Communities In Different Ecosystems Research Articles

New perspectives on metagenomic analysis for pathogen monitoring in sustainable freshwater aquaculture production: a systematic review

The freshwater and saltwater aquatic food sector has experienced the most significant growth in recent years and is increasingly recognized as a sustainable alternative for fostering prosperous societies self-sufficiently and ecologically. One primary economic and health risk factor in aquaculture production is health control, with potentially more severe impacts observed in tropical and developing countries. While metagenomics holds great promise for application in agro-industrial fields like aquaculture, its adoption remains limited. Consequently, this study aimed to assess the prospects for developing and applying metagenomics in identifying pathogens in freshwater aquaculture. The WIPO database was used to search for patents developed using metagenomics to monitoring pathogens in freshwater aquaculture. Metagenomics methods have been extensively employed in different fields, such as, medicine, veterinary, biotechnology, agriculture, particularly in studies focusing on microbial communities in different ecosystems. In aquaculture, the utilization of metagenomics has predominantly revolved around investigating antibiotic resistance genes, primarily in saltwater farms. Despite this, freshwater aquaculture, particularly in fish and crustacean farming, aligns closely with sustainable development goals, notably (SDGs) 2, 3, 6, and 13. Countries such as the United States of America, South Korea, and Canada stand at the forefront of utilizing metagenomics for disease monitoring in freshwater aquaculture, evidenced by their active patent developments. The metagenomic analysis, coupled with bioinformatics tools and databases, represents a rapid, secure, and non-invasive approach to environmental monitoring for preventive purposes.Systematic review registrationhttps://osf.io/srpyz/, identifier 10.17605/OSF.IO/SRPYZ.

Ecology and Diversity of Weed Communities in the Northern Andes under Different Anthropogenic Pressures

Weeds can have both positive and negative effects on agricultural environments. However, despite the growing interest in the ecology of weed communities in agricultural areas, a few studies have been carried out in the northern region of the Andes of Colombia, where urban and agricultural expansion have generated highly disturbed scenarios. The aim of this study was to analyze the diversity of vegetation and weed seed banks in three agricultural production systems and a forest ecosystem in the northern Andes of Colombia. Hill numbers were used to compare diversity, Beta diversity to assess changes in composition, and range—abundance–dominance curves at different sites. Likewise, indicator species were analyzed to find species associations to each system. The results revealed differences in the composition of weeds between the forest ecosystem and the agricultural production systems, with higher equitability in the forest ecosystem and higher dominance in agricultural systems. Significant differentiation was observed among the dominant species within each agricultural system, particularly highlighting those species considered pests due to their unique life history traits. These traits confer them with a greater advantage in the face of various anthropogenic selection pressures. These findings highlight the impact of anthropogenic disturbances on the ecological dynamics of weed communities in different ecosystems, which should be considered when planning integrated weed management techniques.

Regional differences in water beetle communities networks settling in dystrophic lakes in northern Poland

The relationships between the species that form the networks in small dystrophic lakes remain poorly recognised. To investigate and better understand the functioning of beetle communities in different ecosystems, we created three network models that we subjected to graph network analysis. This approach displays correlation–based networks of connections (edges) between objects (nodes) by evaluating the features of the whole network and the attributes of nodes and edges in the context of their roles, expressed by centrality metrics. We used this method to determine the importance of specific species in the networks and the interspecific relationships. Our analyses are based on faunal material collected from 25 dystrophic lakes in three regions of northern Poland. We found a total of 104 species representing different ecological elements and functional trophic groups. We have shown that the network of relationships between the biomass of species differs considerably in the three study regions. The Kashubian Lakeland had the highest cohesion and density, while the network in the Suwalki Lakeland was the thinnest and most heterogeneous, which might be related to the fractal structure and the degree of development of the studied lakes. Small–bodied predators that congregated in different clusters with species with similar ecological preferences dominated all networks. We found the highest correlations in the Masurian Lakeland, where we obtained the highest centralisation of the network. Small tyrphophiles typically occupied the central places in the network, while the periphery of the network consisted of clusters with different habitat preferences, including large predators. The species that were most important for network cohesion and density were mainly tyrphophilous species, such as Anacaena lutescens, Hygrotus decoratus, Enochrus melanocephalus and Hydroporus neglectus. The values of attributes determining the role of species in community networks were influenced by both biotic and environmental factors.

Comparison of the Structure of Soil Microbial Communities of Different Ecosystems Using the Microbiome Sequencing Approach

In this study, we aimed to compare the functional and taxonomic composition of soil microbial communities in different ecosystems, agricultural, natural grasslands, and old-growth forests, in the context of different environmental conditions. In this research, cultivable microbial quantification was performed by conventional plate-count techniques using different selective media. The taxonomic structure of microbe communities was evaluated using NGS metagenomic sequencing on the Illumina platform NovaSeq. The taxonomic analysis showed that individual land uses are characterized by the specific structure of communities; some taxonomic groups are specific only to agricultural, grassland, or forest ecosystems. After determining the abundance of functional groups of culturable microorganisms by the conventional plate-count method, statistically significant quantitative differences in physiological groups between the individual ecosystems were revealed. The metagenomic analysis revealed that different ecosystems are characterized by specific taxonomic groups of microorganisms and that general alpha diversity varies among individual land-use samples. Since the most unstable soil systems are agricultural, they are likely to suffer the most and will suffer more in the future from climate change than natural ones.

Community of Bark and Ambrosia Beetles (Coleoptera: Curculionidae: Scolytinae and Platypodinae) in Agricultural and Forest Ecosystems with Laurel Wilt.

Redbay ambrosia beetle, Xyleborus glabratus, is an invasive wood-boring pest first detected in the USA in 2002 in Georgia. The beetle's dominant fungal symbiont, Harringtonialauricola, causes laurel wilt, a lethal disease of trees in the Lauraceae. Over the past 20 years, X. glabratus and laurel wilt have spread to twelve southeastern states, resulting in high mortality of native Persea species, including redbay (P. borbonia), swampbay (P. palustris), and silkbay (P. humilis). Laurel wilt also threatens avocado (P. americana) in south Florida, but in contrast to the situation in forests, X. glabratus is detected at very low levels in affected groves. Moreover, other species of ambrosia beetle have acquired H. lauricola and now function as secondary vectors. To better understand the beetle communities in different ecosystems exhibiting laurel wilt, parallel field tests were conducted in an avocado grove in Miami-Dade County and a swampbay forest in Highlands County, FL. Sampling utilized ethanol lures (the best general attractant for ambrosia beetles) and essential oil lures (the best attractants for X. glabratus), alone and in combination, resulting in detection of 20 species. This study documents host-related differences in beetle diversity and population levels, and species-specific differences in chemical ecology, as reflected in efficacy of lures and lure combinations.

Comparing scavenging in marine and terrestrial ecosystems: a case study with fish and gull carcasses in a small Mediterranean island

Carrion consumption by scavengers is a key component of both terrestrial and aquatic food webs. However, there are few direct comparisons of the structure and functioning of scavenging communities in different ecosystems. Here, we monitored the consumption of 23 fish (seabream Sparus aurata) and 34 bird (yellow-legged gull Larus michahellis) carcasses on a small Mediterranean island (Isla Grosa, southeastern Spain) and surrounding waters in summer to compare the structure of the scavenger assemblages and their carrion consumption efficiencies in terrestrial and shallow water habitats. Scavenging was highly efficient both in marine and terrestrial environments, especially in the presence of a highly abundant vertebrate scavenger species, the yellow-legged gull. The vertebrate scavenger community was richer in the marine environment, whereas the invertebrate community was richer on land. The scavenger network was usually well-structured (i.e., nested), with the exception of the community associated with fish terrestrial carcasses, which were almost monopolized by yellow-legged gulls. In contrast, gulls left conspecific carcasses untouched, thus allowing longer persistence of gull carcasses on land and their exploitation by a diverse insect community. Our study shows important differences in the scavenging process associated with environment and carcass type. Promising avenues for further eco-evolutionary and applied research arise from the comparison of scavenging processes in terrestrial and marine ecosystems, from small islands to continents.

Indirect plant defenses: volatile organic compounds and extrafloral nectar

Indirect plant defense is an important component in regulating population dynamics and the structure of numerous communities in different ecosystems. These defenses mainly involve the emission of volatile organic compounds (VOCs) induced after damage by an herbivore. VOCs can play several ecological roles, such as help natural enemies locate prey or hosts, attract or repel other herbivores, mediate communication between neighboring plants and among different parts of the same plant, and affect the behavior of pollinators and seed dispersers. In addition to VOCs, some plants produce extrafloral nectar, which can enhance plant defense, by attracting, retaining, and increasing the efficiency of some natural enemies; however, among the associated costs, these compounds can attract other herbivorous species and exclude some natural enemies due to competition. Many factors can influence the production of indirect defenses by plants, such as the individual species, life stage, density of herbivores, age, abiotic factors, as well as the association of plants with symbiotic microorganisms. The potential of indirect plant defenses to reduce herbivory and increase the plant fitness has been well demonstrated. Indirect plant defenses may have ecological costs but can express phenotypic plasticity, as plants can reduce or increase the production of defenses according to the associated herbivory rate. Such variable expression of characteristics provides a barrier against the evolution of resistance by the associated herbivores. In this article, we intend to provide a review on volatile organic compounds and extrafloral nectar as indirect plant defenses, including some costs and benefits of these defense mechanisms.

Land degradation effects on composition of pioneering soil communities: An alternative successional sequence for dryland cyanobacterial biocrusts

Abstract In drylands, soil surfaces in interplant spaces are usually covered by biocrusts, which consist of communities of heterotrophic and chemoautotrophic bacteria, cyanobacteria, mosses, lichens, microalgae, fungi and other organisms. Cyanobacteria are of special interest because of their capacity to promote biocrust succession or increase soil fertility and stability. Therefore, some studies have analyzed their communities in different ecosystems, focusing on how different factors, such as temperature or altitude, influence their composition. Nevertheless, to our knowledge, the relationship between ecosystem degradation and cyanobacterial community composition has not yet been studied in depth. This could be determinant for the successful development of tools for restoring degraded biocrusts by cyanobacterial inoculation. Thus, the objective of this study was to analyze the effect of the ecosystem degradation level on cyanobacteria composition from topsoil communities, where they are keystone pioneering organisms. To do this, we analyzed the cyanobacterial diversity by molecular sequencing (16S rRNA gene) of the DNA extracted from biocrusts at different developmental stages, which were collected from three ecosystems in southeastern Spain. The selected ecosystems represent different “land-condition” states as a result of degradation processes. In one of them soil was removed by mining (the Gádor quarry), the second is a natural badland area (El Cautivo) where water erosion is intense, and the third ecosystem is a well-preserved area (Balsa Blanca). Our findings show that cyanobacterial richness decreases (up to 28 OTUs) as degradation increases and biocrust developmental stage decreases. Also, the relative abundances of most of the species were significantly correlated with the degradation state of the sampling site, either showing a positive or negative trend. Two of the species which increased in abundance with site degradation, and were especially abundant in incipient biocrusts, were Leptolyngbya frigida and Trichocoleus desertorum, while other species, also showing an increase in abundance with degradation, but having a higher relative abundance in most developed biocrusts, were Nostoc commune, Tolypothrix distorta and Scytonema sp. The significant correlation of these species with degradation at different biocrusts developmental stages, suggests an alternative developmental sequence for drylands, at least in more degraded ecosystems. In less degraded ones, the composition of the major cyanobacterial groups followed the common pattern of bundle-forming cyanobacteria (54.7%) pertaining to the Microcoleus genus followed by other non-heterocystous filamentous (17.4%), unicellular/colonial (7.5%) and heterocystous cyanobacteria (1.1%). In comparison, the cyanobacterial groups dominating the most incipient biocrusts, colonizing the most degraded soil, were the filamentous non-heterocystous (50.7%) and the bundle-forming cyanobacteria (48.9%). Therefore, our results show that some cyanobacterial species, which do not belong to traditional pioneer genera, are frequent colonizers of degraded soils, and then, they could be potentially used for producing a more efficient inoculum for inducing biocrust formation and restoring degraded soils. Finally, it is also remarkable that L. frigida appears as dominant in some biocrusts from drylands (up to 74.9% of abundance) being therefore demonstrated its wide distribution in nonpolar biomes and its capacity to also inhabit degraded arid soils.

Habitat-specific environmental factors regulate spatial variability of soil bacterial communities in biocrusts across northern China's drylands

Biocrusts are common biotic components in dryland ecosystems worldwide, they contain diverse soil organisms and effectively enhance soil stability and perform a series of key ecological functions. However, the geographical pattern of microbial communities in biocrusts is rarely assessed, despite it is closely related to the spatial variation of ecosystem functions in drylands. We assessed soil bacterial communities in biocrusts across four ecosystems (Gobi, desert, desert steppe and grassland) in a precipitation gradient (16–566 mm yr−1) in northern China. Bacterial OTU number and phylogenetic diversity did not linearly increase with decreasing aridity, they were significantly lower in Gobi and similar among desert, desert steppe and grassland. Soil bacterial community composition in Gobi and desert were different than those in desert steppe and grassland, and they were similar between Gobi and desert, this suggests the key role of habitat in structuring soil bacterial communities. The geographic pattern of soil bacterial communities was strongly influenced by both geographic distance and environmental factors. The first explanatory factor for the geographic variation of bacterial community dissimilarity differed among four ecosystems, being aridity in Gobi and desert, precipitation in desert steppe, and soil inorganic nitrogen in grassland. The geographic pattern of the bacterial functional group profile showed a similar pattern with community composition across four ecosystems, and the groups of containing mobile elements and gram negative bacteria were more abundant in drier habitats of Gobi and desert. Our results reveal the non-linear changes in diversity, composition and functional group of soil bacterial communities in biocrusts across the precipitation gradient from hyper-arid to semi-humid regions, and suggest that the geographic distance and habitat-specific environmental factors determine the distribution of soil bacterial communities in different ecosystems.

A comparison of rumen microbial profiles in dairy cows as retrieved by 454 Roche and Ion Torrent (PGM) sequencing platforms.

Next generation sequencing (NGS) technology is a widely accepted tool used by microbial ecologists to explore complex microbial communities in different ecosystems. As new NGS platforms continue to become available, it becomes imperative to compare data obtained from different platforms and analyze their effect on microbial community structure. In the present study, we compared sequencing data from both the 454 and Ion Torrent (PGM) platforms on the same DNA samples obtained from the rumen of dairy cows during their transition period. Despite the substantial difference in the number of reads, error rate and length of reads among both platforms, we identified similar community composition between the two data sets. Procrustes analysis revealed similar correlations (M2 = 0.319; P = 0.001) in the microbial community composition between the two platforms. Both platforms revealed the abundance of the same bacterial phyla which were Bacteroidetes and Firmicutes; however, PGM recovered an additional four phyla. Comparisons made at the genus level by each platforms revealed differences in only a few genera such as Prevotella, Ruminococcus, Succiniclasticum and Treponema (p < 0.05; chi square test). Collectively, we conclude that the output generated from PGM and 454 yielded concurrent results, provided stringent bioinformatics pipelines are employed.

The distance decay of similarity in communities of ectomycorrhizal fungi in different ecosystems and scales

Summary Despite recent advances in understanding community ecology of ectomycorrhizal fungi, little is known about their spatial patterning and the underlying mechanisms driving these patterns across different ecosystems. This meta‐study aimed to elucidate the scale, rate and causes of spatial structure of ectomycorrhizal fungal communities in different ecosystems by analysing 16 and 55 sites at the local and global scales, respectively. We examined the distance decay of similarity relationship in species‐ and phylogenetic lineage‐based communities in relation to sampling and environmental variables. Tropical ectomycorrhizal fungal communities exhibited stronger distance‐decay patterns compared to non‐tropical communities. Distance from the equator and sampling area were the main determinants of the extent of distance decay in fungal communities. The rate of distance decay was negatively related to host density at the local scale. At the global scale, lineage‐level community similarity decayed faster with latitude than with longitude. Synthesis. Spatial processes play a stronger role and over a greater scale in structuring local communities of ectomycorrhizal fungi than previously anticipated, particularly in ecosystems with greater vegetation age and closer to the equator. Greater rate of distance decay occurs in ecosystems with lower host density that may stem from increasing dispersal and establishment limitation. The relatively strong latitude effect on distance decay of lineage‐level community similarity suggests that climate affects large‐scale spatial processes and may cause phylogenetic clustering of ectomycorrhizal fungi at the global scale.

Does the edge effect influence plant community structure in a tropical dry forest?

Edge effects are considered a key factor in regulating the structure of plant communities in different ecosystems. However, regardless to few studies, edge influence does not seem to be decisive in semiarid regions such as the Brazilian tropical dry forest known as Caatinga but this issue remains inconclusive. The present study tests the null hypothesis that the plant community of shrubs and trees does not change in its structure due to edge effects. Twenty-four plots (20 x 20 m) were set up in a fragment of Caatinga, in which 12 plots were in the forest edges and 12 plots were inside the fragment. Tree richness, abundance and species composition did not differ between edge and interior plots. The results of this study are in agreement with the pattern previously found for semiarid environments and contrasts with previous results obtained in different environments such as Rainforests, Savanna and Forest of Araucaria, which indicate abrupt differences between the border and interior of the plant communities in these ecosystems, and suggest that the community of woody plants of the Caatinga is not ecologically affected by the presence of edges.

The use of metagenomic approaches to analyze changes in microbial communities.

Microbes are the most abundant biological entities found in the biosphere. Identification and measurement of microorganisms (including viruses, bacteria, archaea, fungi, and protists) in the biosphere cannot be readily achieved due to limitations in culturing methods. A non-culture based approach, called “metagenomics”, was developed that enabled researchers to comprehensively analyse microbial communities in different ecosystems. In this study, we highlight recent advances in the field of metagenomics for analyzing microbial communities in different ecosystems ranging from oceans to the human microbiome. Developments in several bioinformatics approaches are also discussed in context of microbial metagenomics that include taxonomic systems, sequence databases, and sequence-alignment tools. In summary, we provide a snapshot for the recent advances in metagenomics approach for analyzing changes in the microbial communities in different ecosystems.

Ecological studies on diversity of Herpetofauna in Asir region, Kingdom of Saudi Arabia.

Conservation of the biological diversity and sustainable use of the resources of earth are enshrined in Islamic low and principles. It is therefore fitting that in 2001 the kingdom of Saudi Arabia became a signatory to the Convention of Conservation on Biological Diversity that seeks to ensure the conservation of species and their habitats for all time. The study was carried out in Asir region, located in the southwest of the country. Topography and biotic elements of the environment were described. The study area is one of the richest regions of the Kingdom in the diversity of animals, where the region is characterized by the presence of a large group of wild animals belonging to different animal families. In this work, diversity of herpetofauna which found in the region was studied. Seven species of tailless amphibians (Anura) were recorded, belonging to three families, firstly Bufonidae which include four species, Bufo tihamicus, B. dhufarensis, B. arabicus and B. viridis, secondly Hylidae represented by only one species, a tree frog Hyla savignyi, and finally Ranidae represented by two species, Rana ridibunda and Euphlyctis ehrenbergii. The results showed that there are 38 species of reptiles; 23 species of lizards belonging to the families Gekkonidae, Lacertidae, Scincidae, Agamidae, Varanidae, and Chamaeleontidae and 14 species of snakes belonging to 5 families: Typholopidae, Leptotypholopidae, Colubridae, Elapidae, and Viperidae. Only one species ofTurtles, belongs to family Testudinidae, was recorded. This work was suggested to throw light on the diversity of herpetofauna in Asir region as an important part of the ecosystem that has to be maintained, and to determine species composition of amphibian and reptile communities in different ecosystems as indicators of biodiversity in the study area. It came also to suggest strategies and techniques to determine the abundance of these species.

Distribution patterns of ichthyoplankton communities in different ecosystems of the Northeast Atlantic

AbstractResults are presented of an extensive ichthyoplankton survey that covered the continental slope, the offshore banks and oceanic regions west of Ireland. Oceanographic measurements revealed domes of cold, less saline water over the Porcupine, Rockall and Faroese Banks, constituting Taylor columns. The most species‐rich stations were those found on and close to the offshore banks and the shelf edge. Larvae found in these areas were mainly from demersal fish species, including some commercial species such as haddock Melanogrammus aeglefinus, lemon sole Microstomus kitt (Walbaum, 1792), ling Molva molva (L.) and witch Glyptocephalus cynoglossus (L.). The deep water stations of the Rockall Trough and the north and west stations off the Rockall and Hatton Banks were characterized by a low number of species and high numbers of individuals of mesopelagic species such as Maurolicus muelleri and Benthosema glaciale. Results from multivariate statistical analysis confirmed that species compositions varied significantly at different sites and were related to environmental conditions, whereby sites of similar temperature, salinity and bottom depth harboured similar species assemblages. Generalized additive mixed modelling was used to model the relationship between species richness and environmental variables and confirmed that there was a significant negative relationship between species richness and bottom depth indicating that the offshore banks and the slope stations present favourable habitats for a large number of species.

Vegetation cover of forest, shrub and pasture strongly influences soil bacterial community structure as revealed by 16S rRNA gene T-RFLP analysis

Bacterial community structure is influenced by vegetation, climate and soil chemical properties. To evaluate these influences, terminal restriction fragment length polymorphism (T-RFLP) and cloning of the 16S rRNA gene were used to analyze the soil bacterial communities in different ecosystems in southwestern China. We compared (1) broad-leaved forest, shrub and pastures in a high-plateau region, (2) three broad-leaved forests representing a climate gradient from high-plateau temperate to subtropical and tropical regions and (3) the humus and mineral soil layers of forests, shrub lands and pastures with open and restricted grazing activities, having varied soil carbon and nutrient contents. Principal component analysis of the T-RFLP patterns revealed that soil bacterial communities of the three vegetation types were distinct. The broad-leaved forests in different climates clustered together, and relatively minor differences were observed between the soil layers or the grazing regimes. Acidobacteria dominated the broad-leaved forests (comprising 62% of the total clone sequences), but exhibited lower relative abundances in the soils of shrub (31%) and pasture (23%). Betaproteobacteria was another dominant taxa of shrub land (31%), whereas Alpha- (19%) and Gammaproteobacteria (13%) and Bacteriodetes (16%) were major components of pasture. Vegetation exerted more pronounced influences than climate and soil chemical properties.

Molecular analysis of fungal communities and laccase genes in decomposing litter reveals differences among forest types but no impact of nitrogen deposition

The fungal community of the forest floor was examined as the cause of previously reported increases in soil organic matter due to experimental N deposition in ecosystems producing predominantly high-lignin litter, and the opposite response in ecosystems producing low-lignin litter. The mechanism proposed to explain this phenomenon was that white-rot basidiomycetes are more important in the degradation of high-lignin litter than of low-lignin litter, and that their activity is suppressed by N deposition. We found that forest floor mass in the low-lignin sugar-maple dominated system decreased in October due to experimental N deposition, whereas forest floor mass of high-lignin oak-dominated ecosystems was unaffected by N deposition. Increased relative abundance of basidiomycetes in high-lignin forest floor was confirmed by denaturing gradient gel electrophoresis (DGGE) and sequencing. Abundance of basidiomycete laccase genes, encoding an enzyme used by white-rot basidiomycetes in the degradation of lignin, was 5-10 times greater in high-lignin forest floor than in low-lignin forest floor. While the differences between the fungal communities in different ecosystems were consistent with the proposed mechanism, no significant effects of N deposition were detected on DGGE profiles, laccase gene abundance, laccase length heterogeneity profiles, or phenol oxidase activity. Our observations indicate that the previously detected accumulation of soil organic matter in the high-lignin system may be driven by effects of N deposition on organisms in the mineral soil, rather than on organisms residing in the forest floor. However, studies of in situ gene expression and temporal and spatial variability within forest floor communities will be necessary to further relate the ecosystem dynamics of organic carbon to microbial communities and atmospheric N deposition.

Composition of root‐colonizing arbuscular mycorrhizal fungal communities in different ecosystems around the globe

Summary Arbuscular mycorrhizal (AM) fungi are obligate root symbionts that are present in most terrestrial ecosystems and have roles in plant mineral nutrition, carbon cycling and biotic interactions. In this work, 26 publications were surveyed that report on the occurrence of natural root‐colonizing AM fungi identified using rDNA region sequences. A total of 52 host plant species were investigated. Sixteen publications provided data enabling a comparison to be made of AM fungal taxon richness and community composition across 36 host plant species and 25 locations. Ninety‐five fungal taxa (small subunit rRNA gene sequence types) were involved, 49 of which were recorded from at least two study sites, and 65 from more than one host plant species. The number of AM fungal taxa per host plant species differed between habitat types: a significantly higher richness was found in tropical forests (18.2 fungal taxa per plant species), followed by grasslands (8.3), temperate forests (5.6) and habitats under anthropogenic influence (arable fields and polluted sites, 5.2). AM fungal communities exhibit differing compositions in broadly defined habitat types: tropical forests, temperate forests and habitats under anthropogenic influence. Grassland locations around the world host heterogeneous AM fungal communities. A number of AM fungi had a global distribution, including sequence types related to the Glomus intraradices/fasciculatum group, G. mosseae, G. sp. UY1225 and G. hoi, as well as the Glomus and Scutellospora types of unknown taxonomic affiliation. Widespread taxa occur in both natural and anthropogenic (disturbed) habitats, and may show high local abundance. However, about 50% of taxa have been recorded from only a single site. The current global analysis of AM fungal communities suggests that soil micro‐organisms may exhibit different distribution patterns, resulting in a high variability of taxon richness and composition between particular ecosystems.