The relevance of the study is the prevalence of diet-induced metabolic disorders, in particular, iodine deficiency and insulin resistance. The aim of the study was to find out the features of lipids and proteins peroxidation in blood serum and lung tissue in rats with iodine deficiency, insulin resistance and their combination. Thyroid profile indicators, carbohydrate metabolism markers, proteins and lipids peroxidation were determined in animals kept on a standard diet (1st, control group), iodine-deficient diet (2nd group), under high-fructose feeding conditions (3rd group) and combination of iodine deprivation and the high-fructose diet (4th group). Indicators lipids and proteins free radical oxidation were determined in serum and homogenate of the pulmonary respiratory part. Iodine insufficient diet caused hypothyroid dysfunction, as evidenced by a decrease level of thyroid hormones and increase TSH in the blood serum of rats (2nd and 4th experimental groups). Increase in serum insulin and HOMA-IR index reflects the insulin resistance (3rd and 4th groups). Long-term iodine deprivation and a high-carbohydrate diet (three months) caused a violation of thyroid homeostasis and the development of insulin resistance, which are potentiated in their combination. Under such conditions oxidative stress develops, reflecting elevation of lipid and protein peroxidation products in blood serum (by 16,40-83,10 %, р<0,05) and homogenate of the respiratory pulmonary section (by 39,61 % - 2,55 times, р<0,05) according to the control. Increase the intensity of peroxidation in a combination of iodine-deficient and high-carbohydrate diets suggests a synergism of comorbid pathology and an increase in bronchopulmonary risks.