Coexistence Of Multiple Species Research Articles

Microtopography and vegetation generate uneven predation pressure on forest insects

Predation plays an important role in the coexistence of multiple species within forest ecosystems. It is spatially heterogeneous and influenced by the surrounding environment at different spatial scales. Studies focusing on multiple environmental factors in systems with high spatial complexity are lacking, but elucidating the effects of local environmental factors within a forest could assist in understanding the effects of local differences in predation pressures on multispecies coexistence. Here, we examined the effects of microtopography and vegetation on predation pressure using the model caterpillar method. We hypothesized that differences in microtopography and vegetation types would result in different predation pressures on invertebrates within a forest. Insect attacks were dominant throughout the study period. The attack rates on the model caterpillars were also lower on hill tops and evergreen deciduous trees. Predation pressure within the forest was heterogeneous and independently influenced by topography and vegetation type. Our results suggest that environmental heterogeneity within forests may lead to highly variable predation pressures and affect multispecies coexistence. This study suggests that microtopography and vegetation types within forests should be considered for biological control.

Community ionomics reveals a diversity of mineral nutrition in a species‐rich shrubland on infertile soil

AbstractQuestionsHigh species richness is observed in certain shrublands on infertile substrates. Mineral nutrients are likely to be the primary limiting resources in these ecosystems, and below‐ground plant interactions may be crucial to understanding their diversity. Using ionomics, we investigated whether there were nutritional variations between plant species that coexist in a shrubland located in an edaphically extreme environment.LocationNew Caledonia.MethodsWe set up a 20 m × 20 m plot in a diverse shrubland (“maquis”) on ultramafic (infertile) substrate, in which we sampled all 475 plants taller than 1 m and characterized their ionome (22 elements).ResultsIn our study, 37 species were identified in the plot, representing all major forms of mycorrhizal symbioses, as well as nitrogen‐fixing plants, cluster rooted and parasitic plants. Notably, both nickel hyperaccumulating and manganese hyperaccumulating species were present. Hypervolume approaches were used to assess ionome overlap among the nine most abundant species, with the results revealing limited overlap. Moreover, it was observed that the rarest species in the plot also had the most functionally distinct features.ConclusionsDifferent nutritional strategies were present in the plot, as demonstrated by the variety of root symbioses and leaf ionomes. Our findings indicate coexistence of multiple species within this infertile shrubland may be achieved by species partitioning into different highly specialized biogeochemical niches.

Periodic environmental effect: stochastic resonance in evolutionary games of rock-paper-scissors

A balance in nature is maintained by the coexistence of multiple species through interspecific competition. The evolutionary dynamics of cyclic interactions contain interactions that represent different biological behaviors. Biological behavior is influenced by the external environment, which may affect the stability of ecosystems. We investigated the evolutionary dynamics of interspecific competition after a periodic change in the external environment affects species. We consider that when the periodic external environments affect mortality, interspecific cyclical competition may be more pronounced, and thus increase the probability of extinction of species. By performing Monte Carlo simulations, we observed that the evolutionary dynamics of interspecific cyclic competition have different responsivity when subjected to external periodic changes at different frequencies, and stochastic resonance phenomena occurred. We show that the influence of the periodic external environment and its frequency is one of the factors that determine whether ecosystems coexist stably.

Competition model explains trends of long-term fertilization in plant communities.

Over 40 years ago, Kempton (Biometrics, 35, 1979, 307) reported significant modification to plant community structure following a long-term fertilization experiment. Many researchers have investigated this phenomenon in the years since. Collectively, these studies have shown consistent shifts in rank abundance relationships among species in communities following fertilization. The previous studies indicated that fertilization affects community structure through several critical processes, including trait-based functional response, reordering of species in rank abundance diagram (RAD), and niche dimensionality, although some questions have remained. How does the species reordering driven by the plant responses cause characteristic trends in temporal changes of RAD? Why are those trends ubiquitous in various systems? To answer those questions, we theoretically investigated the effects of fertilization on community structure based on a colonization model (or Levins model) with competition-fecundity trade-offs, which can result in the coexistence of multiple species under competition. The model represents characteristic RAD, which can be an adequate tool to study community composition. Our theoretical model comprehensively represents observed trends in rank abundance relationships following long-term fertilization and suggests that competitive interactions among species are a critical factor in structuring species diversity in plant communities.

Effects of Tree Cutting to a Simulated Two-dimensional Lattice Lotka-Volterra Model of a Terrestrial Plant Community with Microhabitat Locality

As early as the Paleolithic age, when hunters made their weapons using derivative products from trees, wood is an indispensable resource for humanity. Even the Amazon forest cover has been decreasing at a very alarming rate as 7,989 km2 was cleared by logging from July 2015 to August 2016. Despite human interference, most terrestrial plant communities still display relatively high species diversity. Natural communities with only a single species are rare or almost non-existent. A fundamental problem in ecology is why species diversity is possible. It has been previously shown through simulations that spatial heterogeneity or microhabitat locality allows the coexistence of multiple species. However, a phenomenon not yet explored is the effect of human activities such as cutting on spatial heterogeneity. Thus, we extended this microhabitat locality model to include the effects of plant cutting in terrestrial plant ecosystems. This study attempts to observe the effects of human interference (plant cutting) in terrestrial plant ecosystems through simulations. A two-dimensional lattice Lotka-Volterra model was used to study the dynamics of a twenty-species system of a terrestrial plant community with microhabitat locality in the presence of plant cutting – clearcutting and selective cutting. In the model, each species is assigned a unique basal fecundity which defines their strength in the community. The results of the simulations exhibit a higher species diversity when the type of cutting is selective. Moreover, the frequency of cutting and the size of the cleared sites also affect the diversity of a plant community. This study also shows that plant communities with microhabitat locality are resilient even in the presence of human interference

Simulation of a Marine Ecosystem Using Swarm Intelligence

The coexistence of multiple species and their interactions have been a topic of interest for hundreds of years. Humans have been taking advantage of species to maximize surplus or control our environment. Nowadays with the growing complexity of our effect on the Earth, it has become more difficult than ever to understand and plan how we are to use our environment. In this paper we attempt to simulate a marine ecosystem and investigate the factors Based on the boids algorithm and the population growth equation that are important for a sustainable system. This simulation will help us understand how marine populations grow and reach an equilibrium, how sudden spurts in one species affect the others and how even in the most devastating scenarios nature exhibits its incredible ability to replenish itself. We observed some interesting emergent behaviors and how the two species interacted with each other. Then with the use of such simulations, we plotted a population graph by collecting data of the number of sharks and fishes for each frame, and an equilibrium was created. As long as the predator relies on the prey, this equilibrium may have its ups and downs but will always stay in a stable range. This however becomes a different story when humans interfere with the food chain.

How is light interception efficiency related to shoot structure in tall canopy species?

Coexistence of multiple species is a fundamental aspect of plant and forest ecology. Although spatial arrangement of leaves within crowns is an important determinant of light interception and productivity, shoot structure varies considerably among coexisting canopy species. We investigated the relative importance of structural traits in determining the light availability of leaves (I) and light interception efficiency at the current-year shoot level (LIECS; the total light interception of leaves divided by shoot biomass) at the top of crowns of 11 canopy species in a cool-temperate forest in Japan. In accordance with Corner's rules, the total mass, stem mass, total mass of leaf laminae, individual leaf area, and stem cross-sectional area of current-year shoot were positively correlated with each other, and branching intensity (the number of current-year shoots per branch unit of 1-m length) was inversely correlated with these traits across species. In contrast, I was correlated not with these traits, but with leaf elevation angle (a L). Moreover, variation in LIECS across species was caused by variation in I (thus in a L). Thus, a L is a key parameter for the leaf light interception of canopy shoots in this cool-temperate forest. Differences in a L across species might be related to different physiological strategies that developed in the high light and water-limited environment of forest canopies. Small variation in the length of current-year shoots among species implies that variations in I and LIECS would be important for the coexistence of these canopy species.

Insights into resource consumption, cross-feeding, system collapse, stability and biodiversity from an artificial ecosystem.

Community ecosystems at very different levels of biological organization often have similar properties. Coexistence of multiple species, cross-feeding, biodiversity and fluctuating population dynamics are just a few of the properties that arise in a range of ecological settings. Here we develop a bottom-up model of consumer-resource interactions, in the form of an artificial ecosystem 'number soup', which reflects basic properties of many bacterial and other community ecologies. We demonstrate four key properties of the number soup model: (i) communities self-organize so that all available resources are fully consumed; (ii) reciprocal cross-feeding is a common evolutionary outcome, which evolves in a number of stages, and many transitional species are involved; (iii) the evolved ecosystems are often 'robust yet fragile', with keystone species required to prevent the whole system from collapsing; (iv) non-equilibrium dynamics and chaotic patterns are general properties, readily generating rich biodiversity. These properties have been observed in empirical ecosystems, ranging from bacteria to rainforests. Establishing similar properties in an evolutionary model as simple as the number soup suggests that these four properties are ubiquitous features of all community ecosystems, and raises questions about how we interpret ecosystem structure in the context of natural selection.

厦门市售甲鱼蛋携带病原菌情况初步调查

目的：了解厦门市售甲鱼蛋携带病原菌情况。方法：按照病原菌的检测标准进行分离培养，获得纯培养物后，用基质辅助激光解析电离飞行时间质谱(MALDI-TOF-MS)结合相应的诊断血清及PCR方法进行鉴定。结果：自7批厦门市售甲鱼蛋中分离到了16个属26种共76株细菌，甲鱼蛋带菌率为100%，多重带菌情况严重。结论：该次甲鱼蛋的检验结果表明，甲鱼蛋所携带病原菌种类广，大部分为多重带菌，部分携带致病菌或条件致病菌。因此必须做好甲鱼蛋的检疫工作，以确保人们身体健康和养殖业的健康持续发展。 Objective: To explore the situation of pathogens of Xiamenlocal terrapin eggs. Methods: The pathogens were isolated with standard methods. The pure cultures isolated from terrapin eggs were further specified by MALDI-TOF-MS, serological test and PCR methods. Results: 100% of 7 batches of Xiamen local terrapin eggs were contaminated with pathogenic bacteria according to MALDI- TOF-MS. 76 strains of isolated pathogenic bacteria fell into 16 genera and 26 species. All of the terrapin eggs carried five or more pathogenic bacteria. Conclusion: The results suggest that high- contamination rate, broad genera, coexistence of multiple species and isolation of pathogenic bacterium are very common phenomena. It’s very necessary to enforce surveillance of pathogenic bacteria in terrapin eggs.

Unsustainable Land-Based Source Pollution in a Climate of Change: A Roadblock to the Conservation and Recovery of Elkhorn Coral <i>Acropora palmata</i> (Lamarck 1816)

Chronic eutrophication and turbidity are critical detrimental factors impacting coral reef ecosystems, adversely affecting their ecological functions, services, benefits, and resilience across multiple spatial scales and over prolonged periods of time. Inadequate land use practices and lack of appropriate sewage treatment can adversely contribute to increase land-based source pollution (LBSP) impacts in coastal waters and to magnify impacts by sea surface warming trends associated to climate change. Fringing coral reefs off Vega Baja, Puerto Rico, support extensive remnant patches of Elkhorn coral Acropora palmata (Lamarck 1816), which was listed in 2006 as a threatened species under the US Endangered Species Act. Chronic impacts by LBSP have significantly affected local downstream fringing reefs. We characterized the spatial extent of a water quality stress gradient across 12 reefs along the Vega Baja coast through monthly measurements of multiple physico-chemical parameters. Most parameters, particularly PO4, , chlorophyll-a, and the concentration of optical brighteners (OABs), showed a statistically significant increase (PERMANOVA, p 4, , and chlorophyll-a, exceeded recommended concentrations for coral reef ecosystems by factors of 7 - 50 times, 600 - 1240 times, and 17 - 83 times, respectively, depending on the source of the effluents and the distance from sewage pollution sources. Also, water turbidity exceeded 4 - 10 times the recommended value for pristine coral reefs. Coral reefs showed significant decline in close proximity to the polluted zone, showing a significantly different benthic community structure (PERMANOVA, p i.e., macroalgae, algal turf) and bare substrate. Percent coral cover and abundance of A. palmata, showed a significant increase with distance. Coral species richness, species diversity index, and the variance in taxonomic distinctness were very low on reef patches adjacent to the polluted zone, increased at a moderate distance with increasing coral cover and co-existence of multiple species, and declined far from the pollution source due to dominance exerted by A. palmata. This study suggests that chronic LBSP resulted in a major decline of one of the largest and most dense remnant stands of A. palmata across the northeastern Caribbean and that nutrient and chlorophyll-a concentrations were unsustainable for coral reefs. This situation requires immediate solution to prevent further damage to these unprecedented resources. It further suggests that chronic LBSP may synergistically magnify sea-surface warming impacts driving corals to an increased state of risk in face of forecasted climate change impacts. Actions to mitigate and adapt to climate change impacts on coral reefs must require a priori controls of LBSP to be effective.

Coexistence of Competitive Species on Lattice under Periodical Disturbance: Crucial Effects of Local Interaction

Disturbances to an ecosystem usually decrease the population size of a species, but promote the coexistence of multiple species. Here we present lattice ecosystems composed of two competing species, where disturbance is applied periodically. Simulations are carried out by determining whether the interaction is global or local. The global interaction corresponds to Huston's model. We prove that the coexistence is impossible for the global interaction but possible for local interaction. We thus illustrate that the local interaction promotes species coexistence.

Anaerobic benzene degradation under denitrifying conditions: Peptococcaceae as dominant benzene degraders and evidence for a syntrophic process

An anaerobic microbial community was enriched in a chemostat that was operated for more than 8 years with benzene and nitrate as electron acceptor. The coexistence of multiple species in the chemostat and the presence of a biofilm, led to the hypothesis that benzene-degrading species coexist in a syntrophic interaction, and that benzene can be degraded in syntrophy by consortia with various electron acceptors in the same culture. The benzene-degrading microorganisms were identified by DNA-stable isotope probing with [U-(13) C]-labelled benzene, and the effect of different electron donors and acceptors on benzene degradation was investigated. The degradation rate constant of benzene with nitrate (0.7 day(-1) ) was higher than reported previously. In the absence of nitrate, the microbial community was able to use sulfate, chlorate or ferric iron as electron acceptor. Bacteria belonging to the Peptococcaceae were identified as dominant benzene consumers, but also those related to Rhodocyclaceae and Burkholderiaceae were found to be associated with the anaerobic benzene degradation process. The benzene degradation activity in the chemostat was associated with microbial growth in biofilms. This, together with the inhibiting effect of hydrogen and the ability to degrade benzene with different electron acceptors, suggests that benzene was degraded via a syntrophic process.

Different dispersal abilities allow reef fish to coexist.

The coexistence of multiple species on a smaller number of limiting resources is an enduring ecological paradox. The mechanisms that maintain such biodiversity are of great interest to ecology and of central importance to conservation. We describe and prove a unique and robust mechanism for coexistence: Species that differ only in their dispersal abilities can coexist, if habitat patches are distributed at irregular distances. This mechanism is straightforward and ecologically intuitive, but can nevertheless create complex coexistence patterns that are robust to substantial environmental stochasticity. The Great Barrier Reef (GBR) is noted for its diversity of reef fish species and its complex arrangement of reef habitat. We demonstrate that this mechanism can allow fish species with different pelagic larval durations to stably coexist in the GBR. Further, coexisting species on the GBR often dominate different subregions, defined primarily by cross-shelf position. Interspecific differences in dispersal ability generate similar coexistence patterns when dispersal is influenced by larval behavior and variable oceanographic conditions. Many marine and terrestrial ecosystems are characterized by patchy habitat distributions and contain coexisting species that have different dispersal abilities. This coexistence mechanism is therefore likely to have ecological relevance beyond reef fish.

Zn- and Cu-thioneins: a functional classification for metallothioneins?

This report intends to provide the reader with a deeper insight in the chemical, and extensively biological, characteristics of the metallothionein (MT) system. We have devoted nearly 20years to the study of MTs and this has allowed us to form what we believe is a more complete picture of this peculiar family of metalloproteins. At the beginning of the 1990s, the landscape of this field was quite different from the overall picture we have now. Many researchers have contributed to the readjustment of this part of scientific knowledge. In our case, we implemented a unified method for obtaining MTs, for characterizing their metal-binding features, and for applying a unified research rationale. All this has helped to enlarge the initial picture that was mainly dominated by mammalian MT1/MT2 and yeast Cup1, by introducing approximately 20 new MTs. It has also allowed some characteristics to be clarified and examined in more detail, such as the cooperativity or the coexistence of multiple species in the metal-substitution reactions, the availability of Ag(I) or Cd(II) for use as respective probes for the Cu(I) and Zn(II) binding sites, the participation of chloride or sulfide ligands in the metal coordination spheres, and the feasibility of using in vitro data as representative of in vivo scenarios. Overall, the results yield enough data to consider new criteria for a proposal of classification of MTs based on MT metal-binding features, which complements the previous classifications, and that can shed light on the still controversial physiological functions of this peculiar superfamily of metalloproteins.

Inhibiting effects of Streptococcus salivarius on competence‐stimulating peptide‐dependent biofilm formation by Streptococcus mutans

The effects of Streptococcus salivarius on the competence-stimulating peptide (CSP)-dependent biofilm formation by Streptococcus mutans were investigated. Biofilms were grown on 96-well microtiter plates coated with salivary components in tryptic soy broth without dextrose supplemented with 0.25% sucrose. Biofilm formations were stained using safranin and quantification of stained biofilms was performed by measuring absorbance at 492 nm. S. mutans formed substantial biofilms, whereas biofilms of S. salivarius were formed poorly in the medium conditions used. Furthermore, in combination cultures, S. salivarius strongly inhibited biofilm formation when cultured with S. mutans. This inhibition occurred in the early phase of biofilm formation and was dependent on inactivation of the CSP of S. mutans, which is associated with competence, biofilm formation, and antimicrobial activity of the bacterium, and is induced by expression of the comC gene. Comparisons between the S. mutans clinical strains FSC-3 and FSC-3DeltaglrA in separate dual-species cultures with S. salivarius indicated that the presence of the bacitracin transport ATP-binding protein gene glrA caused susceptibility to inhibition of S. mutans biofilm formation by S. salivarius, and was also associated with the regulation of CSP production by com gene-dependent quorum sensing systems. It is considered that regulation of CSP by glrA in S. mutans and CSP inactivation by S. salivarius are important functions for cell-to-cell communication between biofilm bacteria and oral streptococci such as S. salivarius. Our results provide useful information for understanding the ecosystem of oral streptococcal biofilms, as well as the competition between and coexistence of multiple species in the oral cavity.

Power Law for Extinction Process in Multiple Contact Process

We deal with a multiple contact process, that is a modification of the contact process. This system contains N kinds of species ( N = 10) on a finite-sized square lattice. Simulations are carried out using two different methods: local and global interactions. It is found that the waiting time to the extinction of the first species follows a power law. Moreover, we find that local interaction promotes the coexistence of multiple species.

The short-term influence of herbivory near patch reefs varies between seagrass species

The coexistence of multiple species within a trophic level can be regulated by consumer preferences and nutrient supply, but the influence of these factors on the co-occurrence of seagrass species is not well understood. We examined the biomass and density responses of two seagrass species in the Florida Keys Reef Tract to grazing pressure near patch reefs, and evaluated how nutrient enrichment impacted herbivory dynamics. We transplanted Halodule wrightii (shoalgrass) sprigs into caged and uncaged plots in a Thalassia testudinum (turtlegrass) bed near a patch reef. Nutrients (N and P) were added to half of the experimental plots. We recorded changes in seagrass shoot density, and after three months, we measured above- and belowground biomass and tissue nutrient content of both species. Herbivory immediately and strongly impacted H. wrightii. Within six days of transplantation, herbivory reduced the density of uncaged H. wrightii by over 80%, resulting in a decrease in above- and belowground biomass of nearly an order of magnitude. T. testudinum shoot density and belowground biomass were not affected by herbivory, but aboveground biomass and leaf surface area were higher within cages, suggesting that although herbivory influenced both seagrass species, T. testudinum was more resistant to herbivory pressure than H. wrightii. Nutrient addition did not alter herbivory rates or the biomass of either species over the short-term duration of this study. In both species, nutrient addition had little effect on the tissue nutrient content of seagrass leaves, and N:P was near the 30:1 threshold that suggested a balance between N and P. The different impacts of grazing on these two seagrass species suggest that herbivory may be an important regulator of the distribution of multiple seagrass species near herbivore refuges like patch reefs in the Caribbean.

Mechanisms, effects, and scales of dispersal in freshwater zooplankton

The distribution of organisms can be regulated by local environmental factors and regional processes such as dispersal. Here, we review recent work on the role of dispersal for generating population and community structure in freshwater zooplankton. We examine evidence for different mechanisms of dispersal among lakes, for the effects of dispersal limitations on populations and communities, and for the effects of spatial scale on dispersal rates. Zooplankton move via human or animal vectors, flowing surface waters, and wind; the relative importance of the different modes of transport is poorly understood. Several lines of evidence suggest that dispersal among lakes separated over short spatial scales (<10 km) is sufficiently rapid that local interactions should limit species diversity and composition more than the supply of colonists. However, dispersal limitation over broad scales (tens to thousands of kilometers) might constrain geographic ranges and influence community structure. The current explosion in the incidence of exotic species indicates that such global‐ or continental‐scale dispersal was limiting in the past. The spread of exotic species also provides opportunities to study the scale dependence of zooplankton dispersal. We show how patterns of range expansion can be used to estimate the change in invasion likelihood with distance to a source population. Such dispersal functions provide a crucial link between small‐scale experimental studies and broad‐scale geographic patterns.

Methods for magnetotransport characterization of IR detector materials

Advanced techniques for the magnetotransport characterization of semiconductor IR detector materials are reviewed. Both conventional mixed-conduction and 'mobility spectrum' analyses of the resistivity tensor as a function of magnetic field and temperature are discussed, as well as a hybrid approach which exploits the advantages of both methods. Assuming that the data are sufficiently sensitive, one obtains concentrations and mobilities for each electron and hole species present in a given sample. This is particularly valuable for narrow-gap infrared detector materials such as Hg1-xCdxTe, since the coexistence of multiple species tends to be the rule rather than the exception, and 'anomalous' Hall data are easily misinterpreted if inferences are drawn from measurements at only a single magnetic field. In addition to bulk electron and hole densities and mobilities, one can determine inversion and accumulation layer properties from the anomalous Hall effect, acceptor binding energies and compensation ratios from the low-temperature freeze-out of free holes, and energy gaps from the temperature dependence of the intrinsic carrier concentration. Shubnikov-de Haas and quantum Hall measurements provide additional information about the spatial distribution of the carriers. Electron and hole mobilities in Hg1-xCdxTe detector materials will be briefly reviewed, and theoretical and experimental results compared.