With the advancement of educational reform, higher education and teaching have also ushered in new opportunities for reform. In this context, ways to improve the teaching effectiveness of the Deep Learning course and cultivate students’ professional literacy and comprehensive abilities have become one of the teaching difficulties that troubles university teachers. The application of the flipped classroom teaching mode can effectively cultivate students’ core competencies and comprehensive abilities, which is crucial for their future learning and development. Therefore, it is necessary for universities to use the flipped classroom teaching model in the teaching of Deep Learning course in order to stimulate students’ interest in learning, mobilize their subjective initiative, and improve the effectiveness of classroom teaching. In this regard, this article provides a brief analysis of the teaching reform of the Deep Learning course in universities based on the flipped classroom teaching model, hoping to provide valuable reference and guidance for readers.