Changes In Phospholipid Fatty Acid Pattern Research Articles

Key factors controlling microbial community responses after a fire: Importance of severity and recurrence

Wildfires are a major problem in Mediterranean forest ecosystems, affecting the same area year after year. Their severity is increasing, partly due to climate change and hence, every now and then, virulent fires of high severity spread ravage this region. The aim of this study was to evaluate the influence of fire regime (recurrence, severity) in soil microbial community structure analyzing the phospholipid fatty acid (PLFA) and the microbial functional diversity assessing the level physiological profiling technique (CLPP). Samples of a soil affected by a high severities wildfire and a soil affected by a low severity experimental fire were heated under laboratory conditions at different temperatures to simulate different fire severity. To simulate fire recurrence, the heating treatment was repeated after one month of incubation. The fire severity was estimated as the amount of heat supplied to samples by degree-hour methodology. A marked impact of fire regime on soil microorganisms was detected; the microbial community response varied depending on previous history of fire and the magnitude of changes in PLFA pattern and CLPP, was related to the amount of heat supplied to the samples. Wildfires had a greater impact on microbial community structure than subsequent soil heating in the laboratory. The total biomass and the biomass of specific groups of microorganisms decreased notably as a consequence of wildfire and minor changes were detected due to the experimental fire and soil heating under laboratory conditions. The results clearly showed the usefulness of PLFA pattern to study the effect of fire regimes and associated direct and indirect changes in soil microorganisms and in soil quality. The data also indicated that the degree-hour methodology rather than maximum temperature is adequate to simulate fire severity and evaluate the impact of thermal shock on soil ecosystems.

Interactions between selected PAHs and the microbial community in rhizosphere of a paddy soil

This study investigated the interaction of three polycyclic aromatic hydrocarbons (PAHs), i.e., naphthalene (NAP), phenanthrene (PHN), and pyrene (PYR), with the microbial community in the rhizosphere of a paddy soil and the influence of the rice ( Oryza sativa) rhizosphere on the microbial community structure. A range of initial NAP, PHN and PYR levels in soil (50–200, 18–72, and 6.6–26.6 mg kg − 1 , respectively) were prepared and the soil samples were then aged for 4 months (to yield PAH concentrations at 1.02–1.42, 1.32–4.77, and 2.98–18.5 mg kg − 1, respectively) before the soil samples were planted with rice seedlings. The microbial phospholipid-fatty-acid (PLFA) patterns in PAH-contaminated soils were analyzed to elucidate the changes of the microbial biomass and community composition. Results indicated that at the applied concentrations the PAHs were not toxic to rice seedlings, as evidenced by no growth inhibition during the 8-week planting period. However, the microbial biomass, as revealed by PLFAs, decreased significantly with increasing PAH concentration in both rhizospheric and non-rhizospheric soils. The PAHs in soils were obviously toxic to microorganisms, and the toxicity of PHN was greater than PYR due likely to the higher PHN bioavailability. Total PLFAs in rhizospheric soils were profoundly higher than those in non-rhizospheric soils, suggesting that the inhibitive effect of PAHs on microbial activities was alleviated by the rice roots. The principal component analysis (PCA) of the PLFA signatures revealed pronounced changes in PLFA pattern in rhizospheric and non-rhizospheric soils with or without spiked PAHs. Using the PLFA patterns as a biomarker, it was found that Gram-positive bacteria were more sensitive to PAHs than Gram-negative bacteria, and the rhizosphere of rice roots stimulated the growth of aerobic bacteria.

Shifts in the structure of soil microbial communities in limed forests as revealed by phospholipid fatty acid analysis

The effects of lime and wood-ash on the microbial community structure were evaluated by analyzing the phospholipid fatty acid (PLFA) composition of soils from two areas in the south of Sweden. A pine forest was amended with lime or ash at two concentrations, and a spruce forest was limed at one concentration. The treatments were carried out 5–6 years before sampling and raised the pH from approx. 4.0 to values between 4.8 and 7.0. At both sites there was a difference in the PLFA composition between the treated plots and the controls. The changes found were similar at both sites and correlated to the pH changes. No difference was found between limed plots and those treated with wood-ash. The methyl-branched fatty acids i15:0, i16:0 and 10Me16:0, the monounsaturated fatty acids 16: 1ω 7t and 18: 1ω 9, the cyclopropane fatty acid cy 19:0, and the saturated fatty acid 20:0 were more abundant in the control plots. In the plots with the highest pH there was a three-fold increase in the fatty acid 16: lω 5. An increase was also found for the fatty acids i14:0, 16:lω9, 16:lω 7c, cy17:0, 18:lω 7 and 10Me18:0. No effect on 18:2ω6 was found. The changes in PLFA pattern indicated that the increased pH caused a shift in the bacterial community to more Gram-negative and fewer Gram-positive bacteria, while the amount of fungi was unaffected. The increase in 10Me18:0 in limed soils indicated an increase in actinomycetes.