The Cell Biology Symposium titled “Novel technologies and novel insights” was held at the Joint Annual Meeting of the American Society of Animal Science and the American Dairy Science Association in New Orleans, Louisiana, July 10 to 14, 2011. The purpose of the symposium was to provide the animal science community with an update on novel molecular technologies that allow new insights into genome structure and function in livestock. The first speaker of the symposium, Jeffrey Whyte (University of Missouri, Columbia), provided an overview of conventional and emerging technologies to modify the genome in mammals with specific examples in swine (Whyte and Prather, 2011). Engineered zinc finger nucleases (ZFN) have recently been developed that bind and cleave DNA at specific sequences and lead to targeting efficiencies up to 10,000-fold greater than conventional gene targeting methods with somatic cell nuclear transfer. The ZFN technology provides a precise mechanism to either disrupt a gene coding sequence (i.e., gene knockout) or enhance insertion of a DNA construct (i.e., transgenesis or gene knock-in). Several laboratories have now used ZFN technology to knockout genes in the swine genome. Availability of the draft swine genome sequence in combination with ZFN technology to modify the swine genome should allow more rapid and efficient development of swine models for the dual benefit of agricultural and biomedical research. Christian Haudenschild (Illumina, Hayward, CA) provided an overview of next-generation sequencing technologies and the novel use of these technologies to measure gene expression in various biological systems (Haudenschild, 2011). These technologies allow scientists to study temporal expression of the entire transcriptome in specific cells or tissues. In addition, nextgeneration sequencing technologies also reveal new insights regarding the transcription of specific alleles, splice variants, and a better definition of gene structure and annotation. Use of next-generation sequencing technologies to study gene expression has generated extremely large sets of data that require development of novel analytical and statistical methods for appropriate analysis and interpretation. The final speaker, Rebecca Wattam (Virginia Polytechnic Institute and State University, Blacksburg), described the opportunities and challenges associated with accessing all of the available public information to analyze and interpret large sets of genomic data (Sobral, 2011). Novel bioinformatic tools were developed to mine large data resources of genomic information. The examples of Brucella spp. and the 40 sequenced genomes of Brucella were used to show how genome sequencing could be used to identify common genes (and gene families) across species of Brucella, as well as missing areas of genome sequence in some species of Brucella. Specific genes and gene families that are associated with various physiological events, including preferences of the various species of Brucella for specific hosts, were identified. In addition, some species of Brucella are missing many large areas of genomic sequences that may be involved with virulence or synthesis of lipopolysaccharide. The recent availability of draft genome sequences for livestock coupled with emerging computational technologies developed by biomedical scientists provide the animal science community with an increasing number of novel tools to gain new insights into the structure and function of livestock genomes. The ultimate goal of these studies is to improve the efficiency of food and fiber production. The Cell Biology Symposium provided the animal science community with an update on novel molecular technologies to better understand the structure and function of livestock genomes. Use of ZFN technology provides opportunities to precisely
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