Common Bean Varieties Research Articles

Agronomic and Economic Evaluation of Common Bean-Tef in Double Cropping System

Double-cropping of cereals with legumes is a usual practice by small-holder farmers in southern parts of Ethiopia but crop compatibility and sequencing are the major problems for their soil fertility as well as profitability. Thus, it was important to conduct research on double cropping systems that can make the farmers more profitable on small land to reduce crop failure with current climate change. Thus, an experiment was done to evaluate the effects of these crops as double cropping on the productivity of tef and to evaluate the agronomic and economic value of common bean-tef in double cropping system for an improved production system at Shashemene district during the cropping season of 2022 and 2023 using RCBD design. The experiment consisting of twelve treatments including one common bean and three N rate with three tef varieties was sowed as the preceding and succeeding crop respectively and three sole tef varieties used as a control. The preceding crop the Hawassa dume common bean variety had 8 ton/ha dry biomass and 35 Qt/ha grain yield. The variance analysis showed that all the growth and yield parameters of tef except harvest index were significant such as Plant Height, Panicle Length, Straw Yield, Biomass yield, Grain Yield (p<0.05).

Exploring common bean's defense arsenal: Genome-wide characterization of PR-1 gene family and its transcriptional response to Colletotrichum lindemuthianum inoculation

Pathogenesis-related Protein 1 (PR-1) plays a crucial role in plant defense responses, particularly against fungal pathogens. Despite its significance, comprehensive studies characterizing this gene family in the common bean (Phaseolus vulgaris) are currently lacking. Therefore, the objective of this study was to conduct genomic mining and characterization of the PR-1 in common bean (PvPR-1) genome. Additionally, we assessed the transcriptional expression of all its isoforms in response to inoculation with the fungus Colletotrichum lindemuthianum. This evaluation was performed on leaf tissue samples obtained from both sensitive (Rosinha) and resistant (Africano 4) common bean varieties at 24-, 48-, and 96-hours post inoculation. Thirteen PvPR-1 genes were consistently identified, forming two major clusters across the clustering analyses. Physicochemical characterization indicated that the PvPR-1 proteins are predominantly basic, hydrophilic, and extracellularly localized. Moreover, their promoter regions contain putative cis-regulatory elements that respond to a broad spectrum of plant hormones, including jasmonic acid, gibberellin, and ethylene, which are key regulators of both biotic and abiotic stress responses. This discovery implies a multifaceted role for the studied proteins in common bean physiology. KEGG pathway analysis implicated PvPR-1 proteins in hormonal signaling (corroborating the anchored cis-regulatory elements) and plant-pathogen interaction networks. Secondary structure evaluation revealed the predominance of α-helices and coiled structures within these proteins. Subsequent 3D modeling demonstrated a conserved ‘α-β-α’ sandwich architecture characterized by a central cavity. This structural motif suggests potential functional versatility, particularly in pathogen recognition and responses. Additionally, the study provided insight into the potential interactions of PvPR-1 with Chitinase II (PR-3) and Rab-18, as suggested by the STRING platform. Temporal differences in PvPR-1 gene expression were observed between the common bean contrasting varieties following C. lindemuthianum inoculation. Africano-4, the resistant one, showed a higher abundance of up-regulated and constitutively expressed PvPR-1 transcripts compared to its sensitive counterpart (Rosinha), indicating a more effective role of this gene family against the pathogen. Furthermore, based on PCA analyses and interaction networks of differentially expressed genes, three key targets within the PvPR-1 family (PvPR-1-4, PvPR-1-5, and PvPR-1-10) emerged as promising candidates for future functional characterization. These molecular actors displayed differential transcriptional patterns between the studied varieties without compromising the transcript abundance of PvPR-1 protein synthesis in the resistant one. Consequently, they may represent key components of resistance mechanisms that contribute to the differentiation between the two organisms. These findings deepen our understanding of PvPR-1 genes and their roles in common bean defense responses. They also emphasized the potential of PvPR-1 genes as candidates for breeding stress-resistant common bean varieties, which are crucial for bolstering crop resilience to environmental adversities.

Northwestern Himalayan common beans: A Treasure Trove for breeding resistant bean cultivars for multiple foliar pathogens

Common bean (Phaseolus vulgaris. L) is attacked by a lot of important foliar diseases like anthracnose, Bean Common Mosaic Virus, angular leaf spot, Bean Golden Yellow Mosaic Virus, and common bacterial blight. In the present study, we exploited anthracnose resistant germplasm of 122 common bean genotypes for the identification of broad spectrum and durable resistance for multiple foliar diseases. We utilized linked molecular markers and found some promising genotypes with 11 resistance genes. These genotypes possess significant potential as parental lines for gene pyramiding strategies, to enhance disease resistance in common beans. We also highlighted the need for new generation markers over SCAR markers to streamline genotypic screening and expedite the breeding of disease-resistant common bean varieties. Our phenotypic studies identified a few bean landraces highly resistant to the new BCMV NL-1n strain. Consequently, the genome wide association study also confirms the presence of already identified resistance genes. Additionally, our study reconfirms the presence of the recently identified bc-urgene in our material. The bean landraces of northern India contain novel regions associated with BCMV resistance on Pv03, Pv05, Pv04, Pv06, Pv07, Pv09, and Pv11. This study provides the list of bean genotypes that can be used to breed resistant cultivars and may also contain new resistance genes to a most important viral disease of common beans.

Cooking Time, Seed Darkening, and Iron and Zinc Concentrations of Selected Andean Genotypes of Common Bean

ABSTRACTCooking time (CT), post‐harvest darkening (PHD), and micronutrient content influence consumer preference of common bean (Phaseolus vulgaris L.) varieties. The objective of this study was to evaluate Andean genotypes for CT, PHD, and seed iron and zinc concentration. A total of 52 genotypes belonging to three market classes, namely, purple‐speckled (Kabulangeti), yellows, and cranberry (sugar beans), were grown at the Golden Valley Agricultural Research Trust (GART) Farm and the Mpika Research Farm in Zambia and assessed for CT, PHD, and seed iron and zinc concentration. The fastest cooking genotype among all 52 genotypes was a yellow genotype, Y1612‐5. Yellow genotypes generally cooked faster than the Kabulangeti and sugar types. Among the elite lines with Kabulangeti seed types, which is a dominant market class in Zambia, the elite line K175 had faster CT and higher iron and zinc concentration than the Kabulangeti landrace race currently available on the Zambian market. Kabulangeti and sugar genotypes showed regular darkening, whereas yellows did not darken. The yellow genotype Y1612‐3 was particularly outstanding because of its unique combination of high concentrations of both iron and zinc. Therefore, it can be used to introgress these two essential minerals into variable genetic backgrounds. The significant variability and high to moderate heritability for CT (0.85) and iron (0.81) and zinc (0.58) concentration observed in the current study suggest that it is possible to make progress in breeding for faster cooking varieties that are rich in iron and zinc.

Biochemical Defense Arsenal, Genes/QTLs and Transcripts for Imparting Anthracnose Resistance in Common bean (Phaseolus vulgaris L.)

Anthracnose (ANT), caused by Colletotrichum lindemuthianum, is the most devastating disease affecting common bean (Phaseolus vulgaris L.), leading to significant yield losses in the Western Himalayas. The study provides a comprehensive understanding of ANT resistance via trait phenotyping, biochemical profiling, genome-wide association studies (GWASs), and RNA sequencing. The assessment of bean association mapping panel in different environments revealed a diverse spectrum of resistance levels. Biochemical analysis revealed distinctive defense responses against ANT infection among different genotypes. GWAS approach identified 24 significant marker‒trait associations (MTAs) distributed across all 11 bean chromosomes. Notably, 03 MTAs (BMr205, BMr269 and BMr244) present on chromosome Pv07 were validated for ANT, and the remaining MTAs were novel MTAs for ANT. Transcriptome sequencing of resistant (PBG-3) and susceptible (PBG-26) genotypes under mock and 120-hour post inoculation conditions revealed key differentially expressed genes, such as leucine-rich repeat domain-containing protein (PHAVU_007G087700g), NB-ARC domain-containing protein (PHAVU_003G002500g) and transcription factors pivotal for disease resistance. The expression patterns of four genes (PHAVU_007G087700g, PHAVU_003G002500g, PHAVU_007G056100g and PHAVU_003G003000g) were validated through quantitative reverse transcription polymerase chain reaction (qRT‒PCR). Furthermore, the integration of GWAS-identified candidate genes with transcriptomics and cross-referencing with previous studies validated overlapping regions and common candidate genes, enriching our understanding of the genetic basis of ANT resistance. Therefore, the results offer a holistic perspective on ANT resistance in common bean, providing a foundation for targeted breeding efforts. The identified potential candidate genes and associated pathways will contribute valuable insights into the development of ANT resistant common bean varieties.

Adaptation, Path Coefficient and Correlation Study of Yield and Associated Traits in Common Bean (Phaseolus vulgaris L.) Genotypes

The study evaluated new biofortified, high-yielding and disease-resistant bean varieties for their adaptability in Zimbabwe. The secondary objective was to assess the association between yield and other traits that contribute to grain yield and identify traits that have direct and indirect effects on grain yield. The study was conducted between December 2016 and June 2017 using an augmented design with 24 varieties replicated three times at Chinhoyi University of Technology Research Farm. Data was analysed using analysis of variance in the statistical analysis system (SAS) software. DAB482, DAB494 and DAB539 were identified as high-yielding varieties with desired disease tolerance to common bean blight (CBB), common leaf rust (CLR) and angular leaf spot). Therefore, these improved common bean varieties recommended for further multilocation evaluation with the potential to be released as commercial varieties. Correlation coefficient values and path analysis values (direct and indirect) showed that the weight of 100 randomly selected seeds per variety and the percentage number of plants that germinated per plot could be used for indirect selection for grain yield (kg/ha). A negative correlation indicates an inverse relationship between traits. This study observed significant negative correlations for CBB and CLR relative to grain yield (kg/ha). This suggests that the grain yield (kg/ha) decreases with increased disease incidence and severity, highlighting the importance of disease tolerance in achieving high grain yield. Hence, there is a need for the breeding program to select and advance varieties that are tolerant to diseases to achieve the desired improvement in grain yield performances.

Comparative Genomic Analyses of Colletotrichum lindemuthianum Pathotypes with Different Virulence Levels and Lifestyles.

Colletotrichum lindemuthianum is the most frequent pathogenic fungus of the common bean Phaseolus vulgaris. This filamentous fungus employs a hemibiotrophic nutrition/infection strategy, which is characteristic of many Colletotrichum species. Due to host-pathogen coevolution, C. lindemuthianum includes pathotypes with a diversity of virulence against differential common bean varieties. In this study, we performed comparative genomic analyses on three pathotypes with different virulence levels and a non-pathogenic pathotype, isolated from different geographical areas in Mexico. Our results revealed large genomes with high transposable element contents that have undergone expansions, generating intraspecific diversity. All the pathotypes exhibited a similar number of clusters of orthologous genes (COGs) and Gene Ontology (GO) terms. TFomes contain families that are typical in fungal genomes; however, they show different contents between pathotypes, mainly in transcription factors with the fungal-specific TF and Zn2Cys6 domains. Peptidase families mainly contain abundant serine peptidases, metallopeptidases, and cysteine peptidases. In the secretomes, the number of genes differed between the pathotypes, with a high percentage of candidate effectors. Both the virulence gene and CAZyme gene content for each pathotype was abundant and diverse, and the latter was enriched in hemicellulolytic enzymes. We provide new insights into the nature of intraspecific diversity among C. lindemuthianum pathotypes and the origin of their ability to rapidly adapt to genetic changes in its host and environmental conditions.

Use of Bayesian probabilistic model approach in common bean varietal recommendation

AbstractRecommendation of new varieties is supported by value for cultivation and use (Valor de Cultivo e Uso [VCU]) trials. For a more reliable recommendation, it is necessary to identify methodologies that make better use of the genotype‐by‐environment interaction (GEI). The methodology proposed by Dias et al. is an alternative to take advantage of the GEI; it considers concepts of Bayesian models and probability methods of adaptation and stability analysis in a single model, classifying the genotypes regarding possible success based on a defined selection intensity. Thus, the aim of the present study was to explore the use of Bayesian probabilistic method for the purpose of recommend common bean (Phaseolus vulgaris L.) varieties. To that end, we used grain yield data from 15 genotypes of common bean evaluated in 42 environments distributed over different crop seasons, years, and locations in regard to VCU trials conducted from 2016 to 2018. Under a predefined selection intensity of 30%, the genotypes with greater marginal probability of superior performance were G01, G14, G07, G11, and G02. The genotypes with greater marginal probability of superior stability were G06, G07, G04, G03, and G12. Considering the joint probability of superior performance and yield stability, the genotypes G07, G14, G01, G11, and G04 stand out. Therefore, the use of the Bayesian probabilistic method showed promise in recommendation of common bean varieties.

Agronomic Evaluation of Common Bean and Tef (Eragrostis tef) Varieties in Double Cropping System

Double-cropping cereals with legumes is a usual practice by smallholder farmers in southern Ethiopia. However, crop compatibility and sequencing are the major problems for their soil fertility and profitability. Thus, it was useful to conduct experiments on double cropping systems that enable the farmers more profitable on small land to reduce crop failure with current climate change. Thus, an experiment was done to evaluate the effects of the common bean as double cropping on the productivity of tef and to evaluate the economic and technical compatibility of common bean-tef in a double cropping combination to improve production at Wondo Genete district during the cropping season of 2021 using RCBD design. The experiment consisting of twelve treatments including three common bean and three tef varieties was sowed as the preceding and succeeding crop respectively and three sole tef variety to see the compatibility of common bean and tef varieties. The preceding crops showed a non-significant difference in days to maturity, seed per pod, and hundred seed weight, but the biomass and grain yield of Remeda were significantly higher than Awash-2 however, it had no significant yield difference with Hawassa Dume. The variance analysis showed that all the growth and yield parameters of tef were significant such as days to heading, days to maturity, plant height, spike length, number of tillers per plant, tiller number, and grain yield (p<0.05). However, the yield parameters like dry biomass, straw yield, and toughened seed weight for tef had no significant difference.

Bioaccessibility of carotenoids, tocochromanols, and iron from common bean (Phaseolus vulgaris L.) landraces

Common beans (Phaseolus vulgaris L.) are among the most important legumes for human nutrition. The aim of the present study was to characterize the composition and in vitro bioaccessibility of tocochromanols, carotenoids, and iron from 14 different landraces and 2 commercial common bean varieties. Phytic acid, dietary fiber, and total (poly)phenolic content were determined as factors that can modify the bioaccessibility of the studied compounds. Two carotenoids were identified, namely lutein (4.6–315 ng/g) and zeaxanthin (12.2–363 ng/g), while two tocochromanols were identified, namely γ-tocopherol (2.62–18.01 µg/g), and δ-tocopherol (0.143–1.44 µg/g). The iron content in the studied samples was in the range of 58.7–144.2 µg/g. The contents of carotenoids, tocochromanols, and iron differed significantly among the studied samples but were within the ranges reported for commercial beans. After simulated gastrointestinal digestion, the average bioaccessibility of carotenoids was 30 %, for tocochromanols 50 %, and 17 % for iron. High variability in the bioaccessible content yielded by the bean varieties was observed. Dietary fiber, phytic acid and total (poly)phenol contents were negatively correlated with the bioaccessibility of carotenoids, while iron bioaccessibility was negatively correlated with the total (poly)phenol content. The principal component analysis indicated that the bioaccessibility of lutein was the main variable involved in class separations. The composition of the food matrix plays an important role in the bioaccessibility of carotenoids, tocochromanols and iron from cooked beans.

Unearthing Optimal Symbiotic Rhizobia Partners from the Main Production Area of Phaseolus vulgaris in Yunnan.

Phaseolus vulgaris is a globally important legume cash crop, which can carry out symbiotic nitrogen fixation with rhizobia. The presence of suitable rhizobia in cultivating soils is crucial for legume cropping, especially in areas beyond the plant-host native range, where soils may lack efficient symbiotic partners. We analyzed the distribution patterns and traits of native rhizobia associated with P. vulgaris in soils of Yunnan, where the common bean experienced a recent expansion. A total of 608 rhizobial isolates were tracked from soils of fifteen sampling sites using two local varieties of P. vulgaris. The isolates were discriminated into 43 genotypes as defined by IGS PCR-RFLP. Multiple locus sequence analysis based on recA, atpD and rpoB of representative strains placed them into 11 rhizobial species of Rhizobium involving Rhizobium sophorae, Rhizobium acidisoli, Rhizobium ecuadorense, Rhizobium hidalgonense, Rhizobium vallis, Rhizobium sophoriradicis, Rhizobium croatiense, Rhizobium anhuiense, Rhizobium phaseoli, Rhizobium chutanense and Rhizobium etli, and five unknown Rhizobium species; Rhizobium genosp. I~V. R. phaseoli and R. anhuiense were the dominant species (28.0% and 28.8%) most widely distributed, followed by R. croatiense (14.8%). The other rhizobial species were less numerous or site-specific. Phylogenies of nodC and nifH markers, were divided into two specific symbiovars, sv. phaseoli regardless of the species affiliation and sv. viciae associated with R. vallis. Through symbiotic effect assessment, all the tested strains nodulated both P. vulgaris varieties, often resulting with a significant greenness index (91-98%). However, about half of them exhibited better plant biomass performance, at least on one common bean variety, and two isolates (CYAH-6 and BLYH-15) showed a better symbiotic efficiency score. Representative strains revealed diverse abiotic stress tolerance to NaCl, acidity, alkalinity, temperature, drought and glyphosate. One strain efficient on both varieties and exhibiting stress abiotic tolerance (BLYH-15) belonged to R. genosp. IV sv. phaseoli, a species first found as a legume symbiont.

Genome-Wide Identification and Characterization of U-Box Gene Family Members and Analysis of Their Expression Patterns in Phaseolus vulgaris L. under Cold Stress.

The common bean (Phaseolus vulgaris L.) is an economically important food crop grown worldwide; however, its production is affected by various environmental stresses, including cold, heat, and drought stress. The plant U-box (PUB) protein family participates in various biological processes and stress responses, but the gene function and expression patterns of its members in the common bean remain unclear. Here, we systematically identified 63 U-box genes, including 8 tandem genes and 55 non-tandem genes, in the common bean. These PvPUB genes were unevenly distributed across 11 chromosomes, with chromosome 2 holding the most members of the PUB family, containing 10 PUB genes. The analysis of the phylogenetic tree classified the 63 PUB genes into three groups. Moreover, transcriptome analysis based on cold-tolerant and cold-sensitive varieties identified 4 differentially expressed PvPUB genes, suggesting their roles in cold tolerance. Taken together, this study serves as a valuable resource for exploring the functional aspects of the common bean U-box gene family and offers crucial theoretical support for the development of new cold-tolerant common bean varieties.

Differential Gene Expression in Contrasting Common Bean Cultivars for Drought Tolerance during an Extended Dry Period.

Common beans (Phaseolus vulgaris L.), besides being an important source of nutrients such as iron, magnesium, and protein, are crucial for food security, especially in developing countries. Common bean cultivation areas commonly face production challenges due to drought occurrences, mainly during the reproductive period. Dry spells last approximately 20 days, enough time to compromise production. Hence, it is crucial to understand the genetic and molecular mechanisms that confer drought tolerance to improve common bean cultivars' adaptation to drought. Sixty six RNASeq libraries, generated from tolerant and sensitive cultivars in drought time sourced from the R5 phenological stage at 0 to 20 days of water deficit were sequenced, generated over 1.5 billion reads, that aligned to 62,524 transcripts originating from a reference transcriptome, as well as 6673 transcripts obtained via de novo assembly. Differentially expressed transcripts were functionally annotated, revealing a variety of genes associated with molecular functions such as oxidoreductase and transferase activity, as well as biological processes related to stress response and signaling. The presence of regulatory genes involved in signaling cascades and transcriptional control was also highlighted, for example, LEA proteins and dehydrins associated with dehydration protection, and transcription factors such as WRKY, MYB, and NAC, which modulate plant response to water deficit. Additionally, genes related to membrane and protein protection, as well as water and ion uptake and transport, were identified, including aquaporins, RING-type E3 ubiquitin transferases, antioxidant enzymes such as GSTs and CYPs, and thioredoxins. This study highlights the complexity of plant response to water scarcity, focusing on the functional diversity of the genes involved and their participation in the biological processes essential for plant adaptation to water stress. The identification of regulatory and cell protection genes offers promising prospects for genetic improvement aiming at the production of common bean varieties more resistant to drought. These findings have the potential to drive sustainable agriculture, providing valuable insights to ensure food security in a context of climate change.

Evaluation and Participatory Variety Selection of Common Bean (Phaseolus vulgaris L.) Varieties in Dawro Zone, South Western Region of Ethiopia

Farmers in the study area exhibit a unique tendency to choose varieties based on selection criteria rather than tested yields in the district. To ensure farmer participation, a study was conducted on six farmers’ farms, utilizing farmers as replicas in a Randomized Complete Block Design. Ten common bean crop varieties underwent evaluation on these farms to assess varieties in terms of farmer participation and identify priority criteria during the 2019 and 2020 production years. Plot sizes were standardized to 4m plot lengths with inter and intra-spacing of 40cm and 10cm, respectively. The seed and NPSB fertilizer rate were set at 100kg/ha and 122kg/ha, respectively. Significant differences were (P<0.05) were observed among treatments for plant height, days to 50% flowering, days to 90% maturity, and yield over two years. Notably, the common bean varieties Remeda, DAB 96, and SER 119 yielded 1641, 1601, and 1588.7kg/ha, respectively. Additionally, the farmers in the district preferred red-seeded varieties for production and consumption due to superior seed per pod, pod per plant, seed size, seed color, and seed yield. Moreover, these farmers preferred varieties established tolerance to major common bean diseases which were common in the district. Consequently, these high-yielding, farmers preferred, and disease-tolerant varieties are recommended for demonstration and large-scale production in the study regions and agro-ecological zones similar to those the trial was implemented in south western region of Ethiopia.

Diversity and Phylogeny of Symbiotic Bacteria Nodulating Common Bean (Phaseolus vulgaris L.) in Côte d’Ivoire

Phaseolus vulgaris L. (common bean) is an agriculturally important legume that benefits from a symbiosis with bacteria belonging to the genus Rhizobium. Growing interest in the use of rhizobia as biofertilizers has led to the identification of a large number of rhizobia strains and studies of their diversity. Although much research has been carried out on rhizobia, there is little data on the diversity of rhizobia associated with common bean in Côte d'Ivoire. This study assessed the species diversity of common bean nodulating bacteria in ivorian soils. This diversity was assessed based on 16S rRNA gene sequencing. Ten high-performance bacterial isolates extracted from common bean nodules were used for genetic analysis. The 16S rRNA gene sequences of the native isolates were closely affiliated with members of the genera Rhizobium, Bradyrhizobium, Allorhizobium and Sinorhizobium demonstrating the presence of a diversity of native bean nodule bacteria. This study also reports for the first time the presence of Allorhizobium taibaishanense in common bean nodules. These results constitute an important step in the development of an effective microbial inoculum and sustainable food production.

Model‐based multi‐genotype characterization of drought stress Target Population of Environments for the common bean in East Africa

AbstractEfforts toward the development of common bean varieties that can perform better under the drought conditions in Eastern Africa are constrained by significant genotype–environment–management (G × E × M) interactions. To address this, an attempt was made previously to assess drought stress for Eastern Africa using the Target Population of Environments (TPE) approach, albeit by using a single cultivar. Here, we extend earlier TPE work with a larger sample of representative genotypes from East Africa including commercial and breeding lines. By using a larger genotype pool, we are able to (1) assess the extent to which TPEs identified vary across genotypes (i.e., generality of the TPEs) and (2) identify best‐performing genotypes for the various environments identified. To perform the analyses, we used the CROPGRO‐DRYBEAN cropping system model available in the Decision Support System for Agrotechnology Transfer (DSSAT) v4.7 calibrated and evaluated from field trials in Africa and Colombia with 10 genotypes. Our findings indicate that despite some level of genotype‐related variation, the dominant drought stress patterns, and their priorities—drought stress‐free conditions remain the dominant TPE, followed by terminal drought stress—remain unaltered. Moreover, we find that it is possible to reduce the extent and intensity of drought stress in various TPEs by adequately targeting genotypes from the pool considered herein. Importantly, the genotype characteristics for stress‐free, extreme terminal drought and moderate terminal drought stress are significantly different, confirming a differentiated breeding strategy is required between the TPEs. The findings from this study are useful for the modernization of the bean breeding programs in Africa.

Effects Of Storage Container and Storage Condition on Seed Health Quality of Common Bean Variety Ennepa in Southern Ghana

Effects Of Storage Container and Storage Condition on Seed Health Quality of Common Bean Variety Ennepa in Southern Ghana

Assessment of genotypic variability and genome‐wide association analysis of cooking time and canning quality traits in common bean (Phaseolus vulgaris L.)

AbstractDeveloping improved common bean varieties with short cooking time (CT) and good canning quality traits (CQTs) is very key for accelerating bean consumption among the urban and middle‐class population. The objective of this study was to assess the genotypic variability and identify single nucleotide polymorphism (SNP) markers associated with CT and CQTs in common bean. A total of 250 common bean accessions were evaluated under field conditions for two seasons using alpha lattice design with two replications. Three months post‐harvest, the dry bean grains were evaluated for CT and CQTs. Significant variation was observed among the 250 common bean accessions tested for both traits. CT ranged from 51 to 215 min, with 11 genotypes cooking in less than 60 min. The percentage total CQTs' score ranged from 41% to 84% with 31 genotypes scoring 76% and above. Forty‐seven significant GWAS signals were detected for CT on chromosomes Pv01, Pv04, Pv05 and Pv11 and CQTs on Pv01, Pv02, Pv03, Pv04, Pv05, Pv06, Pv07, Pv08, Pv10 and Pv11, respectively. Positional candidate genes including Phvul.005G161200 on chromosome Pv05, Phvul.007G2803001 and Phvul.007G280700 on chromosome Pv07 were associated with seed coat colour retention of the canned beans. Besides their usefulness in breeding research, the identified bean genotypes with shorter CT and good CQTs could enhance bean consumption and processing industries.

Pulse Consumption and Health Outcomes: A Scoping Review

Pulses—comprising the dry, edible seeds of leguminous plants—have long been lauded for their culinary flexibility and substantial nutritional advantages. This scoping review aimed to map the evidence on how pulses contribute to overall human health. Four electronic databases were searched for clinical and observational studies in English. We identified 30 articles (3 cross-sectional studies, 1 federated meta-analysis, 8 prospective cohort studies, 1 before-and-after study, and 17 randomized controlled trials) that met our inclusion criteria. Predominant among the pulses studied were lentils, chickpeas, common bean varieties (e.g., pinto, black, navy, red, kidney), black-eyed peas, cowpeas, and split peas. Consumption modalities varied; most studies examined mixed pulses, while five isolated individual types. In intervention studies, pulses were incorporated into diets by allotting a fixed pulse serving on top of a regular diet or by substituting red meat with pulses, offering a comparative analysis of dietary effects. The health outcomes evaluated were multifaceted, ranging from lipid profiles to blood pressure, cardiovascular disease risk and mortality, type 2 diabetes and glycemic control, metabolic syndrome indicators, inflammatory markers, oxidative stress biomarkers, and hormonal profiles. The most frequently assessed study outcomes included changes in low-density lipoprotein cholesterol, high-density lipoprotein cholesterol, systolic blood pressure, diastolic blood pressure, fasting blood sugar, hemoglobin A1c, waist circumference, and C-reactive protein or high-sensitivity C-reactive protein. This review should serve as a call to action for the scientific community to build upon the existing evidence, enriching our understanding of the nutritional and health-promoting attributes of pulses.

First report of Colletotrichum incanum causing leaf spots on common bean in Europe (Slovenia).

A Phaseolus vulgaris L. leaf showing necrotic spots was collected in an experimental bean field in central Slovenia in August 2021. The field contained diverse common bean lines sourced from genebank collections, with each line represented by 10 plants. While symptomatic leaves were seen across various lines, the reported species derived exclusively from a Huasca Huallaga Colorado plant (single-seed descent, USDA accession PI153714, doi: 10.18730/H7P9N), a Peruvian landrace. After incubating the leaf for 2 d at ambient temperature in a moist chamber, setose acervuli developed producing curved, distally tapering and proximately truncated conidia. Single-spore cultures developed equally-shaped conidia measuring 14.5-21.5 (avg. 18.5) × 3-4 (avg. 3.5) μm (n=60) on corn meal agar when mounted in lactic acid. Obtained morphological characters and sequences of the partial actin (GenBank accession, OR208162), beta-tubulin (OR208164), and histone 3 (OR208165) gene identified the isolate as Colletotrichum incanum H.-C. Yang, J.S. Haudenshield & G.L. Hartman. Sequences were identical to those from CBS 133485 (= NRRL 62592, IL6A), ex-type strain of C. incanum (KC110823, KC110814, and KC110796). Partial sequences of the chitin synthase (CHS) gene (OR208163), not available for the ex-type strain, was identical to sequences of other C. incanum strains reported from China (KP145539, ON189040, and OQ613679-OQ613686) or differed in two nucleotide positions (OL471268 and OL471269). The strain from Slovenia was deposited in the CBS biobanks of the Westerdijk Fungal Biodiversity Institute (Utrecht, The Netherlands) as CBS 150848. Pathogenicity of the strain was tested by spraying ca. 3×105 conidia as a watery spore suspension onto each leaf of 6 greenhouse-grown and 3 wk-old common bean plantlets (cv. KIS Amand). Nonsterile commercial substrate (Potgrond H, AGRO-FertiCrop) was used and natural light conditions at ambient temperatures (18-23°C) applied. Sterile water was sprayed on 6, equally grown negative control plants. Treated plants showed small brownish spots after 3 wks similar to those described by Yang et al. (2014) on soybean. Setose acervuli formed within 5 days after detached leaves were incubated in moist chambers. No acervuli formed on negative control plants. Conidia re-isolated from these acervuli and obtained cultures were morphologically identical to originally obtained conidia and cultures and those used for performing the pathogenicity test. Anthracnose is an important disease of common bean attributed to various races of C. lindemuthianum (Sacc. & Magnus) Briosi & Cavara (Nunes et al. 2021). Reporting an additional agent potentially able to cause diseases in common bean and so far not known to occur in Europe is of high relevance as the various genetic bean lines used in Europe may show alternative susceptibility levels to it. However, symptoms caused by C. incanum seem to be less severe as those caused by C. lindemuthianum and the species belongs to the C. spaethianum species complex, whose members have so far not been considered as pathogens of economic importance (Talhinhas & Baroncelli 2021). Yang et al. (2014) based C. incanum on isolates from soybean petioles (USA) and associated it with common bean by re-identifying strain ATCC 64682 obtained by Tu (1990) in Canada. Database queries revealed that it was encountered also on sugar beet (USA; Hanson et al. 2023) and on various crop hosts in China (e.g., chili; Diao et al. 2017), but not in Europe. The work was funded by the Ministry of Agriculture, Forestry and Food and conducted as part of research programs P4-0072 and P4-0431, financed by the Slovenian Research and Innovation Agency ARIS, and the Horizon 2020 project INCREASE funded by the European Union.