IntroductionHigh annual tomato yields are achieved using high-tech greenhouse production systems. Large greenhouses typically rely only on one central weather station per compartment to steer their internal climate, ignoring possible microclimate conditions within the greenhouse itself.MethodsIn this study, we analysed spatial variation in temperature and vapour pressure deficit in a commercial tomato greenhouse setting for three consecutive years. Multiple sensors were placed within the crop canopy, which revealed microclimate gradients.Results and discussionDifferent microclimates were present throughout the year, with seasonal (spring – summer – autumn) and diurnal (day – night) variations in temperature (up to 3 °C, daily average) and vapour pressure deficit (up to 0.6 kPa, daily average). The microclimate effects influenced in part the variation in plant and fruit growth rate and fruit yield – maximum recorded difference between two locations with different microclimates was 0.4 cm d-1 for stem growth rate, 0.6 g d-1 for fruit growth rate, 80 g for truss mass at harvest. The local microclimate effect on plant growth was always larger than the bulk climate variation measured by a central sensor, as commonly done in commercial greenhouses. Quality attributes of harvested tomato fruit did not show a significant difference between different microclimate conditions. In conclusion, we showed that even small, naturally occurring, differences in local environment conditions within a greenhouse may influence the rate of plant and fruit growth. These findings could encourage the sector to deploy larger sensor networks for optimal greenhouse climate control. A sensor grid covering the whole area of the greenhouse is a necessity for climate control strategies to mitigate suboptimal conditions.