<h3>Objectives</h3> To evaluate the effect of pharmacological inhibition of nuclear factor-kappa beta (NFkB) using emetine and CBL0137 in cancer stem cells (CSCs) of head and neck squamous cell carcinoma cell lines resistant to cisplatin (CisR). <h3>Study Design</h3> CAL27 and SCC9 cell lines were used. NFkB expression was investigated by quantitative polymerase chain reaction and Western blot. MTS and spheres formation assay were assessed to determine the inhibition doses of emetine and CBL0137. Flow cytometry was performed to quantify the CSC population. <h3>Results</h3> Both CisR cell lines presented NFkB accumulation. CAL27 CisR IC50 dose was 1.8 μM for emetine and 1.5 μM for CBL0137. Emetine IC50 dose for SCC9 CisR was 1.7 μM and 1.5 μM for CBL0137. Emetine was able to eliminate CAL27 CisR CSC at 0.5 μM and CBL0137 at 0.75 μM. For both drugs, 0.75 μM eliminated CSC of the SCC9 CisR cell line. In combination with cisplatin, emetine was more effective in reducing CSC of CAL27 CisR and CBL0137 showed better response for SCC9 CisR. Interestingly, cisplatin alone did not have any effect on CisR cell lines and emetine or CBL0137 alone was more effective in reducing the CSC population than in combination with cisplatin. <h3>Conclusions</h3> Pharmacological inhibition of NFkB is efficient in reducing the CSC population, decreasing cisplatin chemoresistance.