Competitive Exclusion Research Articles

Waste reduction decreases rat activity from peri-urban environment.

Globally, species in the genus Rattus (specifically Rattus rattus and Rattus norvegicus), are some of the most influential invasive taxa due to their high rates of competitive exclusion and large dietary breadth. However, the specific foraging strategies of urban-adjacent populations remain largely unknown. We examined Rattus spp. dependency on human food supplementation in a population on adjacent non-developed (or peri-urban) land. Via linear regression modeling, we measured rodent activity changes between native and invasive species before and after a decrease in human supplementation due to the COVID-19 lockdown in Santa Cruz, California, USA. We documented invasive rat activity via camera traps in normal (pre-COVID lockdown) conditions near dining halls and similar waste sources, and again under COVID lockdown conditions when sources of human supplementation were drastically decreased. After 120 trap nights we found a significant decrease (p < 0.001) in Rattus activity after the removal of human refuse, while native small mammal activity remained unchanged (p = 0.1). These results have strong conservation implications, as they support the hypothesis that proper waste management is an effective, less-invasive form of population control over conventional rodenticides.

Drivers of Interspecific Spatial Segregation in Two Closely‐Related Seabird Species at a Pan‐Atlantic Scale

ABSTRACTAimEcologically similar species living in sympatry are expected to segregate to reduce the effects of competition where resources are limiting. Segregation from heterospecifics commonly occurs in space, but it is often unknown whether such segregation has underlying environmental causes. Indeed, species could segregate because of different fundamental environmental requirements (i.e., ‘niche divergence’), because competitive exclusion at sympatric sites can force species to either change the habitat use they would have at allopatric sites (i.e., ‘niche displacement’) or to avoid certain areas, independently of habitat (i.e., ‘spatial avoidance’). Testing these hypotheses requires the comparison between sympatric and allopatric sites. Understanding the competitive mechanisms that underlie patterns of spatial segregation could improve predictions of species responses to environmental change, as competition might exacerbate the effects of environmental change.LocationNorth Atlantic and Arctic.TaxaCommon guillemots Uria aalge and Brünnich's guillemots Uria lomvia.MethodsHere, we examine support for these explanations for spatial segregation in two closely‐related seabird species, common guillemots (Uria aalge) and Brünnich's guillemots (U. lomvia). For this, we collated a pan‐Atlantic data set of breeding season foraging tracks from 1046 individuals, collected from 20 colonies (8 sympatric and 12 allopatric). These were analysed with habitat models in a spatially transferable framework to compare habitat preferences between species at sympatric and allopatric sites.ResultsWe found no effect of the distribution of heterospecifics on local habitat preferences of the focal species. We found differences in habitat preferences between species, but these were not sufficient to explain the observed levels of spatial segregation at sympatric sites.Main ConclusionsAssuming we did not omit any relevant environmental variables, these results suggest a mix of niche divergence and spatial avoidance produces the observed patterns of spatial segregation.

When spiders take over: the expulsion of giant Amazonian ants from their nest

Spiders have been documented using nests of various ant species. In this study, we recorded the non-harmonious use of a nest and the expulsion of giant Amazonian ants from their nest by a Diplura spider. Both species inhabit South American forests, including the Amazon rainforest and Cerrado. This event took place in the northern Cerrado of Brazil during the rainy season. The expropriation process lasted 13 days, beginning with the simultaneous occupation of the anthill and culminating in the complete eviction of the ants. Over the last two days, we observed intense ant activity at a second entrance to the anthill and the construction of a new nest. We propose that the funnel-web spider was using the ant nest as shelter. However, the simultaneous coexistence may have been limited due to the spider web blocking an entrance and dietary overlap leading to competitive exclusion.

Biotics and bacterial function: impact on gut and host health.

The human gut microbiota, the vast community of microbes inhabiting the gastrointestinal tract, plays a pivotal role in maintaining health. Bacteria are the most abundant organism, and the composition of bacterial communities is strongly influenced by diet. Gut bacteria can degrade complex dietary carbohydrates to produce bioactive compounds such as short-chain fatty acids. Such products influence health, by acting on systemic metabolism, or by virtue of anti-inflammatory or anti-carcinogenic properties. The composition of gut bacteria can be altered through overgrowth of enteropathogens (e.g., Campylobacter, Salmonella spp.), leading to dysbiosis of the gut ecosystem, with some species thriving under the altered conditions whereas others decline. Various "biotics" strategies, including prebiotics, probiotics, synbiotics, and postbiotics, contribute to re-establishing balance within the gut microbial ecosystem conferring health benefits. Prebiotics enhance growth of beneficial members of the resident microbial community and can thus prevent pathogen growth by competitive exclusion. Specific probiotics can actively inhibit the growth of pathogens, either through the production of bacteriocins or simply by reducing the gastrointestinal pH making conditions less favorable for pathogen growth. This review discusses the importance of a balanced gut ecosystem, and strategies to maintain it that contribute to human health.

Probiotics and Fecal microbiota transplants: Mechanisms underlying the Therapeutic Benefits in Manipulating the Gut Microbiome

The mechanisms underlying therapeutic benefits in manipulating the human gut microbiome through Fecal microbiota transplantation (FMT) and probiotic administration has been a subject of great study. Dysbiosis, as in imbalance of the human gut bacterial composition, has been linked to immunodeficiency and increased susceptibility to chronic infections. Manipulating the microbiome works as a means of reversing this effect for therapeutic benefits. Competitive exclusion refers to the microbiota outcompeting pathogens for nutrients and creating an unfavorable environment for pathogenic growth. Preliminary studies show, toxin inactivation can occur through protease activity, while pathogen viability can be impacted directly through the stimulation of host-cell defenses and bacteriocin-like mechanisms. FMT has been established as a way to treat Clostridium difficile infections and along with probiotic-use it has been assessed to if and how it can carry therapeutic benefits in conditions such as inflammatory bowel disease (IBS), obesity, metabolic syndrome, gastrointestinal disorders, and even mental health disorders. Studies suggest a need for further investigation into the underlying mechanisms of treating dysbiosis in conferring therapeutic benefits.

Functional Traits Predict Outcomes of Current and Novel Competition Under Warmer Climate.

Functional traits offer a potential avenue to generalize and forecast the impacts of changing competition on plant communities, including changing outcomes of competition among species that currently interact (current competition) or that will interact in the future following range shifts (novel competition). However, it remains unclear how well traits explain variation in the outcomes of current and novel competition as well as the underlying processes determining coexistence or competitive exclusion, under changing climate. Here, we interacted pairs of high and low-elevation species in three sites across an elevation gradient in the Swiss Alps. For each species pair, we quantified the population-level outcomes of competition (invasion growth rates), relative fitness differences, and niche overlap and related these to 15 functional traits that were measured in each site. Most traits were significantly associated with invasion growth rates at the low elevation, where species had greater relative fitness differences, but these associations were much weaker towards higher elevations. This appears to be because traits, particularly those associated with light competition, captured species' relative fitness differences at lower elevations, but not at the high elevation site, highlighting that the predictive ability of traits can depend on environmental context. The amplified relative fitness differences towards lower elevations suggest that climate warming may increase the likelihood of competitive exclusion. In addition, novel competitors tended to show greater niche overlap than current competitors, leading to stronger overall competitive effects. However, in general, trait differences predicted competitive outcomes of novel and current competitors similarly well, suggesting that traits can predict interactions between species that do not yet interact. Our study reinforces the importance of considering changing interactions for predicting species responses to climate change and provides experimental evidence supporting the usefulness of functional trait differences in forecasting the impacts of future plant interactions under changing climate.

Pore-forming aegerolysin and MACPF proteins in extremotolerant or extremophilic fungi.

Aegerolysin proteins are involved in various interactions by recognising a molecular receptor in the target organism. The formation of pores in combination with larger, non-aegerolysin-like protein partners (such as membrane attack complex/perforin proteins [MACPFs]) is one of the possible responses in the presumed competitive exclusion of other organisms from the ecological niche. Bicomponent pairs are already observed at the gene level. Fungi growing under extreme conditions can be divided into ubiquitous and extremotolerant generalists which can compete with mesophilic species and rare, isolated extremophilic and extremotolerant specialists with narrow ecological amplitude that cannot compete. Under extreme conditions, there are fewer competitors, so fungal specialists generally produce less diverse and complicated profiles of specialised molecules. Since extremotolerant and extremophilic fungi have evolved in numerous branches of the fungal tree of life and aegerolysins are unevenly distributed across fungal genomes, we investigated whether aegerolysins, together with their partner proteins, contribute to the extreme survival ecology of generalists and specialists. We compiled a list of 109 thermo-, psihro-, acido-, alkali-, halo-, metallo- and polyextremo-tolerant/-philic fungal species. Several challenges were identified that affected the outcome: renaming fungal species, defining extremotolerant/extremophilic traits, identifying extremotolerant/extremophilic traits as metadata in databases and linking fungal isolates to fungal genomes. The yield of genomes coding aegerolysins or MACPFs appears to be lower in extremotolerant/extremophilic fungi compared to all fungal genomes. No candidates for pore-forming gene pairs were identified in the genomes of extremophilic fungi. Aegerolysin and MACPFs partner pairs were identified in only two of 69 species with sequenced genomes, namely in the ubiquitous metallotolerant generalists Aspergillus niger and A. foetidus. These results support the hypothesised role of these pore-forming proteins in competitive exclusion.

Metarhizium fight club: Within-host competitive exclusion and resource partitioning.

Both Metarhizium robertsii ARSEF 2575 (Mr2575) and Metarhizium anisopliae ARSEF 549 (Ma549) infect a range of insects whilst also interacting with plants; however, little is known about the traits that affect the competitive ability of different strains. We examined the interactions between Mr2575 and Ma549 in culture and during co-infection of plants (Arabidopsis thaliana) and insects. Mr2575 outcompetes Ma549 under nutrient-limiting conditions, including root exudates, giving it a priority advantage on Arabidopsis roots. However, during co-infection of Manduca sexta or Drosophila melanogaster, Ma549's higher blastospore production enhanced its competitive ability within the host. In large M. sexta (fifth instar), blastospores facilitate dispersal, suppress host melanization and prevent Mr2575 from spreading from infection sites, reducing conidia production. However, colonization of smaller hosts such as first instar M. sexta and D. melanogaster did not provide Ma549 with a competitive advantage, as conidial production was dependent on retaining control of the cuticle through which conidiating hyphae emerge. Unexpectedly, Ma549 and Mr2575 segregate within hosts, suggesting resource partitioning with Mr2575 predominating in the thoraxes of Drosophila, especially in females, and Ma549 in the abdomen. In fifth instar M. sexta, Mr2575 was most prevalent around spiracles and the front end of segments, despite Ma549 and Mr2575 having similar susceptibility to hypoxia. Dispersing conidia homogeneously into the hemocoel of fifth instar M. sexta eliminated the blastospore production advantage, making Ma549 and Mr2575 equally competitive, with strict partitioning of Mr2575 at the anterior and Ma549 at the posterior ends of segments. As Metarhizium species have multiple roles in natural ecosystems and agroecosystems these discoveries are relevant to understanding their impact on maintaining biodiversity and for exploiting them to enhance food security.

Intraspecific predator interference promotes biodiversity in ecosystems.

Explaining biodiversity is a fundamental issue in ecology. A long-standing puzzle lies in the paradox of the plankton: many species of plankton feeding on a limited variety of resources coexist, apparently flouting the competitive exclusion principle (CEP), which holds that the number of predator (consumer) species cannot exceed that of the resources at a steady state. Here, we present a mechanistic model and demonstrate that intraspecific interference among the consumers enables a plethora of consumer species to coexist at constant population densities with only one or a handful of resource species. This facilitated biodiversity is resistant to stochasticity, either with the stochastic simulation algorithm or individual-based modeling. Our model naturally explains the classical experiments that invalidate the CEP, quantitatively illustrates the universal S-shaped pattern of the rank-abundance curves across a wide range of ecological communities, and can be broadly used to resolve the mystery of biodiversity in many natural ecosystems.

Intraspecific predator interference promotes biodiversity in ecosystems

Explaining biodiversity is a fundamental issue in ecology. A long-standing puzzle lies in the paradox of the plankton: many species of plankton feeding on a limited variety of resources coexist, apparently flouting the competitive exclusion principle (CEP), which holds that the number of predator (consumer) species cannot exceed that of the resources at a steady state. Here, we present a mechanistic model and demonstrate that intraspecific interference among the consumers enables a plethora of consumer species to coexist at constant population densities with only one or a handful of resource species. This facilitated biodiversity is resistant to stochasticity, either with the stochastic simulation algorithm or individual-based modeling. Our model naturally explains the classical experiments that invalidate the CEP, quantitatively illustrates the universal S-shaped pattern of the rank-abundance curves across a wide range of ecological communities, and can be broadly used to resolve the mystery of biodiversity in many natural ecosystems.

Stable, multigenerational transmission of the bean seed microbiome despite abiotic stress.

Microbiota that originate in the seed can have consequences for the education of the plant immune system, competitive exclusion of pathogens from the host tissue, and host access to critical nutrients. Our research objective was to investigate the consequences of the environmental conditions of the parent plant for bacterial seed microbiome assembly and transmission across plant generations. Using a fully factorial, three-generational experimental design, we investigated endophytic seed bacterial communities of common bean lines (Phaseolus vulgaris L.) grown in the growth chamber and exposed to either control conditions, drought, or excess nutrients at each generation. We applied 16S rRNA microbiome profiling to the seed endophytes and measured plant health outcomes. We discovered stable transmission of 22 bacterial members, regardless of the parental plant condition. This study shows the maintenance of bacterial members of the plant microbiome across generations, even under environmental stress. Overall, this work provides insights into the ability of plants to safeguard microbiome members, which has implications for crop microbiome management in the face of climate change.IMPORTANCESeed microbiomes initiate plant microbiome assembly and thus have critical implications for the healthy development and performance of crops. However, the consequences of environmental conditions of the parent plant for seed microbiome assembly and transmission are unknown, but this is critical information, given the intensifying stressors that crops face as the climate crisis accelerates. This study provides insights into the maintenance of plant microbiomes across generations, with implications for durable plant microbiome maintenance in agriculture on the changing planet.

Plant traits and seasonality shape coexistence and niche segregation patterns among spider species.

Understanding the mechanisms that enable species coexistence is a central question in ecology, as it helps to comprehend species diversity. One of the most common stabilizing mechanisms of coexistence is niche segregation, which can prevent the competitive exclusion of the fittest competitor. Niche segregation can manifest itself at various temporal and spatial scales, allowing provide essential insights into understanding the stabilizing mechanisms facilitating the coexistence of species. We assessed coexistence patterns among flower-dwelling spiders in two ways, in the first set of analyses, we investigated the factors influencing the quantity of spider individuals and species. The second approach we investigate the spatio-temporal segregation between species, effectively examining the coexistence patterns. We observed that the presence of inflorescences per plant, the number of flowers per inflorescence, and the presence of EFNs play a significant role in increasing spider abundance and richness. We find only a marginal seasonal effect, suggesting that spiders have constant access to resources throughout the year. Our niche overlap analysis demonstrated synchrony in the spatial occupation of niches by different spider species. The coexistence patterns appeared to be unaffected by the number of inflorescences. The greater number of inflorescences will enable a greater availability of niches, and consequently more abundance and richness of species of spiders the plant can sustain. Our results suggest that, to mitigate the adverse consequences of competitive interactions, spiders tend to adopt spatial partitioning as a strategy to facilitate the coexistence of spiders living in reproductive structures on plants in the Brazilian savanna.

Mechanisms promoting biodiversity in ecosystems

AbstractExplaining biodiversity is the central focus in theoretical ecology. A significant obstacle arises from the competitive exclusion principle (CEP), which states that two species competing for the same type of resources cannot coexist at constant population densities, or more generally, the number of consumer species cannot exceed that of resource species at steady states. The conflict between CEP and biodiversity is exemplified by the paradox of the plankton, where a few types of limiting resources support a plethora of plankton species. In this review, we introduce mechanisms proposed over the years for promoting biodiversity in ecosystems, with a special focus on those that alleviate the constraints imposed by the CEP, including mechanisms that challenge the CEP in well‐mixed systems at a steady state or those that circumvent its limitations through contextual differences.

Stable isotope ratios indicate trophic niche overlap in three sympatric delphinid species in the Eastern Ionian Sea

AbstractStudying the sympatric ecology of closely related marine top predator species is of interest both from an ecological and conservation standpoint, because it provides insights into ecosystem functioning, how such species avoid competitive exclusion, and how human stressors may impact these patterns. In this study, we examine the isotopic niche of three sympatric dolphin species that inhabit the eastern Ionian Sea: the common dolphin (Delphinus delphis), the striped dolphin (Stenella coeruleoalba), and the common bottlenose dolphin (Tursiops truncatus). We used carbon, nitrogen, and sulfur isotope ratios to construct three‐dimensional isotope niches and calculate niche sizes and their overlaps among the three species to study interspecific competition for resources. Common dolphin niche overlapped with that of the striped dolphin by 77%, suggesting potential resource competition between these two species. The niche overlap between striped/common dolphins and bottlenose dolphins was much lower (47%). Large differences in isotopic ratios were found between the bottlenose dolphins of the Ionian Sea and those of a largely isolated population in the adjacent semienclosed Gulf of Ambracia, further corroborating the previously documented isolation between the two populations.

Mutualistic interactions facilitate invasive species spread

Abstract Invasive species are major drivers of global ecosystem change. They often displace native species through competitive exclusion, creating novel species interactions. These interactions can lead to ecological cascades, where the presence of one invasive species enhances the fitness of another. Despite this, the mechanisms that underpin these mutualistic interactions and promote secondary invasions remain poorly understood. We assessed how the introduction of the invasive Argentine ant (Linepithema humile) alters mutualistic interactions within the recipient community, enhancing the dispersal and fitness of species of a secondary invasive plant genus (Acacia spp.). Our study examines these interactions at the community, individual species, and trait levels for a range of native and non‐native ant and plant species. Specifically, we aimed to investigate the direct and indirect effects of L. humile on seed dispersal mutualisms. We found that in L. humile invaded locations, seeds of the invasive Acacia plant species were approximately three times more likely to be dispersed than seeds of native endemic plant species. This preference is driven by indirect changes in the community structure of native seed‐dispersing ants, rather than direct interactions between the invasive ant and plant species. Moreover, we found that native ant species that co‐exist with L. humile, such as Tetramorium sericeiventre, respond to a narrower range of seed traits—traits which the invasive Acacia seeds possess. Our findings suggest that the invasion of L. humile has cascading effects on ant‐plant mutualisms, potentially increasing community permeability to secondary invasions. These results highlight that the impact of invaders like the Argentine ant may be greater than initially perceived, driving losses in both biological and functional plant diversity. Read the free Plain Language Summary for this article on the Journal blog.

COVID-19 Pandemic and Vaccine Imperialism

The COVID-19 pandemic revealed and exacerbated the global inequalities regarding the availability and access to vaccines. Many terms have appeared in the academic literature (“vaccine colonialism,” “vaccine nationalism,” “vaccine apartheid”) trying to capture and interpret these inequalities, failing in most cases to realistically explain the upstream causes of the observed injustices. A Marxist perspective on the contrary emphasizes the structural causes of inequalities in capitalism and attributes them to the existence of economic exploitation. “Vaccine imperialism,” which refers to the control that advanced industrialized countries exert on the development, production, and distribution of vaccines at the expense of less-developed economies, can describe and explain in a more realistic way the observed inequalities during the pandemic. Our study proposes a circuit of vaccine imperialism that explains how economic imperialist exploitation takes place via transfers of value from less-developed economies (vaccine recipient countries) to imperialist economies (vaccine producing and patent holder countries) using four different channels: (a) protection of intellectual property (IP) rights (patents), (b) earnings from royalty payments for the use of vaccines (monopolistic prices and profits), (c) exercise of monopoly power on the production and distribution of vaccines (control over the quantity of vaccines supplied, exclusion of competitors through vaccine licensing), and (d) public debt servicing. JEL Classification: I14, I18, D43, F54, F55, H51

Contested role boundaries and professional title: Implications of the independent review of podiatric surgery in Australia.

In October 2023, the Podiatry Board of Australia commissioned an independent review of the regulation of podiatric surgery in Australia, with a remit to re-evaluate the regulatory framework, identify any risks to patient safety and recommend improvements to public protection. It reported in March 2024 and set out 14 key recommendations. The review was prompted by a number of complaints about podiatric surgeons but also reflected calls for reform by the medical profession and several critical media reports. This paper sets out to examine the review report, alongside the concerns of the medical profession and the media articles expressed within it, through the lens of an established sociological framework focused on interprofessional conflict and the contested use of professional titles. As a review rather than the research paper, the Independent Review of Podiatric Surgery (the 'Paterson Report') served as data for the sociological analysis, adopting a Neo-Weberian and Bordieuan framework to examine the strategies adopted by the medical profession and media reports cited in the report, consistent with the exercise of professional power. The sociological analysis provides insights into the ways in which professions seek to maintain symbolic, social, cultural and economic privileges and rewards through the exclusion of competitors, using strategies such as social closure, symbolic violence, symbolic devaluation, gatekeeper roles, and jurisdictional disputes. The review report acknowledges the influence of the medical profession and its opposition to the practice of podiatric surgery and use of the title 'podiatric surgeon'. The arguments made and strategies deployed are consistent with those found in the wider literature. In light of these findings, the implications for the future of podiatric surgery are considered in terms of professional practice, use of professional title, and access to public funding.

A primer of community ecology using the R language

AbstractCommunity ecology beginners often struggle to understand theories expressed in complex mathematical formulas and to master computer programming. To remedy this situation, this article provides a practical, R‐based introduction to community ecology by illustrating core concepts (vital rates, carrying capacity, density dependence) and models that can be used to explore the patterns of species abundance and diversity. The structure of this article consists of three modeling exercises, each asking a general question that can be answered by a combination of theory and R programming: (1) what determines the abundance of species, and what makes a population persist and go extinct?; (2) what determines the distribution of species and species diversity?; (3) what determines the relative abundance of species and what allows species to coexist? Through the exercises, I discuss the following five concepts and ideas that provide valuable insights into the questions: (i) the tragedy of the commons, (ii) the theory of island biogeography, (iii) competitive exclusion, (iv) the neutral theory of biodiversity, and (v) frequency dependence. These materials are thus designed to guide the reader in developing an intuition for ecological thinking that will help capture the essence of the global environmental and biodiversity crisis. Although this article does not delineate the scope and depth of the vast field of community ecology, I hope that it will motivate the reader to step up to a more formal introduction to community ecology.

The microbiome and metatranscriptome of a panel from the Sarracenia mapping population reveal complex assembly and function involving host influence.

Sarracenia provide an optimal system for deciphering the host-microbiome interactions at various levels. We analyzed the pitcher microbiomes and metatranscriptomes of the parental species, and F1 and F2 generations from the mapping population (Sarracenia purpurea X Sarracenia psittacina) utilizing high-throughput sequencing methods. This study aimed to examine the host influences on the microbiome structure and function and to identify the key microbiome traits. Our quality datasets included 8,892,553 full-length bacterial 16s rRNA gene sequences and 65,578 assembled metatranscripts with microbial protein annotations. The correlation network of the bacterial microbiome revealed the presence of 3-7 distinct community clusters, with 8 hub and 19 connector genera. The entire microbiome consisted of viruses, bacterial, archaea, and fungi. The richness and diversity of the microbiome varied among the parental species and offspring genotypes despite being under the same greenhouse environmental conditions. We have discovered certain microbial taxa that are genotype-enriched, including the community hub and connector genera. Nevertheless, there were no significant differences observed in the functional enrichment analysis of the metatranscriptomes across the different genotypes, suggesting a functional convergence of the microbiome. We found that the pitcher microcosm harbors both rhizosphere and phyllosphere microbiomes within its boundaries, resulting in a structurally diverse and functionally complex microbiome community. A total of 50,424 microbial metatranscripts were linked to plant growth-promoting microbial proteins. We show that this complex pitcher microbiome possesses various functions that contribute to plant growth promotion, such as biofertilization, bioremediation, phytohormone signaling, stress regulation, and immune response stimulation. Additionally, the pitcher microbiome exhibits traits related to microbe-microbe interactions, such as colonization of plant systems, biofilm formation, and microbial competitive exclusion. In summary, the demonstrated taxonomical divergence and functionally convergence of the pitcher microbiome are impacted by the host genetics, making it an excellent system for discovering novel beneficial microbiome traits.

Cover crops dismantle keystone ant/aphid mutualisms to enhance insect pest suppression and weed biocontrol

Abstract Cover crops are multifunctional tools that mitigate environmental impacts of agriculture, enhance resilience to weather extremes and suppress weeds and arthropod pests. Cover crops provide non‐crop food and habitat resources that attract natural enemies of pests, but their outcomes for pest management are less clear in regions where keystone mutualisms between red imported fire ants and aphids dominate. Here, we manipulate ant exclusion treatments and cover crop treatments (living mulches and terminated cover crops) that vary in food/habitat resources and examine responses of ants, aphids, other herbivores and predators in a cotton agroecosystem. Living mulches reduced both ants and aphids in the crop canopy by 97% and 93%, respectively, relative to bare soil treatments, and terminated cover crops reduced them as well by a lesser degree (~50%). Non‐aphid herbivores occurred in low densities system‐wide and increased in living mulches, whilst native predators had variable responses to cover crops and ant exclusion. Cover crops had no effect on prey removal in the crop canopy, but living mulches tripled rates of weed seed biocontrol, relative to bare soils. Cover crops elicited a shift in fire ant foraging from cotton foliage downward to the soil‐surface, preventing competitive exclusion by keystone ant/aphid mutualists that dominate crop monocultures. Cover crops altered the system‐wide impacts of fire ants: reducing ecosystem disservices (i.e. aphid tending) and enhancing ecosystem services (i.e. weed seed biocontrol). These results provide incentives for cover crop adoption as a regenerative practice in large‐scale commercial agriculture.