Cancer cells rely on autophagy to degrade damaged organelles and survive in the harsh environment for progression and metastasis. Autophagy inhibition can improve the efficacy of anticancer therapy because many anticancer drugs can induce protective autophagy in cancer cells. However, current clinically available autophagy inhibitors are rare and have adverse effects with limited selectivity. This work develops an intracellular biomolecular condensate for autophagy inhibition to kill cancer without apparent side effects. A modularly designed amphiphilic peptide (PNP) can self-assemble to form toxic nanofibrous condensates successively from nanoparticles with the pH changes of the endocytic pathway. Mechanistic studies by CLSM and FRAP demonstrate that the PNP finally forms solid nanofibrous condensates in the lysosome after cell endocytosis. Bio-EM and cell transfection with adenovirus expressing mCherry-GFP-LC3B fusion protein (autophagy marker) experiments indicate the autophagy inhibition by PNP nanofibrous condensates. In vitro experiments show that PNP can significantly boost the activity of the clinical drug by 150-fold against drug-resistant lung cancer cells by inducing G2/M phase arrest of the cell cycle. Furthermore, PNPs demonstrate effective tumor targeting and permeability in vivo, inhibiting tumor growth and reducing the side effects of clinical chemotherapy drugs. Overall, this work provides a simple and feasible strategy for designing intracellular condensates to inhibit autophagy for cancer therapy.