Clair River Research Articles

Evaluation of repeat bathymetric surveys on water surface elevations on the Saint Clair River

The Great Lakes contain 20 percent of the world’s fresh surface water, a drinking source for 30- million people. The system is vital to manufacturing, largely due to efficient transportation of commodities and an abundance of natural resources. Understanding the water balance and predicting future water levels is important for many industries including commercial navigation, the tourist industry, hydropower and shoreline property owners, just to name a few. These predictions require an understanding of both the hydroclimate drivers across the Great Lakes as well as physical changes in the connecting channels that pass water between each lake. Since the International Upper Great Lakes Study began, the St. Clair River has been the topic of conveyance change investigations. This study tests the sensitivity of water surface elevations to small differences in bathymetric changes. Greater than 80 percent of the surveyed points had less than 0.24 m of change between any combination of survey years. Repeat bathymetric surveys collected in 2007, 2012 and 2021, along with hydrodynamic modeling, find changes in water surface elevations associated with bathymetric change are on the sub-centimeter scale. These changes are put into perspective and compared to known anthropogenic and naturally occurring conveyance changes. While these surveys represent a short duration in the observed water level record of the Great Lakes, they represent an important documentation of the geomorphic state of the St. Clair River. These changes can and should be compared to similar future surveys of the river over longer engineering and geomorphic timescales.

Habitat modelling of native freshwater mussels distinguishes river specific differences in the Detroit and St. Clair rivers of the Laurentian Great Lakes

Native freshwater mussels (Bivalvia: Unionidae) were seemingly pushed to extirpation following the establishment of dreissenid mussels in the St. Clair (SCR)–Detroit River (DR) System and the current state of unionids in the main channels of the SCR remains unknown. To assess remnant unionid populations, the DR and SCR were surveyed in 2019 and 2021, respectively, using a mixture of stratified random, historical, potential refuge, and model-selected (SCR sampling only) sites (n = 56 DR sites and 51 SCR sites). Data collected from the DR (2019) were used to create unionid species distribution models in MaxEnt, which produced the model-selected sites for sampling the SCR. A total of 14 live unionids representing 9 species were found among 7 sites in the SCR; however, the DR model projected to the SCR failed to be predictive for unionid presence in the SCR (0 % success). Additional models were created for the DR and SCR using MaxEnt and classification and regression tree (CART) Analysis to elucidate the characteristic differences between the two rivers. MaxEnt modelling showed the highest contributing variable for the DR model was water velocity (m/s) while the highest contributing variable for the SCR model was river distance to the outlet which could be one explanation for why the DR model did not accurately predict unionid presence in the SCR. Additionally, when DR and SCR data were combined in the CART model, the model failed to predict any live unionid sites from the SCR. Variability in model predictions demonstrate the characteristic differences between the DR and SCR. Therefore, model verification for both rivers specific models took place in 2022 (n = 8 DR sites and 6 SCR sites). The DR unionid species distribution model identified 3 additional sites with live unionids (38 % of predicted sites), but the SCR model did not locate any additional live unionid locations (0 % of predicted sites). This research updated our knowledge on native unionid distributions and habitat use in the DR and SCR which could contribute towards unionid conservation in the future.

Metal tolerance and biosorption capacities of bacterial strains isolated from an urban watershed.

Rapid industrialization and urbanization have led to widespread metal contamination in aquatic ecosystems. This study explores the metal tolerance and biosorption characteristics of four bacterial strains (Serratia sp. L2, Raoultella sp. L30, Klebsiella sp. R3, and Klebsiella sp. R19) isolated from Saint Clair River sediments. These strains effectively removed various metal cations (As3+, Pb2+, Cu2+, Mn2+, Zn2+, Cd2+, Cr6+, and Ni2+) in single and multi-metal solutions. Minimum inhibitory concentration (MIC) assays revealed strain-specific variations in metal tolerance, with L2 and L30 exhibiting higher tolerance. Surprisingly, R3 and R19, despite lower tolerance, demonstrated superior metal removal efficiency, challenging the notion that tolerance dictates removal efficacy. In single-metal solutions, R3 and R19 excelled at extracting various metal ions, while competitive binding in multi-metal solutions hindered removal. However, R3 and R19 retained higher removal efficiencies, possibly due to enhanced flocculation activities facilitating metal-ion contact. Comprehensive Fourier-transform infrared (FTIR) analysis highlighted the strains' metal-binding capabilities, with novel peaks emerging after metal exposure, indicative of extracellular polymeric substance (EPS) production. Scanning electron microscopy (SEM) and energy-dispersive X-ray spectroscopy (EDX) confirmed metal accumulation on bacterial surfaces and within cytoplasmic regions and revealed morphological changes and metal adsorption patterns, emphasizing the strains' ability to adapt to metal stress. Scanning transmission microscopy (STEM) and EDX analysis uncovered metal accumulation within bacterial cells, underscoring the complexity of microbial-metal interactions. This study also confirms that the simultaneous presence of an aqueous solution may cause a mutual inhibition in the adsorption of each metal to the EPS resulting in reduced metal uptake, which emphasizes the need to select specific bacterial strains for a given metal-containing effluent. The differences in metal distribution patterns between Klebsiella sp. R19 and Raoultella sp. L30 suggest species-specific metal accumulation strategies driven by environmental conditions and metal availability. The heavy metal-removing capabilities and the ability to grow over a wide range of metal concentrations of the strains used in this study may offer an advantage to employ these organisms for metal remediation in bioreactors or in situ.

A mass-balance approach for predicting lake phosphorus concentrations as a function of external phosphorus loading: Application to the Lake St. Clair – Lake Erie System (Canada – USA)

Abstract A mass balance model is presented that links the total phosphorus concentration in lakes to the water residence time, Rw (lake volume divided by the annual water inflow) and the total phosphorus residence time, Rp (average standing stock of lake total phosphorous divided by the external annual total phosphorus input). Following a change in the external load, the lake total phosphorus concentration asymptotically approaches a new value that depends on the Rp:Rw ratio, with the rate of approach controlled by Rp. We applied this approach to a recent reanalysis of the water and total phosphorus budgets of the Lake Erie system of the Laurentian Great Lakes for the 2003-2016 period. We generated load–response relationships and response matrices that relate the steady state total phosphorus concentrations to external total phosphorus loads, for the whole Lake Erie system and for the individual basins (Lake St. Clair, western basin, central basin, eastern basin) and connecting channels (St. Clair River, Detroit River). These relationships and matrices provide a simple but robust framework to gauge the potential response of total phosphorus concentrations to total phosphorus load reductions, such as the 40% reduction proposed for Lake Erie under the Canada-United States Great Lakes Water Quality Agreement. The mass balance analysis further highlights the importance of inter-basin total phosphorus transfers. For example, around 70% of the total phosphorus concentration in the eastern basin is contributed by inflow from the central basin. Consequently, total phosphorus load abatements in watersheds upstream of the eastern basin, rather than in the direct watershed itself, will have the greatest impact on the eastern basin's concentration. Overall, our results illustrate how simple mass balance calculations can provide useful guidance to efforts to manage phosphorus enrichment of lakes.

Lake Sturgeon population trends in the St. Clair–Detroit River system, 2001–2019

AbstractObjectiveThe Lake Sturgeon Acipenser fulvescens is listed as threatened or endangered in 15 states or provinces within the species' native range. Accordingly, investments in habitat and population restoration for this species have increased throughout the Great Lakes. To aid in the evaluation of restoration efficacy, robust population parameters are needed to inform management decisions. The St. Clair–Detroit River system (SCDRS) contains one of the largest self‐sustaining Lake Sturgeon populations in the Great Lakes; however, recent estimates of population abundance and growth parameters have not been assessed.MethodsOur study used baited setline and mark–recapture data collected between 2001 and 2019 to estimate whether the number of Lake Sturgeon captured varied annually and/or with water temperature and whether population abundance and the population growth rate (λ) varied among three subpopulations located in the SCDRS.ResultTrends in the number of Lake Sturgeon captured on setlines varied among subpopulations and by life stage. Annual trends in the number of Lake Sturgeon captured remained consistent over time in the upper St. Clair River, decreased for adults and increased for subadults in the lower St. Clair River, and increased in the Detroit River. With subpopulation abundances of 20,184 (95% confidence interval [CI] = 12,533–27,816) in the upper St. Clair River/southern Lake Huron, 6523 (95% CI = 5720–7327) in the lower St. Clair River, and 6416 (95% CI = 4065–8767) in the Detroit River, our study confirms that the SCDRS contains the largest Lake Sturgeon population with unimpeded access to the Great Lakes. The geometric mean λ for all subpopulations indicated stable populations and ranged from 1.00 to 1.16.ConclusionOur study provides an updated assessment of Lake Sturgeon population parameters that serve as a baseline to evaluate habitat restoration efforts and to inform management of the SCDRS recreational Lake Sturgeon fishery.

Biological Investigation of the Endangered Northern Madtom in the North Channel St. Clair River

AbstractAquatic organisms and the habitats they live in are declining globally, yet managers often lack even basic biological information for individual imperiled species. This makes assessment of the current status, management needs, and recovery targets for these species challenging. One such organism is the Northern Madtom Noturus stigmosus, a small, bottom‐dwelling catfish of the family Ictaluridae. Northern Madtom are listed as endangered in the state of Michigan and the province of Ontario, with only a handful of isolated populations known in each region. To address life history uncertainties and to provide fisheries managers with baseline information to inform decision making, the Michigan Department of Natural Resources annually sampled Northern Madtom in the St. Clair River using minnow traps and amassed the largest known data set for this species. We handled 871 individuals from 2010 to 2022, with yearly catch rates ranging from 0.17 to 1.33 individuals/trap. Age estimates derived from otoliths and dorsal spines of 17 individuals showed no clear pattern of bias, indicating that nonlethally collected dorsal spines provide a suitable age estimation method. We developed an age–length key to assign ages to all individuals in our data set, calculated growth parameters, and determined that annual mortality rates across all ages ranged from 46% to 69%. Diet analysis revealed that caddisfly (order Trichoptera) larvae were the dominant prey item and fecundity averaged 178 eggs/female. We compared microsatellite allele frequencies and mitochondrial DNA haplotypes among samples collected in the St. Clair River and the Detroit River. Significant evidence of genetic structure was present, indicating limited gene flow and suggesting that separate management of these two populations may be warranted. Collectively, these data provide context for managers interested in the development of biological reference points and planning for the conservation and management of this species.

Spatiotemporal segregation by migratory phenotype indicates potential for assortative mating in lake sturgeon

Migratory diversity can promote population differentiation if sympatric phenotypes become temporally, spatially, or behaviorally segregated during breeding. In this study, the potential for spatiotemporal segregation was tested among three migratory phenotypes of lake sturgeon (Acipenser fulvescens) that spawn in the St. Clair River of North America's Laurentian Great Lakes but differ in how often they migrate into the river and in which direction they move after spawning. Acoustic telemetry over 9 years monitored use of two major spawning sites by lake sturgeon that moved north to overwinter in Lake Huron or south to overwinter in Lake St. Clair. Lake St. Clair migrants were further distinguished by whether they migrated into the St. Clair River each year (annual migrants) or intermittently (intermittent migrants). Social network analyses indicated lake sturgeon generally co-occurred with individuals of the same migratory phenotype more often than with different migratory phenotypes. A direct test for differences in space use revealed one site was almost exclusively visited by Lake St. Clair migrants whereas the other site was visited by Lake Huron migrants, intermittent Lake St. Clair migrants, and, to a lesser extent, annual Lake St. Clair migrants. Analysis of arrival and departure dates indicated opportunity for co-occurrence at the site visited by all phenotypes but showed Lake Huron migrants arrived approximately 2 weeks before Lake St. Clair migrants. Taken together, our results indicated partial spatiotemporal segregation of migratory phenotypes that may generate assortative mating and promote population differentiation.

Intra-specific variation in responses to habitat restoration: Could artificial reefs increase spatiotemporal segregation between migratory phenotypes of lake sturgeon?

Habitat restoration is an important tool used to conserve biodiversity and restore species, but its effects are notoriously difficult to predict. Although outcomes of restoration projects are usually assessed using indices of species abundance and diversity, phenotypic differences among individuals within species are likely associated with differing responses to restored habitats. Here, we use lake sturgeon (Acipenser fulvescens) as a case study to illustrate how responses to habitat restoration can differ between phenotypes and potentially lead to unanticipated effects on populations. North America’s St. Clair River supports one of the largest remaining populations of lake sturgeon but has lost much spawning habitat due to its role as a major industrial corridor between the Laurentian Great Lakes Erie and Huron. Two artificial reefs were recently built in the lower and middle segments of the river to increase the available sturgeon spawning habitat. Interestingly, lake sturgeon in the St. Clair River express different migratory phenotypes that may be associated with different likelihoods of colonizing artificial reefs. Acoustic telemetry revealed that artificial reefs were more likely to be used by sturgeon that migrated downstream to overwinter in Lake St. Clair than those that migrated upstream to overwinter in Lake Huron. Furthermore, increasing time spent at the artificial reefs by Lake St. Clair migrants was associated with later arrival to and shorter occupancy of the river’s only natural spawning site, the primary location where the two phenotypes have opportunity to interbreed. Additional research is necessary to determine the ultimate impacts of the artificial reefs on lake sturgeon populations; nevertheless, our study showed phenotype-specific opportunity to colonize restored habitat and a mechanism through which this could lead to changes in gene flow. Our results illustrate the importance of considering intra-specific diversity when planning restoration projects and assessing the effects on populations.

Nonlethal detection of PFAS bioaccumulation and biomagnification within fishes in an urban- and wastewater-dominant Great Lakes watershed

Per- and polyfluoroalkyl substances (PFAS) are synthetic endocrine disruptors that are particularly stable and pervasive due to strong carbon-fluorine bonds. They are known to bioaccumulate in protein-rich tissues of fish, and most cannot be eliminated with cooking. Despite studies linking PFAS to adverse health outcomes, there is a lack of international regulations of PFAS as a hazardous material. To investigate PFAS in an aquatic food web and the potential human health implications, we analyzed the concentrations of 40 PFAS from muscle biopsy and serum samples of fish representing different trophic levels along the Lake Huron – Lake Erie Corridor. In Summer (2021), walleye (Sander vitreus; WAE), yellow perch (Perca flavescens; YEP) and round gobies (Neogobius melanostomus; ROG) were collected for analysis from the Detroit River (contaminated site) and St. Clair River (reference site). Eight PFAS congeners were detected in muscle and 15 congeners in serum, leading to the novel detection in Great Lakes fish of 7:3 FTCA in muscle and PFHpS, PFNS, MeFOSAA, and EtFOSAA in serum. PFOS was detected in 100% of muscle and serum pools across all species at concentrations lower than those associated with fish toxicity. Muscle PFOS concentration in DR WAE fell under the 8 meals per month (>13 ng–19 ng) fish consumption advisory according to the State of Michigan. Log bioaccumulation factor was significantly different (p = 0.01) among species in DR, driven by higher log BAF for WAE (3.8 ± 0.1) compared to ROG (3.2± 0.02). Biomagnification factor greater than 1 for all species in both rivers indicates that PFOS is biomagnifying in SCR and DR food webs. Successful detection and quantification of PFAS in the muscle and serum of three fish species demonstrates the potential for using this nonlethal sampling method to monitor PFAS and better understand ecological and human health impacts of PFAS exposure.

The Accidental Reef and Other Ecological Odysseys in the Great Lakes by Lynne Heasley

Reviewed by: The Accidental Reef and Other Ecological Odysseys in the Great Lakes by Lynne Heasley Nicholas Cunigan Lynne Heasley. The Accidental Reef and Other Ecological Odysseys in the Great Lakes. East Lansing, Michigan: Michigan State University Press, 2021. Pp. 264. Black and white illustrations. Index. Notes. Paperback: $27.95. Lynne Heasley beckons the reader of The Accidental Reef to see the Great Lakes through a kaleidoscope. And through her kaleidoscopic vision, the world of the Great Lakes is reflected and refracted through stories of evolution, biology, geology, ichthyology, etymology, walleye taxonomy, scuba divers, and more. This is not simply a case in interdisciplinary research. Heasley is calling out the compartmentalization of higher education, and her work illustrates what can be achieved when one practices what they preach. (30–31) [End Page 118] Heasley blends art, science, and history to illuminate what she refers to as the “accidental reef.” This reef—located in the St. Clair River, which flows from Lake Huron into Lake St. Clair and forms part of the international border between Michigan and Ottawa, Canada—formed as an “accident of history and ecology” when steamships dumped their coal waste into the river and created a spawning reef for lake sturgeon. (x) In vivid, poetic, and often humorous prose, Heasley tells the stories of the lives lived on and in the St. Clair River. She weaves together a menagerie of stories ranging from industrial pollution, the deep history of zebra mussels, the sex lives of sturgeon, and the lost lures of fishers recovered by an intrepid scuba diver seeking to restore broken relationships both in and out of the water. All this reimagining, though, is not without purpose. These seemingly random anecdotes are deeply intertwined. Heasley is arguing through these stories that the “care and protection of the Great Lakes demands different ways of seeing and knowing.” (ix) Heasley joins a growing cadre of historians and reporters (such as Nancy Langston in Sustaining Lake Superior: An Extraordinary Lake in a Changing World and Dan Egan in The Death and Life of the Great Lakes) who are plying the depths, shallows, and shores of the Great Lakes to reveal the troubled past of these waters in hopes of ensuring the lakes a better future. Heasley is making important points about the region’s past, including the exploitation of both the Great Lakes’ natural resources as well as cultural knowledge that has been appropriated through extractive biocolonialism. Her most poignant contribution, though, might be in her account of the Great Lakes’ “paradox of abundance;” the Great Lakes are filled with North America’s largest supply of freshwater and are home to the world’s largest lake. This abundance, Heasley cautions, should not be taken for granted. The histories of bison, passenger pigeons, and monarch butterflies show that abundance often give humans a false sense of inexhaustibility. And as climate change is projected to dry out the American West and extend in time and space the current megadrought, the seemingly inexhaustible Great Lakes might be tapped to quench America’s thirst. This warning makes Heasley’s contribution more than a regional history of a forty-mile-long river and the industries, businesses, tribes, and individuals who rely upon it. Instead, Heasley’s work is a lighthouse—warning all those who rely on the steady supply of freshwater that we are too close to shore and without immediate action, we risk crashing into it. [End Page 119] Nicholas Cunigan Calvin University Copyright © 2022 Historical Society of Michigan

Wind-Driven Sediment Resuspension in the World's Fourth Largest Lake Contributes Substantial Phosphorus Load to the 11th Largest Lake.

Capturing precipitation-based episodes is a longstanding issue for estimating tributary loads; however, wind-driven resuspension in Lake Huron creates similar uncertainties in its estimated load to Lake Erie. Recent suggestions that the phosphorus load from Lake Huron is underestimated because sampling frequencies miss contributions from resuspension events are speculative because they did not include direct load measurements, address all resuspension regions, or assess the potential bioavailability of the load. We address these shortcomings by evaluating Lake Huron's nearshore regions, characterizing the biological availability of the load, and providing direct comparisons of load estimates with and without the resuspended load. We show that total phosphorus concentrations in Lake Huron and the St. Clair River are higher during resuspension events and that bioavailability of that material is comparable to that reported elsewhere. New load estimates, based on continuous turbidity measurements converted to phosphorus through P-turbidity relationships, were almost 90% higher than traditional load estimates, providing empirical evidence for the significantly underestimated previous load. This confirmation is important because if the Lake Huron load is not decreased, reductions from other sources would be needed to meet the overall reduction targets set by the binational Great Lakes Water Quality Agreement.

Local diversity in phenological responses of migratory lake sturgeon to warm winters

Rich intraspecific diversity in traits that shape responses to environmental conditions implies that effects of climate change will differ within species or even populations. Nevertheless, few studies investigate how different groups within species respond to climatic fluctuations, and most risk assessments rely upon species‐wide generalizations. We studied effects of among‐year variation in air temperature on the spring migratory phenology of a metapopulation of lake sturgeon Acipenser fulvescens within waters connecting Lake Huron and Lake Erie of the Laurentian Great Lakes. Sturgeon here express multiple migratory phenotypes that all spawn in either the St. Clair River or Detroit River but differ in their use after spawning of more than 86 000 km2 of accessible lake and river habitat. Acoustic tracking over nine years (2012–2020) revealed mixed phenological responses to late‐winter air temperatures, with three migratory groups arriving at rivers earlier during warm years and one whose arrival was consistent across years regardless of temperature. Notably, two groups that spawn in the same river but overwinter in different lakes entered the river with greater synchrony during warm years because one advanced its phenology while the other did not. The results indicated warm weather could alter the dynamics of the metapopulation and broader community, and exemplify the complexity hidden beneath broadscale generalizations of species' response to climate change.

Identifying and characterizing juvenile lake sturgeon ( Acipenser fulvescens , Rafinesque, 1817) occupancy hot spots within the St. Clair‐Detroit River System

Over the past two decades, extensive monitoring has been conducted in the St. Clair – Detroit River System to describe spatial and temporal patterns of lake sturgeon (Acipenser fulvescens). To characterize spatial patterns in juvenile lake sturgeon (<1000 mm TL) based on survey collections, ‘hot spots’ were identified through optimized hot spot analysis (HSA). This HSA was then interpolated by inverse distance weighted analysis to determine extent of identified ‘hot spots’ and ‘cold spots’. Additionally, habitat variables (i.e., water depth, water velocity, and dominant substrate type) were investigated using a single season occupancy model to determine their influence on juvenile lake sturgeon occupancy probability. In total, 1203 juvenile lake sturgeon were captured across 4197 surveys. Three unique ‘hot spots’ were identified; western Lake Erie, Fighting Island in the Detroit River, and the North Channel in the St. Clair River. Interpolated ‘hot spots’ encompassed 73.1 km² in western Lake Erie, 4.7 km² near Fighting Island, and 6.6 km² in the North Channel. Detection probabilities within ‘hot spots’ ranged from 8.8%–43.4%. No habitat variables significantly predicted juvenile lake sturgeon occupancy. Juvenile lake sturgeon were captured in western Lake Erie where the water depth was >5.1 m and odds of occupancy increased with increased water velocity. Juvenile lake sturgeon in the Detroit and St. Clair River ‘hot spots’ were captured at sites with mean benthic water velocities ranging from 0.20–0.60 m/s and where water depth was >7.3 m. Irrespective of waterbody, 69% of all juveniles were detected over dominant sand and gravel substrates. These results provide valuable insight about juvenile habitat use that can help managers formulate effective conservation and restoration strategies supporting the continued recovery of Great Lakes lake sturgeon.

Genetic species identification of coregonines from juvenile assessment and commercial fisheries in Lake Erie, Detroit River, and St. Clair River

Genetic species identification of coregonines from juvenile assessment and commercial fisheries in Lake Erie, Detroit River, and St. Clair River

Occurrence, characterization, source, and risk assessment of petroleum-related hydrocarbons in sediments along St. Clair River, Ontario, Canada

Total petroleum hydrocarbons (TPH), n-alkanes, petroleum biomarkers, and polycyclic aromatic hydrocarbons (PAHs) were analyzed in the sediments collected from the shorelines and bottom of St. Clair River, Ontario, Canada. Most of the sampling sites had low TPH (< 20 μg/g). River bottom sediment usually had higher level of TPHs, total alkanes, total biomarkers, and total PAHs than most of the shoreline ones. Mixed biogenic and petrogenic n-alkanes were present in all the sites. Most sites had trace amounts of petroleum biomarkers. Mixed pyrogenic and petrogenic inputs with the predominant petroleum, have contributed to the detected PAHs at all sampling sites. PAHs detected would not show potential toxicity to benthic organisms in all shoreline sampling sites; however, some light molecular weight PAHs (e.g., phenanthrene, 2-methyl naphthalene, and acenaphthylene) are anticipated to have possible adverse impacts to sediment-dwelling organisms in part of the river bottom sediment.

Incidence of lamprey marks on Lake Sturgeon ( Acipenser fulvescens Rafinesque, 1817) in the St. Clair – Detroit River System: Implications for Sea Lamprey ( Petromyzon marinus Linnaeus, 1758) effects

Laurentian Great Lakes Lake Sturgeon (Acipenser fulvescens) are hosts to lamprey species, including native Silver Lamprey (Ichthyomyzon unicuspis) and invasive Sea Lamprey (Petromyzon marinus). Silver Lamprey coevolved with Lake Sturgeon and cause negligible mortality, but Sea Lamprey can negatively affect Lake Sturgeon populations. Sea Lamprey abundance in Lake Erie has been above targets set by resource managers, with the St. Clair – Detroit River System (SCDRS) suspected as a source of Sea Lamprey production into Lake Erie. This study summarizes lamprey marking on Lake Sturgeon captured during agency assessment surveys in the SCDRS since 1996 and provides insight on the potential for Sea Lamprey to negatively affect Lake Sturgeon in the SCDRS. Lamprey marks (any lamprey species) were noted on 48.2% of Lake Sturgeon (2.5 marks/fish) and 3.3% of Lake Sturgeon assumed to be susceptible to mortality by Sea Lamprey (<760 mm TL; 0.06 marks/fish). Silver Lamprey were the only lamprey species found attached to Lake Sturgeon and there was no difference between oral disc diameters of Silver Lamprey and marks measured on Lake Sturgeon in Lake St. Clair and the lower St. Clair River (p = .45). Based on logistic regression, probability of at least one lamprey mark increased with Lake Sturgeon total length and was highest in Lake St. Clair. The probability of observing at least one lamprey mark on a 760 mm Lake Sturgeon was 8.1% or less for each sampling location in the SCDRS aside from Lake St. Clair (28.1%). Results suggest that parasitism of Lake Sturgeon by Sea Lamprey in the SCDRS is rare, particularly for Lake Sturgeon <760 mm TL. Low incidence of lamprey marks on Lake Sturgeon assumed to be susceptible to mortality from Sea Lamprey parasitism and zero occurrence of Sea Lamprey being observed attached to a Lake Sturgeon suggest Sea Lamprey at their current abundance likely have little effect on the Lake Sturgeon population in the SCDRS. Caution should be taken when using mark size to assign marks to lamprey species as there is substantial overlap among species oral disc diameters, potentially inflating the perceived impact of Sea Lamprey on Lake Sturgeon in areas with native lampreys.

Nearshore Fish Species Richness and Species–Habitat Associations in the St. Clair–Detroit River System

Shallow water riparian zones of large rivers provide important habitat for fishes, but anthropogenic influences have reduced the availability and quality of these habitats. In the St. Clair–Detroit River System, a Laurentian Great Lakes connecting channel, losses of riparian habitat contributed to impairment of fish populations and their habitats. We conducted a seine survey annually from 2013 to 2019 at ten sites in the St. Clair and Detroit rivers to assess riparian fish communities, and to identify habitat attributes associated with fish species richness and catches of common species. We captured a total of 38,451 fish representing 60 species, with emerald shiner Notropis atherinoides composing the largest portion of the catch. We used an information-theoretic approach to assess the associations between species richness and catches of 33 species with habitat variables (substrate, shoreline vegetation types, and aquatic macrophyte richness). Sand, cobble, and algal substrates and shoreline vegetation were important predictors of species richness based on a multimodel inference approach. However, habitat associations of individual species varied. This work identified manageable habitat variables associated with species richness, while identifying potential tradeoffs for individual species. Further, this work provides baselines for development and evaluation of fish community and shoreline habitat restoration goals.

Northern Madtom Use of Artificial Reefs in the St. Clair–Detroit River System

AbstractThe St. Clair and Detroit rivers historically supported abundant fish populations. However, like many river systems, these rivers have been greatly altered through the creation of navigation channels and other anthropogenic disturbances, resulting in the loss of fish and wildlife habitat and declines in native fish populations. To ameliorate this environmental degradation, artificial fish spawning reefs were constructed in the St. Clair and Detroit rivers. One native species to potentially benefit from artificial reefs is the Northern Madtom Noturus stigmosus, a small ictalurid that is listed as endangered in the state of Michigan and the province of Ontario. Between 2016 and 2018, artificial reefs and nearby control sites were sampled in the St. Clair and Detroit rivers to compare the number of Northern Madtoms. In total, 171 Northern Madtoms were captured in 1,848 minnow traps with one of four bait types: cheese, dog food, worms, or control (no bait). Baited minnow traps successfully captured Northern Madtoms in the fast‐flowing, deep water of the St. Clair–Detroit River system, and catch rates were significantly higher when traps were baited with worms. The number of Northern Madtoms captured was lower in the Detroit River than in the St. Clair River and increased with increasing water temperature and turbidity. Artificial reefs constructed in the St. Clair–Detroit River system are providing habitat for Northern Madtoms; however, use did not differ between reef sites and nearby control sites. This work provides insight regarding sampling strategies to target Northern Madtoms in large‐river systems and highlights the importance of incorporating a temporal sampling strategy into survey design.

Spatial trends and temporal declines in tissue metals/metalloids in the context of wild fish health at the St. Clair River Area of Concern

The St. Clair River, which flows from Lake Huron to Lake St Clair, receives discharges and emissions from numerous petroleum refineries, petrochemical facilities, and other sources. We used a multi-factor ANOVA to test for spatial and temporal changes in concentrations of trace metals/metalloids in homogenates of fish from Lake Huron (reference site) and two river sites - an industrialized region (Stag Island) and downstream Walpole Island/Chenal Écarte. In 2002/2003 and in 2014, we sampled 20 adult fish of each sex of the following species: shorthead redhorse (Moxostoma macrolepidotum), yellow perch (Perca flavescens); we added emerald shiner (Notropis atherinoides; unsexed) in 2014. There was a temporal decline of most metals/metalloids in shorthead redhorse at the river sites. Linear Discriminant Analysis separated the 2014 shorthead redhorse by site. Emerald shiners had higher concentrations of metals/metalloids, apart from mercury, than the other species; those concentrations were highest at Chenal Écarte, which warrants further research. Tissue concentrations of mercury, which declined temporally at Stag Island and Walpole Island, were above the protective guidance for wildlife consumers at all sites, but were lower than predicted to affect fish health. Apart from increased liver size (ANCOVA) in shorthead redhorse at Walpole Island (2014), the health variables in the riverine fish were stable or differed slightly from reference, which indicated good health and reproductive potential. In shorthead redhorse, tissue metals correlated inconsistently with health indices. Further research could ascertain if temporal declines in metals/metalloids in riverine SHRH are benefits of remediation actions or fluctuations with other causes.

Detecting fine-scale population structure in the age of genomics: a case study of lake sturgeon in the Great Lakes

Great Lakes-wide population structure analyses using neutral markers have provided an understanding of broad-scale genetic structure of lake sturgeon. To assess the fine-scale genetic structure of lake sturgeon populations in two different rivers, we combined both microsatellites and genome-wide SNP markers. The St. Clair-Detroit River System (SCDRS) is entirely freshwater with no known impediments to sturgeon movement. In contrast, the St. Lawrence River (SLR) outlets into the Atlantic Ocean and is fragmented by hydroelectric dams. Both microsatellites and SNPs provided evidence of differentiation between the rivers. When applied to fine-scale structure, microsatellites failed to detect population structure using a Bayesian approach for within either river and FST values using microsatellites identified only a low level of differentiation between the upper and lower St. Clair River. Using the full set of SNPs for each comparison yielded similar results to the microsatellite results. Discriminant analysis of principal components using both markers partitioned the samples into spatially structured clusters. The SNP datasets filtered for high FST values had greater success for detecting fine-scale population structure and had the highest accuracy for reassignment to prior populations. This reduced SNP dataset may represent a more meaningful set of loci that can be used to estimate lake sturgeon fine-scale population structure, which is complicated by their long-generation times.