Effects of marine environment and climate changes on phytoplankton dynamics in global oceans have received increasing attention but remain a mystery. This study used a comprehensive approach combining correlation and information flow to explore relationships among phytoplankton biomass, marine environment, and climate forcing based on global observations over the past multi-decadal period. Correlation and causality between phytoplankton biomass and environmental factors exhibit spatial asymmetry—regions where environmental factors directly drive biomass variations were concentrated in oceanic currents and subtropical circulations. Temperature, light, and mixed layer depth show pronounced influences on global phytoplankton interdecadal variations. Climate forcing over interdecadal timescales directly affects phytoplankton biomass in the equatorial Pacific, South Pacific, and Indian Oceans, with more uncertain biomass variability in the equatorial Pacific due to multiple climate events. Our findings revealed that environment and climate changes directly affect phytoplankton interdecadal variability only in specific regions at the oceanic scale.