter (R = −0.29, p > 0.05) showed an upward trend. This shows that the water hydraulic efficiency priority strategy may be adopted in the root system of Zygophyllaceae plants in severe drought stress condition, and the water hydraulic safety priority strategy may be used in mild drought stress conditions. With the increase in temperature, the root age of Zygophyllaceae plants showed an increasing trend, and the growth rate showed a downward trend, indicating that the radial growth of the roots of Zygophyllaceae plants is mainly affected by temperature. Altitude influences plant growth by affecting temperature and precipitation in arid habitats. The findings of the present study on root xylem anatomical characteristics and life history strategies provides a scientific basis for the ecological restoration of vegetation in arid and semi-arid areas of China.

Riverine barrier and aridity effects on taxonomic, phylogenetic and functional diversities of lizard assemblages from a semi‐arid region

AbstractAimDisentangling historical and ecological effects on different components of species diversity is key to understanding the assembly and maintenance of communities over space and time. Historical factors may be stronger predictors of the community composition at regional scales, while ecological factors may be more important predictors at local scales. Here, we evaluate multiple biodiversity dimensions to investigate riverine barrier and aridity effects on the assembly and structure of lizard assemblages.LocationSemi‐arid region of northeastern Brazil.TaxonLacertilia (lizards).MethodsWe used data describing 63 lizard assemblages from Caatinga habitats to investigate the effects of a riverine barrier and eight environmental gradients on estimates of taxonomic, phylogenetic and functional diversity. At the regional scale, we compared communities between the banks of the SFr, assuming that differences could emerge from regionally interrupted dispersal in some of the sampled species. At local scales, we evaluated the patterns of phylogenetic and functional structure of the lizard assemblages from Caatinga, and investigated the influence of aridity‐related gradients on species richness, taxonomic, phylogenetic and functional diversity.ResultsLizard assemblages were regionally structured by the SFr acting as a barrier to 47% of the species sampled. We detected phylogenetic signal in 88% of the functional traits. Lizard assemblages were phylogenetic and functionally overdispersed. Moreover, we detected evidence of aridity gradients intensifying the overdispersion of phylogenies and functional traits.Main conclusionsLizard assemblages showed high variation at both regional and local scales. Riverine barriers played a stronger role as a historical factor structuring assemblages on a regional scale. The interaction of historical constraints with competition enhanced by aridity on a local scale may play a role in structuring lizard assemblages across multiple scales.

Mass-ratio and complementarity effects simultaneously drive aboveground biomass in temperate Quercus forests through stand structure.

Forests play a key role in regulating the global carbon cycle, a substantial portion of which is stored in aboveground biomass (AGB). It is well understood that biodiversity can increase the biomass through complementarity and mass‐ratio effects, and the contribution of environmental factors and stand structure attributes to AGB was also observed. However, the relative influence of these factors in determining the AGB of Quercus forests remains poorly understood. Using a large dataset retrieved from 523 permanent forest inventory plots across Northeast China, we examined the effects of integrated multiple tree species diversity components (i.e., species richness, functional, and phylogenetic diversity), functional traits composition, environmental factors (climate and soil), stand age, and structure attributes (stand density, tree size diversity) on AGB based on structural equation models. We found that species richness and phylogenetic diversity both were not correlated with AGB. However, functional diversity positively affected AGB via an indirect effect in line with the complementarity effect. Moreover, the community‐weighted mean of specific leaf area and height increased AGB directly and indirectly, respectively; demonstrating the mass‐ratio effect. Furthermore, stand age, density, and tree size diversity were more important modulators of AGB than biodiversity. Our study highlights that biodiversity–AGB interaction is dependent on the regulation of stand structure that can be even more important for maintaining high biomass than biodiversity in temperate Quercus forests.

Investigating the Relationship between Tree Species Diversity and Landsat-8 Spectral Heterogeneity across Multiple Phenological Stages

The emergence of the spectral variation hypothesis (SVH) has gained widespread attention in the remote sensing community as a method for deriving biodiversity information from remotely sensed data. SVH states that spectral heterogeneity on remotely sensed imagery reflects environmental heterogeneity, which in turn is associated with high species diversity and, therefore, could be useful for characterizing landscape biodiversity. However, the effect of phenology has received relatively less attention despite being an important variable influencing plant species spectral responses. The study investigated (i) the effect of phenology on the relationship between spectral heterogeneity and plant species diversity and (ii) explored spectral angle mapper (SAM), the coefficient of variation (CV) and their interaction effect in estimating species diversity. Stratified random sampling was adopted to survey all tree species with a diameter at breast height of > 10 cm in 90 × 90 m plots distributed throughout the study site. Tree species diversity was quantified by the Shannon diversity index (H′), Simpson index of diversity (D2) and species richness (S). SAM and CV were employed on Landsat-8 data to compute spectral heterogeneity. The study applied linear regression models to investigate the relationship between spectral heterogeneity metrics and species diversity indices across four phenological stages. The results showed that the end of the growing season was the most ideal phenological stage for estimating species diversity, following the SVH concept. During this period, SAM and species diversity indices (S, H′, D2) had an r2 of 0.14, 0.24, and 0.20, respectively, while CV had an r2 of 0.22, 0.22, and 0.25, respectively. The interaction of SAM and CV improved the relationship between the spectral data and H′ and D2 (from r2 of 0.24 and 0.25 to r2 of 0.32 and 0.28, respectively) at the end of the growing season. The two spectral heterogeneity metrics showed differential sensitivity to components of plant diversity. SAM had a high relationship with H′ followed by D2 and then a lower relationship with S throughout the different phenological stages. Meanwhile, CV had a higher relationship with D2 than other plant diversity indices and its relationship with S and H′ remained similar. Although the coefficient of determination was comparatively low, the relationship between spectral heterogeneity metrics and species diversity indices was statistically significant (p < 0.05) and this supports the assertion that SVH could be implemented to characterize plant species diversity. Importantly, the application of SVH should consider (i) the choice of spectral heterogeneity metric in line with the purpose of the SVH application since these metrics relate to components of species diversity differently and (ii) vegetation phenology, which affects the relationship that spectral heterogeneity has with plant species diversity.

Detecting turnover among complex communities using null models: a case study with sky-island haemosporidian parasites.

Turnover in species composition between sites, or beta diversity, is a critical component of species diversity that is typically influenced by geography, environment, and biotic interactions. Quantifying turnover is particularly challenging, however, in multi-host, multi-parasite assemblages where undersampling is unavoidable, resulting in inflated estimates of turnover and uncertainty about its spatial scale. We developed and implemented a framework using null models to test for community turnover in avian haemosporidian communities of three sky islands in the southwestern United States. We screened 776 birds for haemosporidian parasites from three genera (Parahaemoproteus, Plasmodium, and Leucocytozoon) by amplifying and sequencing a mitochondrial DNA barcode. We detected infections in 280 birds (36.1%), sequenced 357 infections, and found a total of 99 parasite haplotypes. When compared to communities simulated from a regional pool, we observed more unique, single-mountain haplotypes and fewer haplotypes shared among three mountain ranges than expected, indicating that haemosporidian communities differ to some degree among adjacent mountain ranges. These results were robust even after pruning datasets to include only identical sets of host species, and they were consistent for two of the three haemosporidian genera. The two more distant mountain ranges were more similar to each other than the one located centrally, suggesting that the differences we detected were due to stochastic colonization-extirpation dynamics. These results demonstrate that avian haemosporidian communities of temperate-zone forests differ on relatively fine spatial scales between adjacent sky islands. Null models are essential tools for testing the spatial scale of turnover in complex, undersampled, and poorly known systems.

Integration of α, β and γ components of macroinvertebrate taxonomic and functional diversity to measure of impacts of commercial sand dredging.

Effects of commercial sand mining on aquatic diversity are of increasing global concern, especially in parts of some developing countries. However, understanding of this activity on the diversity of macroinvertebrates remains focused on the α component of species diversity, rather than community functioning. Thus, there remains much uncertainty regarding how each component of taxonomic (TD) and functional (FD) diversity respond to the activity both in freshwater and marine environments. Here, we assessed the effect of sand dredging on α, β and γ components of TD and FD during different dredging periods based on the response of macroinvertebrate communities over 4 years in the second largest freshwater lake in China. After three years of active dredging, substantial reductions in each component (α, β and γ) of TD and FD were observed within the dredged area. Moreover, after one year of natural recovery, a distinct restoration was observed with an obvious return in multiple facets of TD and FD indices. No such changes were observed within the adjacent and reference areas. Decreases in the multiple components of TD and FD within the dredged area were most likely associated with the direct extraction of substrate and associated benthic fauna and indirect variations of the water and sediment environment (e.g., increases in water depth and decreases in %Clay). Furthermore, dispersal processes and mass effects mainly contributed to the maintenance of TD and FD during the dredged and recovery stages. In addition, the fast recovery of TD and FD was also related to the simple taxonomic structure and highly connected nature of the study area. Our results suggest that a more precise experimental design (BACI) should be pursued to avoid potentially confounding effects (e.g., natural disturbance) because the sensitivity of diversity indices depends upon different experimental designs. Moreover, measurement of the impacts of sand dredging on macroinvertebrate diversity can be undertaken within a rigorous framework for better understanding the patterns and processes of each component of TD and FD under the sand dredging disturbance.

Assembly patterns of tree seedling communities in a human‐dominated Tropical landscape

AbstractUnderstanding how different components of species diversity of regenerating areas respond to both time of abandonment and landscape metrics may offer crucial information for both theoretical and practical purposes. Using 15 regeneration areas (from 4 to 30 years) and nine areas of mature forest, we assessed how tree seedling assemblage responds to time of abandonment and forest cover in terms of species diversity and taxonomic composition. We found that species diversity of seedlings responded positively to time of abandonment, but was not influence by forest cover. Diversity of rare and common species (0D and 1D, respectively) but not dominant species (2D) increased with time of abandonment, reaching reference values very quickly (ca. 20 years). However, species composition seemed to respond to both ageing of forest stand and landscape structure represented by forest cover. Our findings reinforce that in human‐dominated landscapes, local processes related to recovery with time should be more important for plant community assembly than landscape structure, leading to a number of possibilities for multiple successional pathways.Abstract in Portuguese is available with online material.

Distribution of woody species richness in Kurucuova Region according to environmental factors

Bu çalışmada Kurucuova Yöresi’nde odunsu tür zenginliğinin yetişme ortamı faktörlerine göre dağılımı incelenmiştir. Çalışmamızda ilk olarak arazi çalışmaları yapılmış ve bitki türleri ile çevresel değişkenler kaydedilmiştir. Ardından büro ortamında veri girdileri yapıldıktan sonra çeşitli analiz yöntemleri uygulanmıştır. Analizler sırasında ilk olarak vejetasyon grupları ile alfa çeşitliliği arasındaki ilişkiler incelenmiştir. Ardından tür çeşitlilik bileşenleri ile çevresel değişkenler arasında ilişki spearman sıralı korelasyon analizi ile incelenmiştir. Daha sonra modelleme çalışmalarına geçilmiştir. Modelleme çalışmaları regresyon ağacı yöntemiyle yapılmıştır. Arazi envanteri sonucunda 70 örnekleme alanından temin edilen araştırma verileri ile çeşitlilik bileşenleri hesaplanmıştır. Toplamda 35 bitki türü envantere kaydedilmiştir. Alfa çeşitlilik bileşenleri içerisinde Shannon-Wiener indisinin en önemli sonucu verdiği belirlenmiştir. Vejetasyon grupları ile alfa çeşitliliği arasındaki ilişkiler sonucunda 3 farklı grup ayrımı elde edilmiş (A,B,C) A ve C ayrım grubuyla çeşitliliğin pozitif, B ayrım grubuyla ise negatif ilişki gösterdiği belirlenmiştir. Tür çeşitlilik bileşenleri ile çevresel değişkenler arasında ilişki sonucunda yüzey taşlılığı ve yükselti değişkenleri en önemli ilişkiyi göstermiştir. Modelleme sonuçların da ise yükselti ve sıcaklık indeksi değerlerinin en önemli sonuçları verdiği belirlenmiştir.

Dynamic and diverse amphibian assemblages: Can we differentiate natural processes from human induced changes?

Amphibians are sensitive to anthropogenic habitat alterations but also respond to natural drivers of assemblage composition at many levels. Additionally, they are usually hard to detect in field inventories. We used a multiscale approach, from microhabitat to the landscape levels, to try to understand the effects of natural changes, and try to distinguish them from the effects of landscape level anthropogenic changes, on dynamic and diverse anuran assemblages, taking imperfect detection into account. We conducted thorough field inventories in 16 streams at Serra do Cipó, in the southern portion of Espinhaço Mountain Range, southeastern Brazil, during two time periods separated by 16 years. We compared species richness and diversity between periods, sampling both tadpoles and adult frogs. We quantified tadpole microhabitat availability, alterations in immediate riparian vegetation, and changes in classes of land cover within buffers around streams (adult habitats) to test for their effects on species composition. We also tested for effects of human occupancy around streams on nestedness and turnover components of species diversity. Microhabitats and riparian vegetation explained some of the changes in species composition (or detection) between time periods. Nestedness seemed to be influenced by the stability of the landscape. Detectabilities were too low to support robust occupancy estimates for most species. Natural changes in local habitats occupied by anurans in montane meadows are likely to influence species distribution. Some species with robust estimates experienced change in their occupancy over the studied 16-year interval, although no anthropogenic causes could be directly associated with such changes. The low detectability of most species, even with thorough sampling effort, makes it very hard to detect amphibian declines and possibly tell them apart from natural population fluctuations. New techniques are needed that improve species detectability in such diverse tropical habitats.

Partitioning genetic and species diversity refines our understanding of species-genetic diversity relationships.

Disentangling the origin of species–genetic diversity correlations (SGDCs) is a challenging task that provides insight into the way that neutral and adaptive processes influence diversity at multiple levels. Genetic and species diversity are comprised by components that respond differently to the same ecological processes. Thus, it can be useful to partition species and genetic diversity into their different components to infer the mechanisms behind SGDCs. In this study, we applied such an approach using a high‐elevation Andean wetland system, where previous evidence identified neutral processes as major determinants of the strong and positive covariation between plant species richness and AFLP genetic diversity of the common sedge Carex gayana. To tease apart putative neutral and non‐neutral genetic variation of C. gayana, we identified loci putatively under selection from a dataset of 1,709 SNPs produced using restriction site‐associated DNA sequencing (RAD‐seq). Significant and positive relationships between local estimates of genetic and species diversities (α‐SGDCs) were only found with the putatively neutral loci datasets and with species richness, confirming that neutral processes were primarily driving the correlations and that the involved processes differentially influenced local species diversity components (i.e., richness and evenness). In contrast, SGDCs based on genetic and community dissimilarities (β‐SGDCs) were only significant with the putative non‐neutral datasets. This suggests that selective processes influencing C. gayana genetic diversity were involved in the detected correlations. Together, our results demonstrate that analyzing distinct components of genetic and species diversity simultaneously is useful to determine the mechanisms behind species–genetic diversity relationships.

Uniqueness of Protected Areas for Conservation Strategies in the European Union

Protected areas (PAs) constitute major tools in nature conservation. In the European Union (EU), the Birds and Habitats Directives are the most important policies for conservation strategy, legally preserving Europe’s characteristic, rare, endemic and threatened biota. We used occurrence data for species listed in the directives’ Annexes to assess the uniqueness of major PAs in the EU (National Parks, Biosphere Reserves); this is important for preserving the EU’s focal species. We developed a novel, multifunctional approach to calculate different metrics of conservation value that represent different components of species diversity within the PAs, involving inventory diversity, deviation from the species–area relationship, species rarity and differentiation diversity. Applying it, we found that individual PAs frequently vary considerably in their scores on different components, which are often disconnected from PA size. PAs around the EU periphery, often containing few species, are key to conserving species that are rare in the EU. Because our analysis focuses on EU priority species and includes different components of diversity, it allows more appropriate estimation of conservation value inside PAs in context of the EU than recent, high-profile, global-level research. We offer tools to evaluate, and information to regulate, the representativeness, persistence and efficiency of PAs.

Importance of Nesting Resources and Soil Conditions for the Recovery of Ant Diversity During Secondary Succession in a Tropical Rainforest

The secondary succession of tropical rainforest in abandoned agricultural fields modifies components of species diversity and processes of species colonization and replacement. In general, knowledge on invertebrate reassembly is lacking, even though invertebrate assemblages directly influence the maturation of forests. Ants are especially useful for testing hypotheses about the effects of resource diversity and microhabitat conditions. We experimentally assessed the effects of different successional stages on nest colonization. Then, we assessed whether nesting resources and microhabitat conditions (i.e., abiotic conditions) are potential mechanisms that influence the colonization pattern of twig-dwelling ants along a natural chronosequence for 1 year in the Lacandon region, Mexico. We found that ant species richness in twigs is correlated with total species found in leaf litter. The nest occupancy increased as succession progressed, but species richness did not change. Nests occupation increased to greater artificial nesting resource decomposition rates and lower soil pH. Meanwhile, species richness was increased only with lower soil compaction. Species composition changes among successional categories; the changes were greater with greater soil compaction and soil pH. The diversity of nesting resources did not drive twig-dwelling ant assembly. We conclude that the natural maturation of tropical forest enables greater colonization of twig-dwelling ants, but recovery of the species composition of assemblages after 30 years is incomplete, although it shows a recovery trend.

Defensive tradeoffs are not prerequisites to plant diversity in a two species model

Trait‐based theories of biodiversity consider interspecific tradeoffs among species‐specific traits as prerequisites to maintaining community evenness, a component of species diversity. Such tradeoffs are commonly observed in plant communities, particularly in relation to traits associated with resistance to herbivory. Indeed, global experiments show that interspecific tradeoffs are common between plant defense and growth or competitive ability; however, the positive effects of herbivory on plant diversity predicted by theories with trait‐based tradeoffs are far less commonly observed. Moreover, both the overall and relative importance of these tradeoffs in promoting plant diversity are not well known. To disentangle the relationships among growth, competition, and defense in relation to plant community evenness, we built a model that describes the effects of a shared herbivore on two plant species with the potential to differ in each of these traits. While tradeoffs between plant defense and growth or competitive ability can increase plant diversity via evenness, this is not always the case nor is it a requirement for increased diversity. Herbivores may increase plant diversity even in the absence of defensive tradeoffs, preferentially consuming apparently maladapted species, by limiting the negative effects of interspecific interactions. Therefore, the importance of defensive tradeoffs in increasing diversity may not be as important, or as straightforward, as previously hypothesized.

The influence of seasonal precipitation and grass competition on 20 years of forb dynamics in northern Chihuahuan Desert grassland

AbstractAimsIn arid grasslands forbs represent a large component of species diversity and provide a key resource for pollinators and consumers. However, low abundances and high temporal variability make it challenging to successfully predict forb presence and abundance from 1 yr to the next. In this study we: (1) characterize patterns of semi‐arid forb diversity and abundance over time; (2) determine the relative importance of direct vs indirect (via grass competition) effects of precipitation on forb richness and abundance; and (3) separate the effect of precipitation timing on forb community composition from the effects of precipitation amount and season.LocationSemi‐arid grassland, Sevilleta National Wildlife Refuge, Socorro County, central New Mexico, USA.MethodsWe analysed forb dynamics along two 400‐m long line‐intercept transects in response to inter‐annual and seasonal precipitation variability and abundance of perennial grasses using a unique 20‐yr species composition data set from ungrazed native grassland in the northern Chihuahuan Desert.ResultsForb richness and cover were significantly positively associated with precipitation across seasons. Total richness was high across the time series but substantially lower within any given year. A direct, positive effect of precipitation overrode any potential negative, indirect effect via grass competition. Although aggregate forb responses were strongly linked with precipitation, individual species responses were highly variable and generally not linked with either precipitation timing or season.ConclusionsIn the hotter, drier climate predicted by meteorological models for the US southwest, forbs may be negatively impacted if winter moisture decreases and monsoon precipitation becomes more variable. On the other hand, the flexibility exhibited by forbs in germination and establishment throughout the growing season may help buffer some common species to increased inter‐annual precipitation variability.