Catalytic transfer hydrogenation (CTH) was recognized as a promising technique for converting various lignin derivatives to fuels and high-value compounds in heterogeneous systems. Herein, Co@C catalysts with diverse organic ligands, Keggin-type heteropolyacids, acid addition quantities, and metal/organic ligand molar ratios were synthesized via one-pot hydrothermal processes and carbonization methods. The optimized catalyst demonstrated highly efficient active hydrogen generation from isopropanol and the best conversion (100 %) for vanillin (VAN) hydrodeoxygenation (HDO) with 90 % 2-methoxy-4-methylphenol (MMP) yield at 180 °C for one hour under mild conditions of 0 MPa N2 (hydrogen-free circumstance), which were strongly connected to the higher specific surface area (154.45 m2/g), acidic site density (4.67 mmol/g), and stronger metal-P interactions of the Co(H4)@C-HPW0.25 catalyst. The findings in this work provided an advanced thinking for designing high-performance non-noble-metal catalysts that could be applied in the catalytic HDO transformation of various biomass derivatives into green fuel and chemicals under mild circumstances.