Changes In Species Composition Research Articles

Impact Assessment of Ports and Effluent Discharge on Macrobenthic Communities in Indian Coastal Ecosystems: A Comprehensive Review

ABSTRACTThe burgeoning industrialization and urbanization along the Indian coastline have led to an increased prevalence of port infrastructure and effluent discharge, raising concerns about their potential impact on the delicate macrobenthic communities in coastal ecosystems. This comprehensive review aims to evaluate and synthesize existing literature on the ecological repercussions of port activities and effluent discharge on macrobenthic organisms in Indian coastal regions. The study encompasses a thorough analysis of relevant research articles, government reports, and scientific databases, focusing on diverse ecosystems such as estuaries, mangroves, and open coastlines. The review discusses the various stressors associated with port operations, including dredging, habitat alteration, and chemical contamination from effluent discharge. Furthermore, it explores the response mechanisms of macrobenthic communities, encompassing changes in species composition, abundance, and diversity. Special attention is given to the potential long‐term impacts on ecosystem functioning and services. The synthesis of available data enables the identification of knowledge gaps and the formulation of recommendations for future research and management strategies. Understanding the cumulative effects of port activities on macrobenthic communities is crucial for developing sustainable practices and policies to mitigate adverse impacts while fostering the resilience of coastal ecosystems in the face of anthropogenic pressures. This review contributes to the growing body of knowledge on the ecological consequences of human activities in Indian coastal areas, providing valuable insights for researchers, policymakers, and environmental managers alike.

Spatial Variation in Upper Limits of Coral Cover on the Great Barrier Reef

ABSTRACTAimIdentifying the maximum coral cover that a coral community can sustain (i.e., its ‘upper limit’) is important for predicting community dynamics and improving management strategies. Here, we quantify the relationship between estimated upper limits and key environmental factors on coral reefs: hard substrate availability, temperature and water clarity.LocationGreat Barrier Reef (GBR), Australia (over 1400 km).Time Period1990 to 2022.Major Taxa StudiedScleractinian corals.MethodsWe used 32 years of data on coral cover around reef perimeters. Each reef was divided into four wave‐exposure habitats depending on prevailing wind conditions. For each site, we determined if hard coral cover had reached a plateau or upper limit. Next, we extracted existing estimates of hard substrate availability, modelled water temperature and Secchi depth. Then, we quantified the relationship between these environmental variables and the upper limits.ResultsWe found varying upper limits across the GBR, with a median of 33% coral cover and only 17% of the estimated upper limits exceeded 50% coral cover. Upper limits increased towards the southern reefs. Our results show that upper limits increased with increasing hard substrate availability and decreased with temperature and, to a lesser extent, with water clarity.Main ConclusionsThe upper limits estimated in this study are much lower than what is commonly assumed when modelling ecological dynamics, most likely resulting in predicted recovery rates being inappropriately high. Although hard substrate ultimately restricted upper limits, there are mechanisms constraining the proportion of hard substrate that is covered by hard corals. The negative relationship between temperature and upper limits cannot be explained by changes in macroalgal abundance but may be related to changes in species composition. The quantitative relationships between the upper limits of coral cover and environmental variables will provide critical information to prioritise sites for management interventions.

Multifactorial effects of warming, low irradiance, and low salinity on Arctic kelps

Abstract. The Arctic is projected to warm by 2 to 5 °C by the end of the century. Warming causes melting of glaciers, shrinking of the areas covered by sea ice, and increased terrestrial runoff from snowfields and permafrost thawing. Warming, decreasing coastal underwater irradiance, and lower salinity are potentially threatening polar marine organisms, including kelps, that are key species of hard-bottom shallow communities. The present study investigates the physiological responses of four kelp species (Alaria esculenta, Laminaria digitata, Saccharina latissima, and Hedophyllum nigripes) to these environmental changes through a perturbation experiment in ex situ mesocosms. Kelps were exposed for 6 weeks to four experimental treatments: an unmanipulated control; a warming condition under the CO2 emission scenario SSP5-8.5; and two multifactorial conditions combining warming, low salinity, and low irradiance reproducing the future coastal Arctic exposed to terrestrial runoff under two CO2 emission scenarios (SSP2-4.5 and SSP5-8.5). The physiological effects on A. esculenta, L. digitata, and S. latissima were investigated, and gene expression patterns of S. latissima and H. nigripes were analyzed. Across all species and experimental treatments, growth rates were similar, underlying the acclimation potential of these species to future Arctic conditions. Specimens of A. esculenta increased their chlorophyll a content when exposed to low irradiance conditions, suggesting that they may be resilient to an increase in glacier and river runoff with the potential to become more dominant at greater depths. S. latissima showed a lower carbon : nitrogen (C : N) ratio under the SSP5-8.5 multifactorial conditions' treatment, suggesting tolerance to coastal erosion and permafrost thawing. In contrast, L. digitata showed no response to the conditions tested on any of the investigated physiological parameters. The down-regulation of genes coding for heat-shock proteins in H. nigripes and S. latissima underscores their ability to acclimate to heat stress, which portrays temperature as a key influencing factor. Based on these results, it is expected that kelp communities will undergo changes in species composition that will vary at local scale as a function of the changes in environmental drivers.

Shift of bacterial and fungal communities upon soil amelioration is driven by carbon degradability of organic amendments

The structural response of bacterial and fungal soil communities to four carbon-rich organic amendments of increasing recalcitrance was investigated. Wheat straw, green compost, a mixed product based on biogas residues, and a fermented biochar were applied to a sandy agricultural soil of low organic carbon content. After laboratory incubation for 6 months, the community structure was investigated via DNA sequencing. All amendments caused changes in the communities of bacteria and fungi, but to different extents, with the communities exposed to more recalcitrant amendments showing the least variation compared to the non-amended soil. Changes in species composition as well as their relative abundances were observed. While the straw had a pronounced effect on bacteria (e.g., the highest number of indicator species), effects of the composted, fermented, or pyrolyzed materials were minor. Hierarchical clustering showed that the fungal communities were more different from each other than the bacterial ones with the straw-soil being most different and the biochar-soil least different from the non-amended soil. While the abundant fungal species in biochar-soil and non-amended soil were very alike, especially rare fungal species shifted upon addition of biochar. An indicator species analysis identified specific taxonomic groups which were triggered by the different organic materials. We conclude that bacterial and fungal communities strongly change upon input of degradable carbon (straw), while fungi in particular respond to the application of processed organic materials. With this study, we report the consequences of applying organic materials for the microbial community in one soil. We provide these data for meta-analyses that are required to unravel all relevant interactions across different soils, organic materials, and time. This will allow to better understand and predict the effects of organic soil amelioration measures on soil microorganisms.

The Potential of Silver Diamine Fluoride in Non-Operative Management of Dental Caries in Primary Teeth: A Systematic Review

Background and Objectives: Dental caries has seen an increase in untreated cases, leading to significant health and quality-of-life impacts, necessitating innovative approaches like the promising non-operative management with silver diamine fluoride. This study aimed to evaluate the mechanisms of action of silver diamine fluoride on arresting dental caries in primary teeth. Materials and Methods: A systematic search was conducted across MEDLINE (PubMed), Google Scholar, and Wiley Online Library, including both in vivo and in vitro studies published from 1 January 2017 to 16 October 2022. The Cochrane Risk of Bias Tool assessed bias in in vivo studies, while the Quality Assessment Tool for In Vitro Studies evaluated the methodological quality of in vitro studies. Results: Nineteen publications met the inclusion criteria. Two studies indicated that silver diamine fluoride application significantly alters oral microflora, contributing to caries arrest. Additionally, two studies reported increased mineral density and mineral content in demineralised primary teeth, emphasising silver diamine fluoride’s role in promoting remineralisation. Three studies demonstrated significant improvements in surface microhardness, enhancing tooth resistance. However, no significant qualitative changes in bacterial species composition were noted. Modified silver diamine fluoride application techniques, including light curing or laser irradiation, enhanced efficacy, with light curing notably increasing surface microhardness. Based on a limited number of studies, no statistically significant differences in clinical effectiveness were observed with higher silver diamine fluoride concentrations or extended application durations. Conclusions: Silver diamine fluoride effectively induces quantitative changes in oral microflora and enhances the microhardness and mineral density of enamel and dentine in primary teeth, with modified application methods showing potential for improved outcomes.

Ash dieback: A single-species catastrophe or a cascade of ecological effects in the ground flora?

Climate change and human activities have accelerated the spread of non-native species, including forest pests and pathogens, significantly contributing to global biodiversity loss. Pathogens pose a significant threat to forest ecosystems due to a lack of coevolution with native hosts, resulting in ineffective defence mechanisms and severe consequences for the affected tree species. Ash dieback, caused by the fungus Hymenoscyphus fraxineus, is a relatively new invasive forest pathogen threatening ash (Fraxinus excelsior) with mortality rates in northern Europe reaching up to 80 %. The loss of ash due to dieback has severe ecological implications, potentially leading to an extinction cascade as ash provides crucial habitats and resources for many organisms. Despite this, the consequences of ash dieback on associated communities are largely unknown. To address this, we analysed changes in species richness, vegetation structure, and composition in 82 permanent vegetation plots across 23 Norwegian woodlands. We compared data collected before and 10–14 years after the emergence of ash dieback. In these woodlands, ash significantly declined in cover, leading to changes in tree species composition and facilitating the establishment of other woody tree species like hazel (Corylus avellana) and the invasive species sycamore (Acer pseudoplatanus). Despite these changes in the tree species composition, no significant alterations were observed in the understory plant community, indicating a degree of ecosystem resilience or a lagging community response. At this point, and with our focus on the vascular plants, we do not find support for cascading effects due to ash dieback. However, our findings demonstrate that one invasive species is facilitating the expansion of another, raising concerns about potential ecological imbalance and cascading effects in the future.

Secular change in seaweed species composition and coverage of Sargassaceae on the artificial reef in Wakasa Bay, Japan.

The threat of declining seaweed beds has been a concern around the world. Seagrass and seaweed (brown algae) beds are essential habitats supporting fisheries. However, approximately 22% of these habitats have been lost in Japan due to increased coastal landfill sites and ports. This study aims to rehabilitate the depletion of these habitats by constructing an artificial reef in Wakasa Bay, Japan, and monitoring Sargassaceae succession in the second and fourth years after the construction was completed. In this study, we set up four sites on the artificial reef. Then we identified the seaweed species composition and coverage of the Sargassaceae using underwater visual observation by scuba divers. The seaweed coverage was already over approximately 80% in the second year after construction. The Sargassum horneri and S. confusum dominated during the first and second sampling in the second year after construction, and Myagropsis myagroides and S. patens during the third and fourth sampling in the fourth year after construction. Thus, the recovery of species composition takes longer than that of coverage. Therefore, observing species composition recovery is essential when constructing the artificial reef.

Long‐Term Stability of Marine Forests Facing Moderate Gradual Warming in a Remote Biodiversity Hotspot

ABSTRACTAimOcean warming and marine heatwaves are rapidly reconfiguring the composition of seaweed forests—the world's largest coastal vegetated biome. Seaweed forest responses to climate change in remote locations, which constitute the majority of the forest biome, remain however poorly quantified. Here, we examine the temporal stability of the seaweed forests across a global seaweed biodiversity hotspot where several species are predicted to undergo severe range contractions in this century.LocationWestern south coast of Australia.MethodsSeaweed forest canopies were censused at 18 shallow (< 10 m) sheltered reefs between 1997 and 2006 and again between 2021 and 2024 (six sites per location). We also surveyed 24 sites to examine whether temporal changes differed over gradients of wave exposure and depth.ResultsSeaweed forest canopies across all locations showed surprisingly little change in biomass, cover, stand density and species composition over two decades, with strong spatial structuring across depth and exposure gradients persisting over time. The average thermal affinity of forest canopies (i.e., the community temperature index, CTI) did not track warming, suggesting that factors other than temperature (e.g., wave exposure and depth) are more important drivers of forest stand structure and/or that key thermal thresholds have not yet been crossed. Forests in the location with the most pronounced warming exhibited increased thermal bias over time (total bias of 0.8°C–2.2°C), indicating they were dominated by species with cooler affinities than their local temperatures.Main ConclusionsThe greater thermal bias in forests at the warmer edge of southern Australia suggests these will be more susceptible to future warming‐related compositional changes than forests in cooler locations. The relative stability we found contrasts with a current context of rapidly changing seaweed forests nationally and globally, highlighting the need to deepen our ecological understanding of the region so that future changes to its unique biodiversity and ecosystem services can be predicted and mitigated.

The biogeography of the Amazonian tree flora

We describe the geographical variation in tree species composition across Amazonian forests and show how environmental conditions are associated with species turnover. Our analyses are based on 2023 forest inventory plots (1 ha) that provide abundance data for a total of 5188 tree species. Within-plot species composition reflected both local environmental conditions (especially soil nutrients and hydrology) and geographical regions. A broader-scale view of species turnover was obtained by interpolating the relative tree species abundances over Amazonia into 47,441 0.1-degree grid cells. Two main dimensions of spatial change in tree species composition were identified. The first was a gradient between western Amazonia at the Andean forelands (with young geology and relatively nutrient-rich soils) and central–eastern Amazonia associated with the Guiana and Brazilian Shields (with more ancient geology and poor soils). The second gradient was between the wet forests of the northwest and the drier forests in southern Amazonia. Isolines linking cells of similar composition crossed major Amazonian rivers, suggesting that tree species distributions are not limited by rivers. Even though some areas of relatively sharp species turnover were identified, mostly the tree species composition changed gradually over large extents, which does not support delimiting clear discrete biogeographic regions within Amazonia.

Seasonality Structures Avian Functional Diversity and Niche Packing Across North America.

Assemblages in seasonal ecosystems undergo striking changes in species composition and diversity across the annual cycle. Despite a long-standing recognition that seasonality structures biogeographic gradients in taxonomic diversity (e.g., species richness), our understanding of how seasonality structures other aspects of biodiversity (e.g., functional diversity) has lagged. Integrating seasonal species distributions with comprehensive data on key morphological traits for bird assemblages across North America, we find that seasonal turnover in functional diversity increases with the magnitude and predictability of seasonality. Furthermore, seasonal increases in bird species richness led to a denser packing of functional trait space, but functional expansion was important, especially in regions with higher seasonality. Our results suggest that the magnitude and predictability of seasonality and total productivity can explain the geography of changes in functional diversity with broader implications for understanding species redistribution, community assembly and ecosystem functioning.

The assembly and dynamics of ecological communities in an ever‐changing world

AbstractAlternative perspectives on the maintenance of biodiversity and the assembly of ecological communities suggest that both processes cannot be investigated simultaneously. In this concept and synthesis, we challenge this view by presenting major theoretical advances in structural stability and permanence theory. These advances, which provide complementary views, allow studying the short‐ and long‐term dynamics of ecological communities as changes in species richness, composition, and abundance. Here, the global attractor, technically named informational structure (IS), is the central element to construct from information of species' intrinsic growth rates and their strength and sign of interactions. The global attractor has four main properties: (1) It contains all the limits of what is feasible and unfeasible of the dynamical behavior of an ecological system, therefore, (2) it provides a thorough characterization of all combinations of species' richness and composition in which species can coexist (i.e., feasible and stable equilibrium), (3) as well as all connections (paths) of assembly between coexisting communities. Importantly, (4) such topology of coexisting communities and their connections changes when environmental (abiotic and biotic) variation affects the ability of species to grow and interact with others. Overall, these four properties allow switching from a traditional evaluation of species coexistence at equilibrium to a much more realistic nonequilibrium perspective where changes in the structure of the global attractor underlie the transient ecological dynamics. Several fields in ecology can benefit from the study of an IS. For instance, it can serve to evaluate community responses after the end of a perturbation, to design restoration trajectories, to study the consequences of biological invasions on the persistence of native species within communities, or to assess ecosystem health status. We illustrate this latter possibility with empirical observations of 7 years in Mediterranean annual grasslands. We document that extremely wet or dry years generate ISs supporting few coexisting communities and few assembly paths. The remaining communities distinguish winners from losers of ongoing climate change and indicate the limits to future community assembly opportunities. A fully tractable operational framework is readily available to understand and predict the assembly and dynamics of ecological communities in an ever‐changing world.

Bifidobacterium longum and microbiome maturation modify a nutrient intervention for stunting in Zimbabwean infants

Small-quantity lipid-based nutrient supplements (SQ-LNS), which has been widely tested to reduce child stunting, has largely modest effects to date, but the mechanisms underlying these modest effects are unclear. Child stunting is a longstanding indicator of chronic undernutrition and it remains a prevalent public health problem. The infant gut microbiome may be a key contributor to stunting; and mother and infant fucosyltransferase (FUT) phenotypes are important determinants of infant microbiome composition. We investigated whether mother-infant FUT status (n=792) and infant gut microbiome composition (n=354 fecal specimens from 172 infants) modified the impact of an infant and young child feeding (IYCF) intervention, that included SQ-LNS, on stunting at age 18 months in secondary analysis of a randomized trial in rural Zimbabwe. We found that the impact of the IYCF intervention on stunting was modified by: (i) mother-infant FUT2+/FUT3- phenotype (difference-in-differences-32.6% [95% CI:-55.3%,-9.9%]); (ii) changes in species composition that reflected microbiome maturation (difference-in-differences-68.1% [95% CI:-99.0%,-28.5%); and (iii) greater relative abundance of B.longum (differences-in-differences 49.1% [95% CI: 26.6%, 73.6%]). The dominant strains of B.longum when the intervention started were most similar to the proficient milk oligosaccharide utilizer subspecies infantis, which decreased with infant age and differed by mother-infant FUT2+/FUT3- phenotypes. These findings indicate that a persistently "younger" microbiome at initiation of the intervention reduced its benefits on stunting in areas with a high prevalence of growth restriction. Bill and Melinda Gates Foundation, UK DFID/Aid, Wellcome Trust, Swiss Agency for Development and Cooperation, US National Institutes of Health, UNICEF, and Nutricia Research Foundation.

Effect of abrupt post‐fire ash inputs on water quality and the phytoplankton community in lentic freshwaters

Abstract One of the major threats to biodiversity is changing fire regimes, particularly increasingly frequent fires, especially during the dry season. However, studies on the direct and indirect effects of fire on biotic responses in aquatic ecosystems are still scarce. In this study, we investigated how water quality and phytoplankton community structure were affected by different ash concentrations from burning vegetation of a tropical savanna. We used a microcosm experiment to simulate the aquatic ecosystem with different ash concentration scenarios and evaluated the water quality and the composition, richness and density of phytoplankton over time. We found increased total phosphorus and ammoniacal nitrogen concentrations after ash addition, in addition to changes in electrical conductivity. We identified 242 phytoplankton taxa throughout the experiment and identified changes in species composition among treatments. We identified changes in the taxonomic richness of total phytoplankton, green algae and desmids over time. The density of total phytoplankton, diatoms, green algae, desmids and cyanobacteria also changed over time. Our results suggest that ash from terrestrial fires affects water quality and phytoplankton communities depending on the proportion of ash input. Our results serve as a basis for further investigations of the effects of fire on abiotic conditions in aquatic ecosystems and their communities over long periods of time. Finally, longer‐term experiments are needed to evaluate delayed responses by the phytoplankton community.

Carboniferous conulariids (Cnidaria: Scyphozoa) from Ukraine

An assemblage of Carboniferous conulariids (Cnidaria) from Ukraine, consisting of Paraconularia inaequicostata (de Koninck, 1883) s.l., P. irregularis (de Koninck, 1843), P. kohli Brew & Beus, 1976, P. quadrisulcata (Sowerby, 1821), P. lata n. sp., P. cf. crustula (White, 1880), ?P. cf. subulata (Hall, 1858), ?Holoconularia rossica Van Iten et al., 2023, and ?H. poletaevi n. sp., is described. Conulariids have been collected from 15 localities, the detailed palaeontological and stratigraphic characteristics of which are summarized here. Nearly all the conulariids were found in the Donets Basin in the Serpukhovian–early Bashkirian and middle–late Moscovian intervals, which are separated from each other by an interval apparently lacking conulariids. Two new species, Paraconularia lata n. sp. and ?Holoconularia poletaevi n. sp., occur in Moscovian strata. The results of the present study confirm the ability of certain conulariids to withstand major environmental perturbations, as there are no significant changes in species composition across the mid-Carboniferous (Mississippian/Pennsylvanian) boundary. Three species, very similar to species in North America, commonly occur in Carboniferous deposits of Ukraine, namely ?Paraconularia subulata (middle Visean), P. kohli, and P. cf. crustula (Moscovian). The discovery of these three species in the Donets Basin of Ukraine underscores the cosmopolitan distribution of at least some conulariids during Carboniferous times.

Litter mixture effects on nitrogen dynamics during decomposition predominantly vary among biomes but little with litter identity, diversity and soil fauna

Nitrogen (N) is essential for net primary production, with much of the required N in terrestrial ecosystems derived from recycling via litter decomposition. The diversity and identity of plant species and decomposer organisms affect N cycling during litter decomposition, yet the generality and magnitude of these effects remain uncertain. To fill this gap, a decomposition experiment with four leaf litter species that differed widely in initial litter quality was conducted including single species and all possible multispecies mixtures, with and without microarthropods access across a broad latitudinal gradient covering four major forest biomes of the Northern Hemisphere. The results showed that leaf litter N dynamics (both N loss and N immobilization) in single species treatments depended primarily on litter species identity and the local environmental context. We found strong mixture effects, that overall tended to increase N loss and to reduce 15N transfer. The relative mixture effects on N dynamics differed among forest biomes, but were little affected by the other factors we manipulated. The N loss of individual litter species in mixtures not only depended on litter identity and soil microarthropod access, but also on forest biomes; while 15N transfer depended strongly on litter mixing, independently of litter species richness or composition of the mixtures. Litter N dynamics were mainly driven by a small subset of litter traits, regardless of species richness and microarthropod access. Overall, our results highlight that litter mixture strongly affects N dynamics during decomposition, with the mixture effects predominantly varying among forest biomes but little with litter identity, diversity and microarthropod access. To improve predictions on how changes in tree species composition and diversity may impact nutrient dynamics in forest ecosystems in face of increasing N deposition, interactions between litter and soil but also within litter mixtures need closer attention.

Structure and long-term changes of polychaete communities of the Varanger fjord in 2003 and 2019

Long-term changes in species composition, production indicators, and structure of polychaete communities for the period of 2003 and 2019 in the Russian part of the Varanger fjord (Barents Sea) were shown. The connection of such changes with climate factors and the influence of the red king crab are considered. The changes in species composition, structure, and production characteristics of polychaetes in the Russian part of the Varanger fjord (Barents Sea) in 2003 and 2019 are shown. The linkage between these changes and the climatic factor, as well as the influence of the introduced red king crab Paralithodes camtschaticus (Tilesius, 1815), is discussed. The results demonstrate an increase in the quantitative characteristics of polychaete Spiochaetopterus typicus M. Sars, 1856, indicating a decrease in pressure from the king crab on bottom communities. The biodiversity indices indicate the absence of negative changes in the settlements of polychaetes in the Varanger fjord during the studied period.

Understanding processes underlying cross-taxon congruence in species composition along elevational gradients

Changes in species diversity of different taxa along environmental gradients are usually correlated, resulting in a pattern called cross-taxon congruence. This pattern can be due to functional relationships between taxa, a common response to niche-related processes, or stochastic processes. However, it remains unclear the extent to which they contribute to the association among patterns of changes in species composition, (i.e., beta diversity), and whether these changes are related to species nestedness and turnover. Here we described patterns of change in the taxonomic composition of plant and orthopteran assemblages along an elevational gradient in Cordoba province, central Argentina. We assessed cross-taxon congruence and identified the main environmental variables accounting for such patterns. Mantel correlations showed congruence between the patterns of taxonomic dissimilarity of plants and orthopterans. According Generalized disiimilarity models (GDM) the main environmental variables driving the patterns were temperature for both taxa, and changes in soil nutrient content for plants, spatial effects were also found. Beta diversity was mainly due to species turnover for orthopterans and plants, indicating replacement by species adapted to elevational conditions. Niche-related process, such as environmetal filtering, along with neutral processes may have contributed to cross-taxon congruence in beta diversity.

Soil eDNA biomonitoring reveals changes in multitrophic biodiversity and ecological health of agroecosystems

Soil health is integral to sustainable agroecosystem management. Current monitoring and assessment practices primarily focus on soil physicochemical properties, yet the perspective of multitrophic biodiversity remains underexplored. Here we used environmental DNA (eDNA) technology to monitor multitrophic biodiversity in four typical agroecosystems, and analyzed the species composition and diversity changes in fungi, bacteria and metazoan, and combined with the traditional physicochemical variables to establish a soil health assessment framework centered on biodiversity data. First, eDNA technology detected rich multitrophic biodiversity in four agroecosystems, including 100 phyla, 273 classes, 611 orders, 1026 families, 1668 genera and 1146 species with annotated classification, and the relative sequence abundance of dominant taxa fluctuates tens of times across agroecosystems. Second, significant differences in soil physicochemical variables such as organic matter (OM), total nitrogen (TN) and available phosphorus (AP) were observed among different agroecosystems, nutrients were higher in cropland and rice paddies, while heavy metals were higher in fish ponds and lotus ponds. Third, biodiversity metrics, including α and β diversity, also showed significant changes across agroecosystems, the soil biota was generally more sensitive to nutrients (e.g., OM, TN or AP), while the fungal communities were mainly affected by heavy metals in October (e.g., Cu and Cr). Finally, we screened 48 sensitive organismal indicators and found significant positive consistency between the developed eDNA indices and the traditional soil quality index (SQI, reaching up to R2 = 0.58). In general, this study demonstrated the potential of eDNA technology in soil health assessment and underscored the importance of a multitrophic perspective for efficient monitoring and managing agroecosystems.

Long-term directional changes in urban bird communities of Mar del Plata City, Argentina

Urban environments have been characterized by their temporal stability of resources, which could promote stability in bird composition. Several studies have found that bird communities in urban environments persist over the years, showing a similar species composition in the short term. However, studies analyzing continuous changes in urban communities over the long term are scarce. This study aimed to analyze the stability or directional changes (instability) in bird communities along an urban gradient. Bird counts were conducted in urban, suburban, and periurban areas over 8-10 years in 2002-2019. Changes in species composition were analyzed over periods ranging from one year to the next, to changes from one year to the seventeenth. Urban bird communities were more similar between years than suburban and periurban communities. Compositional changes were greater as time lags increased, indicating directional compositional shifts. The magnitude of these changes was similar across the urban gradient. The Chimango Caracara (Milvago chimango), the Picazuro Pigeon (Patagioenas picazuro), the Rufous Hornero (Furnarius rufus), and the Red-bellied Thrush (Turdus rufiventris) significantly increased their abundances during the period, while the House Sparrow (Passer domesticus) significantly decreased its abundance. Regional changes in species abundance, urban vegetation succession, and biotic interactions could explain the changes in bird communities.

Patterns of early post-disturbance reorganization in Central European forests.

Disturbances catalyse change in forest ecosystems, and a climate-driven increase in disturbance activity could accelerate forest reorganization. Here, we studied post-disturbance forests after the biggest pulse of tree mortality in Central Europe in at least 170 years, caused by drought and bark beetle (Scolytinae) outbreaks in 2018-2020. Our objectives were to characterize the early state of tree regeneration after mortality, quantify patterns of reorganization relative to undisturbed reference conditions and assess how management and patch size affect forest reorganization after disturbance. We surveyed 1244 plots in 120 patches under managed (salvage-logged, often planted) and unmanaged (deadwood remaining on site, no planting) conditions in Germany. We found that regeneration density on disturbed sites was high (median 11 897 stems ha-1), resulting from a cohort of advance regeneration. Disturbances were strong drivers of change, with indications for resilience on only 36.3% of patches. Reassembly (i.e. a change in species composition) was the dominant pattern of reorganization (61.5%), and Picea abies forests changed most strongly. Post-disturbance management facilitated forest change, particularly promoting a change in species composition. The strength of reorganization increased with patch size. We conclude that the recent wave of tree mortality will likely accelerate forest change in Central Europe.