Nitrate Reduction Capacity Research Articles

Functional starter cultures for meat: a study of technological and probiotic characterisation

The use of starter cultures in meat product technology reduces process time and improves organoleptic performance. The selection of starter cultures involves various stages and is a rather complex process: preliminary characterization in laboratory conditions; selection of the most promising strains; laboratory verification and final verification in large-scale fermentation. Nowadays, the selection of a functional starter culture includes another step related to the evaluation of functional properties. This paper presents an example of using a stepwise approach to select promising starter cultures with probiotic abilities. Researchers obtained several types of pure bacterial cultures from a basic starter and determined indicators of enzymatic and technological activities. Proteolytic activity, nitrate reduction capacity, amount of mucus, pH change, temperature effect on growth, amount of salt, as well as probiotic traits: antibiotic resistance, survival in acidic medium, degree of interaction with water (hydrophobicity), degree of interaction with Salmonella and Escherichia coli were investigated in the isolated strains. The studies were carried out in comparison with some collection strains. As a result, strains from the base inoculate were capable of fermentation at low temperatures and exhibited a particular degree of bio activity, while specific probiotic characteristics in terms of hydrophobicity and survival under gut-mimicking conditions were identified for the collection strains.

Exploring the influence of fertilization on bacterial community fluctuations in Ulva cultivation

Ulva are green algae known for their biomass accumulation on the coast due to eutrophication. As these algae are able to bioremediate nitrate loadings, they are used as biofilters of enriched waters in aquaculture. Ulva form a holobiont by naturally hosting various microbes, also involved in nitrate metabolism. However, little is known about fluctuations of the Ulva holobiont in fertilized waters over time. We surveyed fluctuations of the bacterial community associated with Ulva lacinulata cultivation, with (enriched, ENR) and without (seawater only, SW) nitrate-based fertilization. Ulva biofilm and cultivation water were regularly collected and contextual parameters (nutrients, temperature, pH) were regularly measured over twelve weeks. Metabarcoding of the 16S rDNA in the biofilm and water compartments revealed that fertilization led to higher alpha-diversity. Diversity patterns indicated that samples clustered together for each compartment in SW or ENR. Fertilization led to a different genus composition in the water after 5 days, and it led to a more even community in the biofilm, from few very dominant genera at the beginning of the experiment to more less dominant genera at the end. The core microbiota in the biofilm common to SW and ENR was mainly composed of genera involved in the host fitness and physiology. Core genera common to SW and ENR in the water were likely beneficiating from the culture conditions. Microbiota's predicted metabolic pathways revealed a heightened capacity for nitrate reduction in ENR. These results may serve as a foundation to understand nitrate loadings impact on Ulva's microbiota in eutrophication conditions.

Biochar modulates intracellular electron transfer for nitrate reduction in denitrifying anaerobic methane oxidizing archaea

Denitrifying anaerobic methane oxidizing (DAMO) archaea plays a significant role in simultaneously nitrogen removal and methane mitigation, yet its limited metabolic activity hinders engineering applications. This study employed biochar to explore its potential for enhancing the metabolic activity and nitrate reduction capacity of DAMO microorganisms. Sawdust biochar (7 g/L) was found to increase the nitrate reduction rate by 2.85 times, although it did not affect the nitrite reduction rate individually. Scanning electron microscopy (SEM) and fluorescence excitation-emission matrix (EEM) analyses revealed that biochar promoted microbial aggregation, and stimulated the secretion of extracellular polymeric substances (EPS). Moreover, biochar bolstered the redox capacity and conductivity of the biofilm, notably enhancing the activity of the electron transfer system by 1.65 times. Key genes involved in intracellular electron transport (Hdr, MHC, Rnf) and membrane transport proteins (BBP, ABC, NDH) of archaea were significantly up-regulated. These findings suggest that biochar regulates electrons generated by reverse methanogenesis to the membrane for nitrate reduction.

Functional similarity, despite taxonomical divergence in the millipede gut microbiota, points to a common trophic strategy

BackgroundMany arthropods rely on their gut microbiome to digest plant material, which is often low in nitrogen but high in complex polysaccharides. Detritivores, such as millipedes, live on a particularly poor diet, but the identity and nutritional contribution of their microbiome are largely unknown. In this study, the hindgut microbiota of the tropical millipede Epibolus pulchripes (large, methane emitting) and the temperate millipede Glomeris connexa (small, non-methane emitting), fed on an identical diet, were studied using comparative metagenomics and metatranscriptomics.ResultsThe results showed that the microbial load in E. pulchripes is much higher and more diverse than in G. connexa. The microbial communities of the two species differed significantly, with Bacteroidota dominating the hindguts of E. pulchripes and Proteobacteria (Pseudomonadota) in G. connexa. Despite equal sequencing effort, de novo assembly and binning recovered 282 metagenome-assembled genomes (MAGs) from E. pulchripes and 33 from G. connexa, including 90 novel bacterial taxa (81 in E. pulchripes and 9 in G. connexa). However, despite this taxonomic divergence, most of the functions, including carbohydrate hydrolysis, sulfate reduction, and nitrogen cycling, were common to the two species. Members of the Bacteroidota (Bacteroidetes) were the primary agents of complex carbon degradation in E. pulchripes, while members of Proteobacteria dominated in G. connexa. Members of Desulfobacterota were the potential sulfate-reducing bacteria in E. pulchripes. The capacity for dissimilatory nitrate reduction was found in Actinobacteriota (E. pulchripes) and Proteobacteria (both species), but only Proteobacteria possessed the capacity for denitrification (both species). In contrast, some functions were only found in E. pulchripes. These include reductive acetogenesis, found in members of Desulfobacterota and Firmicutes (Bacillota) in E. pulchripes. Also, diazotrophs were only found in E. pulchripes, with a few members of the Firmicutes and Proteobacteria expressing the nifH gene. Interestingly, fungal-cell-wall-degrading glycoside hydrolases (GHs) were among the most abundant carbohydrate-active enzymes (CAZymes) expressed in both millipede species, suggesting that fungal biomass plays an important role in the millipede diet.ConclusionsOverall, these results provide detailed insights into the genomic capabilities of the microbial community in the hindgut of millipedes and shed light on the ecophysiology of these essential detritivores.6T24awGbkoVb6oAp62-bVTVideo

Implications for nitrogen and sulphur cycles: phylogeny and niche-range of Nitrospirota in terrestrial aquifers.

Increasing evidence suggests Nitrospirota are important contributors to aquatic and subsurface nitrogen and sulphur cycles. We determined the phylogenetic and ecological niche associations of Nitrospirota colonizing terrestrial aquifers. Nitrospirota compositions were determined across 59 groundwater wells. Distributions were strongly influenced by oxygen availability in groundwater, marked by a trade-off between aerobic (Nitrospira, Leptospirillum) and anaerobic (Thermodesulfovibrionia, unclassified) lineages. Seven Nitrospirota metagenome-assembled genomes (MAGs), or populations, were recovered from a subset of wells, including three from the recently designated class 9FT-COMBO-42-15. Most were relatively more abundant and transcriptionally active in dysoxic groundwater. These MAGs were analysed with 743 other Nitrospirota genomes. Results illustrate the predominance of certain lineages in aquifers (e.g. non-nitrifying Nitrospiria, classes 9FT-COMBO-42-15 and UBA9217, and Thermodesulfovibrionales family UBA1546). These lineages are characterized by mechanisms for nitrate reduction and sulphur cycling, and, excluding Nitrospiria, the Wood-Ljungdahl pathway, consistent with carbon-limited, low-oxygen, and sulphur-rich aquifer conditions. Class 9FT-COMBO-42-15 is a sister clade of Nitrospiria and comprises two families spanning a transition in carbon fixation approaches: f_HDB-SIOIB13 encodes rTCA (like Nitrospiria) and f_9FT-COMBO-42-15 encodes Wood-Ljungdahl CO dehydrogenase (like Thermodesulfovibrionia and UBA9217). The 9FT-COMBO-42-15 family is further differentiated by its capacity for sulphur oxidation (via DsrABEFH and SoxXAYZB) and dissimilatory nitrate reduction to ammonium, and gene transcription indicated active coupling of nitrogen and sulphur cycles by f_9FT-COMBO-42-15 in dysoxic groundwater. Overall, results indicate that Nitrospirota are widely distributed in groundwater and that oxygen availability drives the spatial differentiation of lineages with ecologically distinct roles related to nitrogen and sulphur metabolism.

Nitrate reduction capacity of the oral microbiota is impaired in periodontitis: potential implications for systemic nitric oxide availability

The reduction of nitrate to nitrite by the oral microbiota has been proposed to be important for oral health and results in nitric oxide formation that can improve cardiometabolic conditions. Studies of bacterial composition in subgingival plaque suggest that nitrate-reducing bacteria are associated with periodontal health, but the impact of periodontitis on nitrate-reducing capacity (NRC) and, therefore, nitric oxide availability has not been evaluated. The current study aimed to evaluate how periodontitis affects the NRC of the oral microbiota. First, 16S rRNA sequencing data from five different countries were analyzed, revealing that nitrate-reducing bacteria were significantly lower in subgingival plaque of periodontitis patients compared with healthy individuals (P < 0.05 in all five datasets with n = 20–82 samples per dataset). Secondly, subgingival plaque, saliva, and plasma samples were obtained from 42 periodontitis patients before and after periodontal treatment. The oral NRC was determined in vitro by incubating saliva with 8 mmol/L nitrate (a concentration found in saliva after nitrate-rich vegetable intake) and compared with the NRC of 15 healthy individuals. Salivary NRC was found to be diminished in periodontal patients before treatment (P < 0.05) but recovered to healthy levels 90 days post-treatment. Additionally, the subgingival levels of nitrate-reducing bacteria increased after treatment and correlated negatively with periodontitis-associated bacteria (P < 0.01). No significant effect of periodontal treatment on the baseline saliva and plasma nitrate and nitrite levels was found, indicating that differences in the NRC may only be revealed after nitrate intake. Our results suggest that an impaired NRC in periodontitis could limit dietary nitrate-derived nitric oxide levels, and the effect on systemic health should be explored in future studies.

Low Carbohydrate, High Fat Diet Alters the Oral Microbiome without Negating the Nitrite Response to Beetroot Juice Supplementation.

A low carbohydrate, high fat (LCHF) diet in athletes increases fat oxidation but impairs sports performance, potentially due to impaired exercise economy. Dietary nitrate supplementation can improve exercise economy via an increase in nitric oxide production, which is initiated by the reduction of nitrate to nitrite within the oral cavity. This reaction is dependent on the presence of nitrate-reducing oral bacteria, which can potentially be altered by dietary changes, including a LCHF diet. This study explored the effect of a LCHF diet on the oral microbiome and subsequent changes to plasma nitrite concentration following nitrate supplementation. Following five days of LCHF or high carbohydrate (HCHO) control dietary intervention, highly trained male race walkers consumed 140 mL beetroot juice containing 8.4 mmol nitrate; they then provided (a) blood samples for plasma nitrate and nitrite analysis and (b) saliva samples for 16S rRNA sequencing of the oral microbiome. The LCHF diet (n = 13) reduced oral bacterial diversity and changed the relative abundance of the genera Neisseria (+10%), Fusobacteria (+3%), Prevotella (-9%), and Veillonella (-4%), with no significant changes observed following the HCHO diet (n = 11). Following beetroot juice ingestion, plasma nitrite concentrations were higher for the LCHF diet compared to the HCHO diet (p = 0.04). However, the absence of an interaction with the trial (pre-post) (p = 0.71) suggests that this difference was not due to the dietary intervention. In summary, we found an increase in plasma nitrate and nitrite concentrations in response to nitrate supplementation independent of diet. This suggests the oral microbiome is adaptive to dietary changes and can maintain a nitrate reduction capacity despite a decrease in bacterial diversity following the LCHF diet.

Upscaling approach to help determine variability in riparian lowland flow dynamics

Riparian lowlands are important for protecting aquatic ecosystems threatened by contamination. Their ability to attenuate and reduce nutrient rich water provides a useful ecosystem service. Previous field studies have shown that the hydrological conditions within a lowland can affect their reduction capabilities dependent on the dominant flow pathways, i.e., surface runoff, groundwater discharge, and drain flow. For example, the likelihood of nutrient reduction within a riparian lowland dominated by surface runoff is low, conversely if groundwater discharge dominates the likelihood is higher. Hence, knowledge of the flow pathways can be used to provide a qualitative estimate of the reduction capacity in riparian lowlands, information that is vital in assessing catchment scale processes. The objective of this study is to establish a relationship between the dominant riparian flow pathways and lowland features, such as slope and hydrogeology/geology. Previous work had shown the ability of a downscaled high-resolution numerical model to replicate observed annual flow patterns within a riparian lowland. This downscaled numerical model was used to provide quantitative information regarding the riparian flow partitioning. To diversify the dataset, the riparian lowland was segmented to provide flow information at different scales, and topographic and hydraulic properties within the model were perturbed to capture the range of topographic and geological characteristics present at large scale. These data were then used to train a random forest (RF) model, where the target variable was the fraction of overland flow. Applying the RF model to a 12,785.5 km2 large region in Denmark provided a prediction in line with our understanding of the area. This approach can prove useful in enhancing existing nitrate management tools by incorporating variability in lowland nitrate reduction capacity.

Coupling effects of nitrate reduction and sulfur oxidation in a subtropical marine mangrove ecosystem with Spartina alterniflora invasion

The mangrove ecosystem has a high nitrate reduction capacity, which significantly alleviates severe nitrogen pollution. However, current research on nitrate reduction mechanisms in the mangrove ecosystem is limited. Furthermore, Spartina alterniflora invasion has disrupted the balance of the mangrove ecosystem and the effect of S. alterniflora on nitrate reduction has not yet been fully elucidated. Nitrate reduction was comprehensively investigated in a subtropical mangrove ecosystem in this study, which has been invaded by S. alterniflora for 40 years. Results showed that S. alterniflora significantly increased the relative and absolute abundance of nitrate reduction genes, especially nirS (nitrite reductase), in the mangrove ecosystem. Dissimilatory nitrate reduction to ammonium was the main pathway of nitrate reduction in the mangrove ecosystem. Nitrate reduction was mainly performed by Desulfobacterales and occurred in the shallow layers (0–10 cm) of mangrove sediments. A strong positive correlation was found between nitrate reduction and sulfur oxidation (especially sulfide oxidation), and the sulfide content was significantly positively correlated with the relative abundance of nitrate reduction genes. Moreover, 207 metagenomic assembled genomes (MAGs) were constructed, including 50 MAGs with high numbers (≥ 10) of nitrate reduction genes. This finding indicates that the dominant microbes had strong nitrate reduction potential in mangrove sediments. Our findings highlight the impact of S. alterniflora invasion on nitrate reduction in a subtropical marine mangrove ecosystem. This study provides new insights into our understanding of nitrogen pollution control and contributes to the exploration of new nitrogen-degrading microbes in mangrove ecosystems.

Fermentation quality, bacterial community, and predicted functional profiles in silage prepared with alfalfa, perennial ryegrass and their mixture in the karst region.

There is little information regarding the dynamics of fermentation products and the bacterial community in silage prepared with alfalfa (MS), perennial ryegrass (LP), and their mixture in the karst region. In this study, we explored the effects of combining MS with LP in different ratios (100% MS, 70% MS + 30% LP, 50% MS + 50% LP, 30% MS + 70% LP and 100% LP; fresh matter basis) on silage chemical composition, fermentation quality, bacterial communities and predicted functions during the ensiling process. Each treatment was prepared in triplicate and stored at room temperature (22-25°C) for 7, 15, and 45 days. The dry matter (DM) and water-soluble carbohydrate content of the silages increased as the LP proportion in the mixed silage increased; at 45 days, the 70% MS + 30% LP, 50% MS + 50% LP and 30% MS + 70% LP silages contained higher (p < 0.05) CP content than the 100% MS and 100% LP silages. The 30% MS + 70% LP and 100% LP silages exhibited lower (p < 0.05) pH and higher (p < 0.05) LA content than the other silages; at 45 days, none of the silages contained PA or BA. As fermentation proceeded, the abundance of harmful (Enterobacteriaceae and Sphingomonas) and beneficial (Lentilactobacillus, Lactiplantibacillus, Secundilactobacillus, and Levilactobacillus) microorganisms decreased and increased, respectively, as the LP proportion in the mixed silage increased. The predicted functional distribution of microbial communities and metabolic pathways revealed that the 30% MS + 70% LP and 100% LP silages had a stronger capacity for fermentation and a weaker capacity for nitrate reduction than the other silages. Moreover, as the fermentation proceeded, the 30% MS + 70% LP and 100% LP treatments enhanced the functions of "Metabolism," "Genetic information processing" and "Organismal systems" at level 1, the functions of "Amino acid metabolism" and "Nucleotide metabolism" at level 2, and the functions of "Metabolic pathways," "Biosynthesis of secondary metabolites," "Biosynthesis of antibiotics" and "Purine metabolism" at level 3. Thus, adding LP could improve the fermentation quality of MS silage by changing the composition and metabolic function of microbes; furthermore, ensiling 30% alfalfa with 70% ryegrass can produce high-quality silage in the karst region.

Denitrification in heterogeneous aquifers: Relevance of spatial variability and performance of homogenized parameters

Nitrate contamination of aquifers is threatening the sustainability of water resource production around the globe. Denitrification is an ubiquitous process in groundwater systems and needs to be represented in managerial and predictive efforts. Yet, fully understanding the temporal and spatial dynamics of all biogeochemical and physical properties controlling nitrate reduction at the basin scale remains a challenging task. Conceptual simplifications such as homogenization are used, but their implications on model performance are often not well assessed. This paper (1) analyzes the importance of denitrification spatial variability on the fate of non-point source nitrate contamination, and (2) assesses the performance of upscaled denitrification rate coefficient values. Heterogeneity in the hydraulic conductivity of a typical unconsolidated alluvial aquifer system and its associated uncertainty is systematically represented in our 3D numerical simulations of flow and transport. The spatial variability in the nitrate reduction capacities of the aquifer is accounted for by 3 different conceptual models: a positive and a negative correlation with the aquifer hydraulic properties and a uniform random distribution. Our results indicate that heterogeneity in the denitrification rate coefficient – as well as the model describing spatial variability – has a significant impact on concentration statistics observed at a series of extraction wells. However, we also show that, under the modeling setting used in this study (e.g., stationarity of reactivity), upscaled values of denitrification rate coefficients allow a virtually perfect reproduction of nitrate concentration statistics, a promising outcome for employing parameter estimation (calibration) of effective rate coefficients of denitrification: A detailed description of the spatial variability of the nitrate reduction capacity of the alluvial aquifer is not necessary. Yet, these homogeneous, upscaled denitrification rate coefficients result from a complex interaction between the biochemistry and the physics of the aquifer, which makes their direct estimation a challenging task.

Why is phloem sap nitrate kept low?

Since the first description of phloem sap composition nearly 60 years ago, it is generally assumed that phloem sap does not contain nitrate and that there is little or no backflow of nitrate from shoots to roots. While it is true that nitrate can occasionally be absent from phloem sap, there is now substantial evidence that phloem can carry nitrate and furthermore, transporters involved in nitrate redistribution to shoot sink organs and roots have been found. This raises the question of why nitrate may or may not be present in phloem sap, why its concentration is generally kept low, and whether plant shoot-root nutrient cycling also involves nitrate. We propose here that phloem sap nitrate is not only an essential component of plant nutritional signaling but also contributes to physical properties of phloem sap and as such, its concentration must be controlled to ensure proper coordination of plant development and nutrient transport. This article is protected by copyright. All rights reserved.

Description of Candidatus Mesopelagibacter carboxydoxydans and Candidatus Anoxipelagibacter denitrificans: Nitrate-reducing SAR11 genera that dominate mesopelagic and anoxic marine zones

The diverse and ubiquitous members of the SAR11 lineage (Alphaproteobacteria) represent up to 30–40% of the surface and mesopelagic oceanic microbial communities. However, the molecular and ecological mechanisms that differentiate closely related, yet distinct, SAR11 members that often co-occur under similar environmental conditions remain speculative. Recently, two mesopelagic and oxygen minimum zone (OMZ)-associated subclades of SAR11 (Ic and IIa.A) were described using single-cell amplified genomes (SAGs) linked to nitrate reduction in OMZs. In this current study, the collection of genomes belonging to these two subclades was expanded with thirteen new metagenome-assembled genomes (MAGs), thus providing a more detailed phylogenetic and functional characterization of these subclades. Gene content-based predictions of metabolic functions revealed similarities in central carbon metabolism between subclades Ic and IIa.A and surface SAR11 clades, with small variations in central pathways. These variations included more versatile sulfur assimilation pathways, as well as a previously predicted capacity for nitrate reduction that conferred unique versatility on mesopelagic-adapted clades compared to their surface counterparts. Finally, consistent with previously reported abundances of carbon monoxide (CO) in surface and mesopelagic waters, subclades Ia (surface) and Ic (mesopelagic) have the genetic potential to oxidize carbon monoxide (CO), presumably taking advantage of this abundant compound as an electron donor. Based on genomic analyses, environmental distribution and metabolic reconstruction, we propose two new SAR11 genera, Ca. Mesopelagibacter carboxydoxydans (subclade Ic) and Ca. Anoxipelagibacter denitrificans (subclade IIa.A), which represent members of the mesopelagic and OMZ-adapted SAR11 clades.

Nitrate reduction capacity is limited by belowground plant recovery in a 32‐year‐old created salt marsh

Human activities have decreased global salt marsh surface area with a subsequent loss in the ecosystem functions they provide. The creation of marshes in terrestrial systems has been used to mitigate this loss in marsh cover. Although these constructed marshes may rapidly recover ecosystem structure, biogeochemical processes may be slow to recover. We compared denitrification and dissimilatory nitrate reduction to ammonium (DNRA) rates between a 32‐year‐old excavation‐created salt marsh (CON‐2) and a nearby natural reference salt marsh (NAT) to assess the recovery of ecosystem function. These process rates were measured at 5 cm increments to a depth of 25 cm to assess how plant rooting depth and organic matter accumulation impact N‐cycling. We found that, for both marshes, denitrification and DNRA declined with depth with the highest rates occurring in the top 10 cm. In both systems, N‐retention by DNRA accounted for upwards of 75% of nitrate reduction, but denitrification and DNRA rates were nearly 2× and 3× higher in NAT than CON‐2, respectively. Organic matter was 6× lower in CON‐2, likely due to limited plant belowground biomass production. However, there was no response to glucose additions, suggesting that the microbial functional community, not substrate limitation, limited nitrate reduction recovery. Response ratios showed that denitrification in CON‐2 recovered in surficial sediments where belowground biomass was highest, even though biomass recovery was minimal. This indicates that although recovery of ecosystem function was constrained, it occurred on a faster trajectory than that of ecosystem structure.

Isolation and Characterization of Nitrate-Reducing Bacteria as Potential Probiotics for Oral and Systemic Health.

Recent evidence indicates that the reduction of salivary nitrate by oral bacteria can contribute to prevent oral diseases, as well as increase systemic nitric oxide levels that can improve conditions such as hypertension and diabetes. The objective of the current manuscript was to isolate nitrate-reducing bacteria from the oral cavity of healthy donors and test their in vitro probiotic potential to increase the nitrate-reduction capacity (NRC) of oral communities. Sixty-two isolates were obtained from five different donors of which 53 were confirmed to be nitrate-reducers. Ten isolates were selected based on high NRC as well as high growth rates and low acidogenicity, all being Rothia species. The genomes of these ten isolates confirmed the presence of nitrate- and nitrite reductase genes, as well as lactate utilization genes, and the absence of antimicrobial resistance, mobile genetic elements and virulence genes. The pH at which most nitrate was reduced differed between strains. However, acidic pH 6 always stimulated the reduction of nitrite compared to neutral pH 7 or slightly alkaline pH 7.5 (p < 0.01). We tested the effect of six out of 10 isolates on in vitro oral biofilm development in the presence or absence of 6.5 mM nitrate. The integration of the isolates into in vitro communities was confirmed by Illumina sequencing. The NRC of the bacterial communities increased when adding the isolates compared to controls without isolates (p < 0.05). When adding nitrate (prebiotic treatment) or isolates in combination with nitrate (symbiotic treatment), a smaller decrease in pH derived from sugar metabolism was observed (p < 0.05), which for some symbiotic combinations appeared to be due to lactate consumption. Interestingly, there was a strong correlation between the NRC of oral communities and ammonia production even in the absence of nitrate (R = 0.814, p < 0.01), which indicates that bacteria involved in these processes are related. As observed in our study, individuals differ in their NRC. Thus, some may have direct benefits from nitrate as a prebiotic as their microbiota naturally reduces significant amounts, while others may benefit more from a symbiotic combination (nitrate + nitrate-reducing probiotic). Future clinical studies should test the effects of these treatments on oral and systemic health.

Spatial Distribution of Integrated Nitrate Reduction across the Unsaturated Zone and the Groundwater Body in Germany

Nitrate pollution in groundwater and its mitigation strategies is currently a topic of controversial debate in Germany, and the demand for harmonised approaches for the implementation of regulations is increasing. Important factors that need to be considered when planning mitigation measures are the nitrogen inputs into water bodies and the natural nitrate reduction capacity. The present study introduces a nationwide, harmonised and simplified approach for estimating nitrate reduction as an integral quantity across the unsaturated zone and the groundwater body. The nitrate reduction rates vary from 0% to 100%, and are on average 57%, with high values in the north of Germany and low values in the south. Hydrogeological characteristics are associated with the estimated nitrate reduction rates, whereby the influence of aquifer type and redox conditions are particularly relevant. The nitrate reduction rates are substantially higher in porous aquifers and under anaerobic conditions than in fractured, consolidated aquifers and under aerobic conditions. This contribution presents a harmonised conceptual approach to derive the nitrate reduction rate at a 1 km × 1 km resolution. This information can be used when planning and designing mitigation measures to meet the groundwater nitrate limits.

Efficient recovery of Cu(II) by LTA-zeolites with hierarchical pores and their resource utilization in electrochemical denitrification: Environmentally friendly design and reutilization of waste in water

Water pollution seriously endangers human health and the environment. Here we prepared and tested mesoporous LTA zeolites for the adsorption of Cu(II) from aqueous media and the captured copper was further used for electrochemical nitrate reduction. The prepared hierarchically porous LTA exhibited a high capacity (341.5 mg g−1) for Cu(II) adsorption, following the pseudo-second-order kinetic and Freundlich adsorption isotherm models well. The Cu-LTA sample was characterised by various analytical methods, and Cu(I) species were identified as the active sites for nitrate electrochemical reduction. Based on the spectral characterization and reducibility, strong metal-support interaction was found between copper and LTA, which is beneficial to the dispersion of active sites and their contacts with nitrates. In total, 10.1 g-N-NO3 g−1-Cu was reduced over the Cu-LTA-modified cathode in a three-electrode system with high N2 selectivity (92.1 %). Compared to purely microporous zeolites, mesoporous LTA has a higher capacity for Cu(II) removal and nitrate reduction. The mesoporous structure allows easy access to the inner active sites with low diffusion resistance. The low Tafel slope and high current density confirm the high activity of the mesoporous Cu-LTA, making it a promising and efficient material for the removal and reuse of heavy metal ions.

Growth ability and denitrification activity of bacterial isolates on media containing propoxur

Denitrifying bacteria are expected to be a promising organism to degrade pesticides by using them as carbon and nitrogen substrate. The potential of denitrifying bacterial isolates namely TK Bali, KT, UHT, L7T4, and C.pkr in degrading propoxur was studied through growth ability test and denitrification activity on three types of media containing propoxur. The media were NB (Nutrient Broth), MS (Mineral Salt), and MS + glucose added with various concentrations of propoxur (500, 1000, 1500 ppm). Bacterial growth was analyzed by measuring turbidity (OD) at a wavelength of 436 nm. Denitrification activity was measured by nitrate reduction capacity. Concentration of propoxur and isopropoxyphenol were measured using HPLC. The results showed that the highest growth and denitrification activities were in NB media. Denitrifying bacteria can grow in NB media containing propoxur up to 1500 ppm concentration, but the growth and denitrification activities decreased with the increasing concentration of propoxur. The denitrifying bacteria isolates seemed not to be able to use propoxur as the sole source of carbon and nitrogen. Denitrifying bacteria were resistant to propoxur to a certain concentration, but were unable to degrade propoxur, or it could degrade propoxur, but only in very low capacity. Isolate Brevundimonas diminuta, L7T4 was able to degrade propoxur to isopropoxyphenol in relatively low rate of degradation, less than 20 % of propoxur was degraded in 2 days of incubation.

Members of Marinobacter and Arcobacter Influence System Biogeochemistry During Early Production of Hydraulically Fractured Natural Gas Wells in the Appalachian Basin.

Hydraulic fracturing is the prevailing method for enhancing recovery of hydrocarbon resources from unconventional shale formations, yet little is understood regarding the microbial impact on biogeochemical cycling in natural-gas wells. Although the metabolisms of certain fermentative bacteria and methanogenic archaea that dominate in later produced fluids have been well studied, few details have been reported on microorganisms prevelant during the early flowback period, when oxygen and other surface-derived oxyanions and nutrients become depleted. Here, we report the isolation, genomic and phenotypic characterization of Marinobacter and Arcobacter bacterial species from natural-gas wells in the Utica-Point Pleasant and Marcellus Formations coupled to supporting geochemical and metagenomic analyses of produced fluid samples. These unconventional hydrocarbon system-derived Marinobacter sp. are capable of utilizing a diversity of organic carbon sources including aliphatic and aromatic hydrocarbons, amino acids, and carboxylic acids. Marinobacter and Arcobacter can metabolize organic nitrogen sources and have the capacity for denitrification and dissimilatory nitrate reduction to ammonia (DNRA) respectively; with DNRA and ammonification processes partially explaining high concentrations of ammonia measured in produced fluids. Arcobacter is capable of chemosynthetic sulfur oxidation, which could fuel metabolic processes for other heterotrophic, fermentative, or sulfate-reducing community members. Our analysis revealed mechanisms for growth of these taxa across a broad range of salinities (up to 15% salt), which explains their enrichment during early natural-gas production. These results demonstrate the prevalence of Marinobacter and Arcobacter during a key maturation phase of hydraulically fractured natural-gas wells, and highlight the significant role these genera play in biogeochemical cycling for this economically important energy system.

Hot Spots and Hot Moments of Nitrogen in a Riparian Corridor

AbstractWe use 3‐D high‐resolution reactive transport modeling to investigate whether the spatial distribution of organic‐carbon‐rich and chemically reduced sediments located in the riparian zone and temporal variability in groundwater flow direction impact the formation and distribution of nitrogen hot spots (regions that exhibit higher reaction rates when compared to other locations nearby) and hot moments (times that exhibit high reaction rates as compared to longer intervening time periods) within the Rifle floodplain in Colorado. Groundwater flows primarily toward the Colorado River from the floodplain but changes direction at times of high river stage. The result is that oxic river water infiltrates the Rifle floodplain during these relatively short‐term events. Simulation results indicate that episodic rainfall in the summer season leads to the formation of nitrogen hot moments associated with Colorado River rise and resulting river infiltration into the floodplain. The results further demonstrate that the naturally reduced zones (NRZs) present in sediments of the Rifle floodplain have a higher potential for nitrate removal, approximately 70% greater than non‐NRZs for typical hydrological conditions. During river water infiltration, nitrate reduction capacity remains the same within the NRZs, however, these conditions impact non‐NRZs to a greater extent (approximately 95% less nitrate removal). Model simulations indicate chemolithoautotrophs are primarily responsible for the removal of nitrate in the Rifle floodplain. These nitrogen hot spots and hot moments are sustained by microbial respiration and the chemolithoautotrophic oxidation of reduced minerals in the riparian zone.