Common Practice In Aquaculture Research Articles

Modelling the impact of replacing fish oil with plant oils: A meta‐analysis to match the optimal plant oil for major cultured fish

AbstractThe replacement of fish oil with plant oils is a common practice in aquaculture to compensate for the shortage of fish oil supply and has been thoroughly studied. However, because the experimental conditions vary in many aspects, the results are usually inconsistent quantitatively. Therefore, a meta‐analysis was conducted based on a dataset containing 328 articles to systematically model the influence of plant oils on the main aquaculture fish. In addition to demonstrating the species‐specific dose‐dependent impact of plant oils on fish growth, feed utilization efficiency, lipid deposition and health parameters, we have also investigated the role of other factors in this process. We found that the adverse effects caused by plant oils worsen as the experimental duration extends for Atlantic salmon, while Gilthead seabream and European seabass gradually adapt to the change. Further, water temperature could be a decisive factor for Rainbow trout, and early adaptation to plant oils would be helpful for Gilthead seabream. Moreover, sufficient fishmeal supply could alleviate the adverse effects caused by plant oils for most species, but for Gilthead seabream and European seabass, the growth suppression effect of plant oil was larger when fed high‐fishmeal diets. Besides, by comprehensively considering the effects of plant oils, we matched the potential optimal plant oil for each fish species. Our article quantitatively modelled the adverse effects of replacing fish oil with plant oils, investigated the influences of assistant factors and offered a panorama of the research status with emphasis on potential breakthrough orientations.

Aquaculture practices in Bangladesh: A synopsis on prospects, productivity, and problems

AbstractAquaculture is one of the most prominent sectors of Bangladesh regarding nutrition, livelihood, and revenues. Although this nation has made promising improvements in aquaculture, several existing and imminent challenges can disrupt further development. Until now, no studies have extensively reviewed the existing aquaculture practices of this nation. Thus, this article elucidates the prospects, production, and problems of common aquaculture practices for the establishment of sustainable aquaculture in Bangladesh. The culture units are mainly natural bodies of water including earthen ponds, seasonal floodplains, baor, and gher. Although pond farming is the oldest and most dominant practice in this nation, the use of pen and cage cultures has also been intensified in the last decade. Regarding farmed fish species, indigenous major carps, exotic carps, tilapia, pangas catfish, and climbing perch are the major runners. Among crustaceans, giant freshwater prawns and tiger shrimp are the leading farmed species. Mud crab, biofloc, and seaweed farming are a growing focus that can evolve as artisanal and commercial‐scale farming practices in the near future. Major challenges that are potent enough to impede the establishment of viable aquaculture practices in Bangladesh are inadequate seed production, disease outbreaks, climate change, mediocre management practices, and limited mariculture propagations.

Melatonin Modulates Haematological and Water Quality Parameters Following a 100 Km Transportation of Clarias gariepinus by Road

Background: The transportation of fish is a common practice in aquaculture. However, the transportation of fish results in significant stress that can cause mortality and disease outbreaks due to compromised immune status. To ameliorate the effect of this stress, it is advocated that a suitable antioxidant be supplemented to fish before subjecting to transportation. Objectives: The present experiment was performed to evaluate the effect of melatonin on haematological parameters and water quality indices of Clarias gariepinus post-transportation. Methods: Forty adult C. gariepinus fishes, weighing an average of 450.46 g and measuring an average of 38.23 cm and 4.46 cm were used for the experiment. They were divided into two groups. Group I (MMF) was supplemented with melatonin in their feed every day for one month while group II (OMF) was not administered melatonin. The subjects were fed a commercial pelleted diet once a day throughout the experiment. They were maintained in a tank made of plastic, and water was originally provided through a flow-through system. Haematological and water quality parameters were determined before and after transportation. Results: After the transportation process, erythrocyte count and packed cell volume of the group I was significantly higher (P<0.05). In comparison to group II, the total leucocyte count, neutrophil count, and neutrophil/lymphocyte ratio of group I were all significantly lower (P<0.05). After transit, group II had considerably higher quantities of nitrite, nitrate, and ammonia (P<0.05) than group I. Following transportation, group II had significantly higher nitrite, nitrate, and ammonia (P<0.05) than group I. However, in group I, dissolved oxygen concentration was greater (P<0.05) than that of group II. Conclusion: Accordingly, it was concluded that melatonin affected various haematological and water quality variables in C. gariepinus and will ameliorate the stress of transportation.

An affordable and easy-to-use tool for automatic fish length and weight estimation in mariculture

Common aquaculture practices involve measuring fish biometrics at different growth stages, which is crucial for feeding regime management and for improving farmed fish welfare. Fish measurements are usually carried out manually on individual fish. However, this process is laborious, time-consuming, and stressful to the fish. Therefore, the development of fast, precise, low cost and indirect measurement would be of great interest to the aquaculture sector. In this study, we explore a promising way to take fish measurements in a non-invasive approach through computer vision. Images captured by a stereoscopic camera are used by Artificial Intelligence algorithms in conjunction with computer vision to automatically obtain an accurate estimation of the characteristics of fish, such as body length and weight. We describe the development of a computer vision system for automated recognition of body traits through image processing and linear models for the measurement of fish length and prediction of body weight. The measurements are obtained through a relatively low-cost prototype consisting of a smart buoy equipped with stereo cameras, tested in a commercial mariculture cage in the Mediterranean Sea. Our findings suggest that this method can successfully estimate fish biometric parameters, with a mean error of ± 1.15 cm.

Continuous physiological welfare evaluation of European whitefish (Coregonus lavaretus) during common aquaculture practices leading up to slaughter

European whitefish (Coregonus lavaretus) is an aquaculture species with the potential for expanded cultivation in the fresh and brackish waters of Northern Europe. Yet, relatively little species-specific information is available regarding the stress responses and associated welfare implications for this species in captivity. We addressed this knowledge gap by using a combination of implantable heart rate bio-loggers and a range of traditional stress indicators (e.g. haematological parameters and plasma concentrations of cortisol, glucose and ions) to comprehensively evaluate the physiological responses of freely swimming whitefish in captivity, as well as when subjected to aquaculture practices and stressors that commonly occur prior to and during slaughter. Whitefish appeared to recover rapidly from surgery, as resting heart rate decreased within 36 h to stabilize at ~25 beats min−1 for the next 18 days when fish were left relatively undisturbed (i.e. personnel were only present when feeding fish). In contrast with previous studies on farmed rainbow trout and Atlantic salmon, whitefish did not exhibit a clear circadian heart rate rhythm, which may be related to species-specific differences in diurnal locomotor activity. Whitefish also appear to have a well-developed capacity for thermal acclimation of heart rate, as daily resting heart rate did not change during the undisturbed period despite an increase in body temperature from ~6.8 to 11.2 °C. Following acute stressors such as crowding and transportation, the physiological response of whitefish typically involved transient elevations in heart rate, plasma cortisol and glucose, and red blood cell swelling, while plasma [K+] decreased. In contrast, the heart rate of whitefish plummeted following the combination of brailing (i.e. to haul in fish with a brail/net) and CO2 exposure prior to slaughter, while plasma cortisol, glucose and [Ca2+] significantly increased. An unforeseen finding concerns the substantial and long-lasting physiological stress response observed in whitefish when held in close proximity (i.e. within ~10 m) to a rainbow trout net pen, as the mean heart rate of whitefish increased from ~32 to 43 beats min−1 (i.e. an increase of ~34%). This may represent an innate physiological response to the threat of predation, which consequently increases the allostatic load and energetic expenditure of whitefish when farmed alongside salmonids. To conclude, this study highlights the importance of performing long-term, species-specific evaluations of freely swimming fish in real aquaculture settings, and provides a platform for further research aiming to determine the welfare implications of simultaneously farming predatory and prey species in close proximity.

Feed Supplementation with a Commercially Available Probiotic Solution Does Not Alter the Composition of the Microbiome in the Biofilters of Recirculating Aquaculture Systems.

Recirculating aquaculture relies on the treatment of ammonia compounds from the water by a bacterial flora growing inside biofilters. Another increasingly common practice in aquaculture is the supplementation of feed with live probiotic bacteria to boost the immune system of the farmed animals and hinder the implantation of pathogenic bacteria. In the present study, we investigated the bacterial flora within the biofilters of recirculating farming units in which African catfish (Clarias gariepinus) were being farmed. Our results suggested that these two farming systems could be compatible as feeding of the probiotic feed had no detectable effect on the composition of the microbiome within the biofilters and none of the bacteria from the feed could be detected in the biofilters. These findings suggest that supplementation of the fish feed with probiotic supplements did not interfere with the microbiome residing inside the biofilter and that it is a safe practice in recirculating aquaculture systems.

Effects of air exposure time and temperature on physiological energetics and oxidative stress of winged pearl oyster (Pteria penguin)

The winged pearl oyster (Pteria penguin) is one of the most potential species used to produce large sized pearls. Waterless transport and nuclei implant process are two common handling practices for pearl oyster in aquaculture. These processes can cause air exposure stress. In order to investigate the physiological energetics and oxidative stress of pearl oysters exposed to air, live P. penguin were exposed to air for 6 h, 9 h and 12 h at different air temperatures (20 °C, 25 °C and 30 °C) before immediate re-immersing in seawater at 27 °C for their recovery. The air exposure time and temperature significantly affected the survival rates of P. penguin. Meanwhile, the optimum temperature was found to be 25 °C, in which the survival rate of P. penguin was >90 % after 9 h of air exposure. In addition, five parameters of physiological energetics, such as clearance rate (CR), ingestion rate (IR), absorption efficiency (AE), respiration rate (RR), and ammonia excretion rate (AR) were significantly influenced by air exposure. When the duration of air exposure increased, simultaneous decrease in CR, IR and AE, and increase in RR and AR were observed. After re-immersing into seawater, these parameters of P. penguin exposed to less time (6 h or 9 h) and suitable temperature showed normal level after 96 h or less. Further, the air exposure influenced the activities of superoxide dismutase (SOD), catalase (CAT), total antioxidant capacity (T-AOC), glutathione peroxidase (GSH-Px), and malondialdehyde (MDA) content in hepatopancreas and hemolymph. SOD activities increased after air exposure, and stabilized thereafter. After 6 h of air exposure, activities of CAT, T-AOC and GSH-Px rapidly increased, before gradually decreasing. There were no significant differences in the MDA content of hepatopancreas after 6 h and 9 h of air exposure, however, significant differences were observed after 12 h of air exposure. MDA contents in hemolymph showed significant increase after 9 h and 12 h of air exposure. In this study, it was demonstrated that the air exposure associated with common aquaculture practices strongly affected the physiological energetics and oxidative stress of P. penguin. This showed that excessive air exposure (unfavorable temperature and long duration) might lead to irreversible injures in P. penguin.

Protein changes as robust signatures of fish chronic stress: a proteomics approach to fish welfare research

BackgroundAquaculture is a fast-growing industry and therefore welfare and environmental impact have become of utmost importance. Preventing stress associated to common aquaculture practices and optimizing the fish stress response by quantification of the stress level, are important steps towards the improvement of welfare standards. Stress is characterized by a cascade of physiological responses that, in-turn, induce further changes at the whole-animal level. These can either increase fitness or impair welfare. Nevertheless, monitorization of this dynamic process has, up until now, relied on indicators that are only a snapshot of the stress level experienced. Promising technological tools, such as proteomics, allow an unbiased approach for the discovery of potential biomarkers for stress monitoring. Within this scope, using Gilthead seabream (Sparus aurata) as a model, three chronic stress conditions, namely overcrowding, handling and hypoxia, were employed to evaluate the potential of the fish protein-based adaptations as reliable signatures of chronic stress, in contrast with the commonly used hormonal and metabolic indicators.ResultsA broad spectrum of biological variation regarding cortisol and glucose levels was observed, the values of which rose higher in net-handled fish. In this sense, a potential pattern of stressor-specificity was clear, as the level of response varied markedly between a persistent (crowding) and a repetitive stressor (handling). Gel-based proteomics analysis of the plasma proteome also revealed that net-handled fish had the highest number of differential proteins, compared to the other trials. Mass spectrometric analysis, followed by gene ontology enrichment and protein-protein interaction analyses, characterized those as humoral components of the innate immune system and key elements of the response to stimulus.ConclusionsOverall, this study represents the first screening of more reliable signatures of physiological adaptation to chronic stress in fish, allowing the future development of novel biomarker models to monitor fish welfare.

Life in captivity: varied behavioural responses to novel setting and food types in first-generation hybrids of farmed and wild juvenile Chinook salmon (Oncorhynchus tshawytscha)

Aquaculture practices continuously seek to improve efficiency to produce larger fish at lower cost. Selective breeding within brood stocks can result in undesirable effects, promoting hatcheries to use outbreeding to increase or maintain genetic diversity. This practice however, could result in the introduction of wild behavioural phenotypes unable to adapt to captive-living conditions. Using four hatchery first-generation hybrid crosses and two fully domesticated stocks of Chinook salmon (Oncorhynchus tshawytscha) in British Columbia, we examined behavioural responses to common aquaculture practices such as abrupt environmental change and novel feed types in juvenile fish. Controlling for mass, we found crosses varied in their behaviours to a novel setting and preferences for natural versus commercial diets. These differences were furthermore associated with rearing environment and stock-level growth rate and body size. Our results suggest selecting for phenotypes that behaviourally exhibit better coping mechanisms and greater flexibility in response to change is possible, and when in combination with growth metrics, should be an integral part of producing the desired farmed fish. Behaviours that allow commercial anadromous fish to easily transition to captive environmental conditions can benefit production and also animal welfare.

Prospects and pitfalls of using heart rate bio-loggers to assess the welfare of rainbow trout (Oncorhynchus mykiss) in aquaculture

Investigating real-time stress responses during common aquaculture practices is necessary for improving the welfare of farmed fish. Recently, Star-Oddi DST milli-HRT bio-loggers capable of measuring heart rate (as an indicator for stress) in freely swimming fish have proved to be useful in this regard. However, despite the growing popularity of these devices, they have not yet been stringently evaluated and validated for use in fish. The present study is the first to do so by simultaneously recording heart rate of a commercially important salmonid species (rainbow trout, Oncorhynchus mykiss) using the abovementioned bio-loggers, as well as an established non-invasive wireless heart rate recording technique that has been demonstrated to provide more accurate recordings than those collected using traditional methods requiring a physical connection to recording equipment. The measurement error of the bio-loggers was <1 beat min−1 irrespective of the sampling period when only using measurements graded with the highest quality index (QI0) and it is advised that only QI0 measurements be used as inclusion of poorer quality measurements (QI1–3) markedly reduce measurement accuracy. Furthermore, sufficiently long recovery periods should be employed prior to collecting data with these devices in salmonids, as anaesthesia and surgical implantation of bio-loggers resulted in transiently elevated resting heart rates for >72 h. Following the successful validation of these bio-loggers, the effects of common aquaculture practices such as netting, grouping and enforced activity on the cardiac performance of freely swimming rainbow trout were investigated. Prior to the subsequent exposure to the abovementioned stressors, mean heart rates of trout were ~42 beats min−1. Following netting, trout increased heart rates by 57%, which recovered within 3 h. Grouping subsequently induced a more pronounced and prolonged stress response, as heart rates initially increased by 86% and then remained elevated throughout the 8 h recovery period. Consequently, trout were only able to further increase heart rates by 7% following enforced activity. This diminished cardiac response demonstrates a situation where the cumulative allostatic load induced by prior stressors is approaching a level where the animal struggles to perform normal physiological processes in the face of further challenges. These findings are important for the aquaculture industry as exposure to multiple stressors without sufficient recovery times has the potential to result in the collapse of cardiac scope, which combined with unfavourable environmental conditions could lead to increased mortality.

Transport and Recovery of Gilthead Sea Bream (Sparus aurata L.) Sedated With Clove Oil and MS222: Effects on Oxidative Stress Status.

The use of anesthesia is a common practice in aquaculture to sedate fish and mitigate handling stress. Although the employ of anesthesia is considered beneficial for fish, as it reduces stress and improves welfare, at the same time it may induce hazardous side-effects. The aim of the present study was to investigate the effects of clove oil (CO) and tricaine methanesulfonate (MS222), two of the most used anesthetics, on several oxidative stress related parameters in gilthead sea bream (Sparus aurata), as these types of effects of anesthetics have been seldom investigated. To assess these effects, S. aurata juveniles were placed in a setup of mobile water tanks and were transported during 6 h with either 2.5 mg/L CO or 5 mg/L MS222. After transport, half of the fish were sampled, whereas the remaining fish were transferred to tanks without anesthetics where they were allowed to recover for 18 h before sampling. Changes in the expression levels of several target genes related with the antioxidant response and cell-tissue repair were evaluated in the gills, liver and brain. Those transcripts included glutathione peroxidase 1 (gpx1), catalase (cat), glutathione S-transferase 3 (gst3), glutathione reductase (gr), superoxide dismutase [Zn] (sod2), heat shock protein-70 (hsp70), and metallothionein (mt). Antioxidant enzymatic activities glutathione S-transferase, GST; catalase, CAT; and glutathione reductase, GR, levels of non-enzymatic antioxidants (non-protein thiols – NPT), and pro-oxidative damage, assessed as lipid peroxidation (LPO), were determined in gills, liver and brain. Acetylcholinesterase activity (AChE) was determined in plasma, gills, brain, muscle and heart as an indicator of neuro-muscular alterations. In plasma, the total antioxidant capacity (TAC) and total oxidative status (TOS) were also measured. Results showed that the use of both anesthetic agents, CO and MS222, interferes with fish antioxidant status. All tested biological matrices displayed alterations in antioxidant endpoints, confirming that these substances, although minimizing the effects of transport stress, may have long term effects on fish defenses. This result is of high relevance to aquaculture considering that the oxidative stress, may increase the susceptibility to different environmental or biotic stress and different types of pathologies.

Fluctuating salinity effect onSphoeroides annulatus(Jenyns 1842) physiological responses

Euryhaline fish, such as the Bullseye puffer Sphoeroides annulatus (Jenyns 1842), experience sudden salinity changes in their natural environment, which is more common than the exception, so they must adapt to survive and cope with extreme salt conditions. Therefore, Bullseye puffer juveniles were exposed to short-term stress (39 hr) by fluctuating salinity conditions (41, 35, 29, 23, 17, 11, 5, 11, 17, 23, 29, 35, 41 psu) with a 3-hr interval between each point at 26 ± 1ºC in a respirometer chamber and acclimation reservoirs. Responses to oxygen consumption rate (OCR: 23–35 mg O2 h–1 kg–1), ammonium excretion rate (AER: 1–1.85 mg NH4+ h−1 kg−1), oxygen-nitrogen atomic ratio (O:N 17–30), osmoregulatory pattern (blood osmotic pressure from 342.4 to 332.8 mmol/kg) and changes in expression levels of Na+/K+-ATPase in the gills (higher values at higher salinities) were measured. Although some signs of stress were detected below the iso-osmotic point (11.4 psu), the puffer fish is a strong euryhaline fish that survives under these conditions. Nonetheless, it could recover when salinity returned to the initial acclimation point because Sphoeroides annulatus is able to live in a wide range of environments with wide natural salinity fluctuations; thus, a common practice in aquaculture has been to expose fish to low salinity for several reasons discussed in this study. This capacity reveals its high plasticity to saline adaptation from 41 to 5 psu an up from 5 to 41 psu, all in less than 2 days.

Gene expression during different periods of the handling-stress response in Pampus argenteus

Common aquaculture practices subject fish to a variety of acute and chronic stressors. Such stressors are inherent in aquaculture production but can adversely affect survival, growth, immune response, reproductive capacity, and behavior. Understanding the biological mechanisms underlying stress responses helps with methods to alleviate the negative effects through better aquaculture practices, resulting in improved animal welfare and production efficiency. In the present study, transcriptome sequencing of liver and kidney was performed in silver pomfret (Pampus argenteus) subjected to handling stress versus controls. A total of 162.19 million clean reads were assembled to 30 339 unigenes. The quality of the assembly was high, with an N50 length of 2 472 bases. For function classification and pathway assignment, the unigenes were categorized into three GO (gene ontology) categories, twenty-six clusters of eggNOG (evolutionary genealogy of genes: non-supervised orthologous groups) function categories, and thirty-eight KEGG (Kyoto Encyclopedia of Genes and Genomes) pathways. Stress affected different functional groups of genes in the tissues studied. Differentially expressed genes were mainly involved in metabolic pathways (carbohydrate metabolism, lipid metabolism, amino-acid metabolism, uptake of cofactors and vitamins, and biosynthesis of other secondary metabolites), environmental information processing (signaling molecules and their interactions), organismal systems (endocrine system, digestive system), and disease (immune, neurodegenerative, endocrine and metabolic diseases). This is the first reported analysis of genome-wide transcriptome in P. argenteus, and the findings expand our understanding of the silver pomfret genome and gene expression in association with stress. The results will be useful to future analyses of functional genes and studies of healthy artificial breeding in P. argenteus and other related fish species.

The final countdown: Continuous physiological welfare evaluation of farmed fish during common aquaculture practices before and during harvest

Welfare of farmed fish has become of increasing concern for consumers, producers, interest groups and authorities. To improve fish welfare, it is necessary to find indicators that can identify stressful situations early enough so that an intervention can take place before detrimental effects occur. By using heart rate bio-loggers in freely swimming rainbow trout (Oncorhynchus mykiss), combined with plasma cortisol levels and a range of haematological and blood chemistry parameters, we assessed the severity of stress responses induced by a range of common aquaculture practices before and during harvest. Following surgery, transportation and reintroduction with conspecifics in the sea cage, it took ~4 days for heart rate to stabilize and for a clear circadian rhythm in heart rate to emerge (i.e. average circadian fluctuation in heart rate of ~25 to 27 beats min−1). The presence or absence of this circadian rhythm in heart rate could inform researchers in the aquaculture industry whether or not specific farming routines induce unnecessary and prolonged stress. The elevations in heart rate caused by common farming practises such as crowding and transportation (e.g. heart rate increased by ~8 and 9 beats min−1 above what would normally be expected for that time of day, respectively) corresponded well with increases in plasma cortisol levels. Stressful farming practises or events (indicated by elevated plasma cortisol levels) such as air exposure during brailing and aquatic hypoxia triggered a hypoxic bradycardia until fish were released back into oxygenated water whereupon heart rate significantly increased to repay the accumulated oxygen debt. Repeated stress induced by multiple farming practises (i.e. combined stressors of crowding, brailing and transportation) clearly had a cumulative and long-lasting effect as heart rate peaked at ~25 beats min−1 above what would normally be expected for that time of day. Heart rate also remained significantly elevated by ~9 beats min−1 the following morning, suggesting that if rainbow trout need to be subjected to multiple stressors during consequtive days, it is recommended that sufficient time for recovery is provided between stressors. This study demonstrates that heart rate monitoring can be useful to assess stress levels of freely swimming fish in sea cages. Moreover, the use of implantable bio-loggers opens up a broad range of possible applications that will allow researchers to investigate the effects of environmental and/or anthropogenic stressors on the welfare of fish under conditions more realistic to the aquaculture industry.

A time course study of glucose levels and innate immune response in gilthead seabream (Sparus aurata L.) after exposure to clove oil-eugenol derived anaesthetic

Clove oil is used as an anaesthetic for many species of fish worldwide; however, relatively few studies have assessed its effects on the innate immune response on these species. The present work aimed to investigate the effects of clove oil-eugenol derived anaesthetic on some humoral and cellular immune response in gilthead seabream (Sparus aurata L.). To compare with an unexposed control group, fish were exposed to 55 ppm clove oil for 5 min, before being sampled at 1, 24 and 48 h post-exposure. Serum glucose level was also measured to obtain information on the fish physiological response after clove oil anaesthesia. One hour after exposure the haemolytic complement activity of fish was lower than in the unexposed group. By contrast, the leucocyte peroxidase activity in head-kidney was significantly stimulated 24 h after exposure to clove oil-eugenol. The rest of innate immune parameters evaluated and the glucose levels not were affected by clove oil exposure at any sampling point. Overall, the use of clove oil at 55 ppm as anaesthetic did not seem to alter the innate immune response and neither did it trigger a stress response. The use of clove oil-eugenol derived had become common practice in aquaculture, and its use with gilthead seabream can be considered safe as it does not cause immunodepression in anesthetized fish.

Influence of oxytetracycline on the fate of Nitrogen species in a recirculating aquaculture system

Common aquaculture practices include the use of certain pharmaceuticals such as antibiotics in avoiding diseases and promoting a healthier growth of the culture. The aim of this study is to monitor and assess the influence of different low oxytetracycline concentrations on the transformation of nitrogen compounds under aeration condition in a lab-scale recirculating aquaculture system (RAS). Over 1 mg L-1 dose of oxytetracycline to aquaculture had induced ammonia(NH4-N), nitrate(NO3-N), soluble COD accumulation in RAS. In addition, nitrous oxide (N2O) emission from RAS was significantly reduced during the oxytetracycline dose periods. After ceasing the dose of oxytetracycline, ammonia oxidation and nitrous oxide re-emission were observed. This observation indicated that low concentrations of oxytetracycline could affect the nitrogen species in RAS. Also, the emission mechanisms of N2O may not be only dependent on nitrification process but also dependent on denitrification process in our RAS system.

Determination of optimal degree days of fasting before slaughter in rainbow trout (Oncorhynchus mykiss)

Pre-slaughter fasting is a common practice in aquaculture to ensure emptying of the digestive tract, but little is known about how long fish should be fasted, in terms of degree days (°Cdays), to clear the gut without affecting their welfare or flesh quality. In this study, 180 rainbow trout (Oncorhynchus mykiss) were fasted for 3, 4, 5, 6, 7 and 9days (17.2, 22.3, 28.6, 35.3, 41.8 and 55.3°Cdays, respectively) and different morphometric, hematological and flesh quality parameters were measured. The slaughter weight, relative growth and hepato-somatic index did not decrease until after 7days of fasting (41.8°Cdays) and stomach content was similar and near zero after 4days of fasting (22.3°Cdays). Conversely, fasting time increased carcass yield. Plasma concentrations of cortisol, glucose and creatine phosphokinase enzyme were lower with increasing days of fasting. However, trout slaughtered after 5days of fasting (28.6°Cdays) had a higher flesh pH at 0h post-mortem than 3 and 4days fasted trout and, consequently, earlier establishment of rigor mortis. Furthermore, liver color could be useful as a stress indicator since its hue decreases after 5days of fasting (28.6°Cdays). In conclusion, a pre-slaughter fasting period from 17.2°Cdays to 22.3°Cdays makes possible to obtain a complete emptying of the digestive system in rainbow trout and simultaneously it can minimize the stress response with consequent better flesh quality.

Effects of Acute Handling Stress on Expression of Growth‐Related Genes in Pampus argenteus

AbstractIn fish, growth and development are mainly regulated by growth hormone/insulin‐like growth factors. Common aquaculture practices subject fish to stress. To investigate the effects of acute stress on growth‐related genes in cultured fish, the expression of growth hormone receptors (ghr1 and ghr2), insulin‐like growth factor binding proteins (igfbp1, igfbp4, and igfbp5), preprosomatostatin I and II (ppss1and ppss2), somatostatin receptors (sstr2 and sstr5), myostatin (mstn1 and mstn2), and glucocorticoid receptors (gr1 and gr2) were examined in Pampus argenteus subjected to handling stress. Plasma growth hormone levels increased significantly and peaked at 12 h and then decreased significantly at 24 h after treatment (P&lt;0.05). Plasma cortisol and glucose concentrations in stressed fish began to increase significantly at 2 and 6 h after treatment, respectively. Real‐time quantitative polymerase chain reaction analysis showed that hepatic ghr2 mRNA levels in liver and muscle decreased sharply in response to the stressor. Igfbp1, 4, and 5 mRNA expressions in muscle also decreased sharply after exposure, while expression of ppss1, sstr2, and mstn2 increased significantly. This study showed that acute handling stress can affect expression of growth‐related genes in P. argenteus. Our findings could be helpful for the further study on response to stress in this species.

Effect of assortative mating on genetic gain and inbreeding in aquaculture selective breeding programs

In this simulation study, the effect of the mating scheme on genetic gain and inbreeding has been explored for aquaculture selection programs where tank effects and large family sizes are common. Different selection methods were investigated (individual, family, sib, combined and within-family selection). Our results suggest that under family and sib selection, genetic gain was increased with assortative mating in comparison to random mating. The advantage of assortative mating increased when common environmental effects were present. Contrarily, a decrease in genetic gain was observed with disassortative mating, except for the case of within-family selection. The advantage of assortative mating over random mating was due to the increase in the between-family component of the additive genetic variance that was exacerbated with the presence of common environmental effects. Under family and sib selection, the join effect of assortative mating and common environmental effects produced an increase in genetic gain of around 80 and 40% at early generations, and around 10 and 60% at later generations, respectively. Inbreeding was low under family selection for all mating schemes but much higher under sib selection when assortative mating was performed. In fact, the inbreeding coefficient after 10 generations of selection was 300% higher when assortative matings were performed under sib selection, compared to random matings. This was due to the fact that under sib selection, matings were based on family means, leading to an increased frequency of within-family matings. To our knowledge, this is the first study that investigates the effect of the mating scheme on genetic gain and inbreeding in an aquaculture context where family sizes are large and tank effects are present, and shows that assortative mating can substantially enhance the response to selection, particularly when family selection methods are applied. Statement of relevanceOur article complies with the Policy Statement for submission of manuscripts to the Genetics Section, as it provides insight into the issue of breeding programs. Here, we have connected previous work in the field to address new questions, focusing on how the mating scheme may affect both genetic gain and inbreeding in aquaculture selection programs, where family sizes are typically large and tank effects are usually present.In fish species, it is possible to consider different mating schemes because fecundity is high and because in vitro fertilization is often possible. A particular problem in aquaculture breeding programs is the impossibility of tagging physically newborn individuals. Given this, a common practice in aquaculture is to rear families in separate tanks until the fish are large enough to be individually tagged. This introduces an environmental effect common to the members of the same family (tank effect) which can lead to a reduction of the response to selection that needs to be considered.We studied here the efficiency of different selection methods in terms of genetic gain and inbreeding and investigated the effect of the mating scheme to optimize breeding programs in aquaculture when tank effects are present. We have shown that assortative mating can substantially enhance the response to selection, particularly when family selection methods are applied and tank effects are present. To our knowledge, the effect of the mating scheme in an aquaculture context has never been addressed before. Our results suggest that assortative mating in the presence of common environmental variance may be considered in selection programs in aquaculture. Our conclusions will help breeders make optimal mating choices.

Impact of sperm DNA damage and oocyte-repairing capacity on trout development.

Zygotic repair of paternal DNA is essential during embryo development. In spite of the interest devoted to sperm DNA damage, its combined effect with defect-repairing oocytes has not been analyzed. Modification of the breeding season is a common practice in aquaculture. This practice reduces developmental success and could affect the both factors: sperm DNA integrity and oocyte repair capacity. To evaluate the maternal role, we analyzed the progeny outcome after fertilizing in-season trout oocytes with untreated and with UV-irradiated sperm. We also analyzed the offspring obtained out of season with untreated sperm. The analysis of the number of lesions in 4 sperm nuclear genes revealed an increase of 1.22-11.18 lesions/10 kb in out-of-season sperm, similar to that obtained after sperm UV irradiation (400 µW/cm(2)5 min). Gene expression showed in out-of-season oocytes the overexpression of repair genes (ogg1, ung, lig3, rad1) and downregulation of tp53, indicating an enhanced repairing activity and reduced capacity to arrest development upon damage. The analysis of the progeny in out-of-season embryos revealed a similar profile tolerant to DNA damage, leading to a much lower apoptotic activity at organogenesis, lower hatching rates and increased rate of malformations. The effects were milder in descendants from in-season-irradiated sperm, showing an enhanced repairing activity at epibolia. Results point out the importance of the repairing machinery provided by the oocyte and show how susceptible it is to environmental changes. Transcripts related to DNA damage signalization and repair could be used as markers of oocyte quality.