Burkholderia Unamae Research Articles

Improving the Sustainability of Rice Cultivation in Central Thailand with Biofertilizers and Laser Land Leveling

Rice production in the Central Plains of Thailand plays a key role in the country’s food security. However, the overuse of inputs coupled with the rising production costs are making it increasingly difficult for smallholder rice farming to remain economically and environmentally sustainable. Replicated production-scale field trials of Cost Reduction Operating Principles (CROP)—Thailand’s national package of best management practices for rice production—were established in tandem with laser land leveling (LLL), mechanical drum seeder, and the application of two biofertilizer products (i.e., PGPR II, that contains Azospirillum brasilense Sp. TS29 and Burkholderia vietnamiensis S45; and LDD #12, that contains Azotobacter tropicalis, Burkholderia unamae and Bacillus subtilis) and compared with farmer’s practices (FP). Performance indicators (PI) promoted by the Sustainable Rice Platform (SRP) were used to assess economic and environmental indicators. CROP + PGPR had significantly higher net income (79%) and nitrogen-use efficiency (57%) compared with FP. Pesticide use (28%), seed (60%), inorganic fertilizer N (41%) and total production costs (19%) were reduced in all CROP treatments compared with FP. These results demonstrate that the application of CROP, LLL, mechanical drum seeder, and biofertilizers can substantially improve the economic and environmental sustainability of rice production in the Central Plains of Thailand.

Role of phosphate solubilizing Burkholderia spp. for successful colonization and growth promotion of Lycopodium cernuum L. (Lycopodiaceae) in lateritic belt of Birbhum district of West Bengal, India

Profuse growth of Lycpodium cernuum L. was found in phosphate deficient red lateritic soil of West Bengal, India. Interaction of vesicular–arbuscular mycorrhiza (VAM) with Lycopodium rhizoids were described earlier but association of PGPR with their rhizoids were not studied. Three potent phosphate solubilizing bacterial strains (P4, P9 and P10) associated with L. cernuum rhizoids were isolated and identified by 16S rDNA homologies on Ez-Taxon database as Burkholderia tropica, Burkholderia unamae and Burkholderia cepacia respectively. Day wise kinetics of phosphate solubilization against Ca3(PO4)2 suggested P4 (580.56±13.38μgml−1) as maximum mineral phosphate solubilizer followed by P9 (517.12±17.15μgml−1) and P10 (485.18±14.23μgml−1) at 28°C. Release of bound phosphates by isolated strains from ferric phosphate (FePO4), aluminum phosphate (AlPO4) and four different complex rock phosphates indicated their very good phosphate solubilizng efficacy. Nitrogen independent solubilizition also supports their nitrogen fixing capabilities. Inhibition of P solubilization by calcium salts and induction by EDTA suggested pH dependent chelation of metal cations by all of the isolates. Rhizoidal colonization potentials of Burkholderia spp. were confirmed by in planta experiment and also using scanning electron microscope (SEM). Increases of total phosphate content in Lycopodium plants upon soil treatment with these isolates were also recorded. In addition siderophore production on CAS agar medium, tryptophan dependent IAA production and antifungal activities against pathogenic fungi by rhizospheric isolates deep-rooted that they have definite role in nutrient mobilization for successful colonization of L. cernuum in nutrient deficient lateritic soil.

Induction of biofilm formation in the betaproteobacterium Burkholderia unamae CK43B exposed to exogenous indole and gallic acid.

Burkholderia unamae CK43B, a member of the Betaproteobacteria that was isolated from the rhizosphere of a Shorea balangeran sapling in a tropical peat swamp forest, produces neither indole nor extracellular polymeric substances associated with biofilm formation. When cultured in a modified Winogradsky's medium supplemented with up to 1.7 mM indole, B. unamae CK43B maintains its planktonic state by cell swelling and effectively degrades exogenous indole. However, in medium supplemented with 1.7 mM exogenous indole and 1.0 mM gallic acid, B. unamae CK43B produced extracellular polymeric substances and formed a biofilm. The concentration indicated above of gallic acid alone had no effect on either the growth or the differentiation of B. unamae CK43B cells above a certain concentration threshold, whereas it inhibited indole degradation by B. unamae CK43B to 3-hydroxyindoxyl. In addition, coculture of B. unamae CK43B with indole-producing Escherichia coli in nutrient-rich Luria-Bertani medium supplemented with 1.0 mM gallic acid led to the formation of mixed cell aggregates. The viability and active growth of B. unamae CK43B cells in a coculture system with Escherichia coli were evidenced by fluorescence in situ hybridization. Our data thus suggest that indole facilitates intergenus communication between indole-producing gammaproteobacteria and some indole-degrading bacteria, particularly in gallic acid-rich environments.

Burkholderia humi sp. nov., Isolated from Peat Soil

A Gram-negative, aerobic, short-rod-shaped, non-motile bacterium designated Rs7(T), was isolated from peat soil collected from Russia and was characterized to determine its taxonomic position. 16S rRNA gene sequence analysis revealed that the strain Rs7(T) belongs to the class Betaproteobacteria. The highest degree of sequence similarities were determined to be with Burkholderia tropica Ppe8(T) (98.4 %), Burkholderia unamae MTI-641(T) (97.8 %), Burkholderia bannensis E25(T) (97.7 %), Burkholderia heleia SA41(T) (97.0 %), and Burkholderia sacchari IPT101(T) (97.0 %). Chemotaxonomic data revealed that the strain Rs7(T) possesses ubiquinone Q-8. The polar lipid profile of strain Rs7(T) contained phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylglycerol, and an unknown amino phospholipid. The predominant fatty acids were C(16:0), C(19:0) cyclo ω8c, and C(17:0) cyclo, all of which corroborated the assignment of the strain to the genus Burkholderia. The DNA G+C content was 63.2 mol%. DNA-DNA hybridization experiments showed less than 37.8 % DNA relatedness with closely related type strains, thus confirming separate species status. The results of physiological and biochemical tests allowed phenotypic differentiation of strain Rs7(T) from the members of the genus Burkholderia. Based on these data, Rs7(T) (=KEMC 7302-068(T) = JCM 18069(T)) should be classified as the type strain for a novel Burkholderia species, for which the name Burkholderia humi sp. nov. is proposed.

Identification of Plant Growth-Promoting Bacteria Using Titanium Dioxide Photocatalysis-Assisted Photoacoustic Technique

The effect of titanium dioxide photocatalysis against bacteria that are dangerous for human health has been investigated in the past, suggesting the possibility of using a specific behavior for each microorganism during this process for its discrimination. In this study, the behavior of some plants’ growth promoting bacteria (Burkholderia unamae (Strain MTI 641), Acetobacter diazotrophicus (Strain PAl 5T), A. diazotrophicus (Strain CFN-Cf 52), and B. unamae (Strain TATl-371)) interacting with light and bactericidal titanium dioxide films have been analyzed using the photoacoustic technique. The monitoring of these interactions shows particular characteristics that could serve for identifying these species.

Low diversity diazotrophic of culturable Burkholderia species associated with sorghum

Sorghum is an important crop around the World. Burkholderia genus has emerged as an important plant associated bacteria in the last years. However, it is important to understand these processes and how they took place in the environment. In this study, we evaluated the occurrence of Burkholderia species associated with five varieties of sorghum cultivated in different places of Mexico. Burkholderia species were isolated using a selective medium for diazotrophic species and identified using a semi-selective set of primers and clustered by restriction analysis of 16S rRNA sequence. It was found a low geographical distribution of species Burkholderia tropica and Burkholderia vietnamiensis. Due to the low diversity of diazotrophic Burkholderia found, colonization and competition assays were performed in the rhizosphere of sorghum plants. By colonization assays we inoculated populations of 1 × 08 cfu/ml of B. tropica, Burkholderia unamae, Burkholderiasilvatantlica and Burkholderia xenovorans. We showed that all strains could colonize the rhizosphere. In competition assays, B. unamae and B. tropica did not show any antagonistic effect among them, but we showed that both species colonized the rhizosphere with the same number of bacteria in sorghum plants. The present study confirms the low geographic distribution of diazotrophic B. tropica and B. vietnamiensisassociated with sorghum field-grown in Mexico. Key words: β-rhizobia, Burkholderia, sorghum, nitrogen fixation.

Burkholderia ferrariae sp. nov., isolated from an iron ore in Brazil

A Gram-negative, non-spore-forming bacterial strain with the ability to solubilize highly insoluble phosphatic minerals was isolated from a high-phosphorous iron ore from Minas Gerais State, Brazil. This strain, designated FeGl01(T), was subjected to a polyphasic taxonomic investigation. Comparative 16S rRNA gene sequence analysis indicated that it formed a distinct phylogenetic lineage within the genus Burkholderia together with several other species of the genus, e.g. Burkholderia sacchari, Burkholderia tropica and Burkholderia unamae. Partial nucleotide sequencing and analysis of the recA gene roughly corroborated the phylogenetic position of strain FeGl01(T) within the genus Burkholderia. The chemotaxonomic properties of strain FeGl01(T), such as ubiquinone Q-8 as the predominant quinone system and C(16 : 0), C(17 : 0) cyclo, C(18 : 1)omega7c and C(19 : 0)omega8c cyclo as the major fatty acids, were also consistent with its classification within the genus Burkholderia. DNA-DNA hybridization experiments between strain FeGl01(T) and the type strains of B. unamae, B. sacchari and B. tropica yielded reassociation values of 40 % or lower, which, together with qualitative and quantitative differences in fatty acid composition and with differences in several phenotypic traits, support the separation of the new isolate from the phylogenetically most closely related species. Therefore, it is suggested that strain FeGl01(T) represents a novel species of the genus Burkholderia, for which the name Burkholderia ferrariae sp. nov. is proposed. The type strain is FeGl01(T) (=LMG 23612(T)=CECT 7171(T)=DSM 18251(T)).