A time-resolved structural understanding of protein function, including the intermediate conformations proteins adopt during catalysis would have far reaching implications: for example, better informing structure-based drug design and attempts to rationally design novel enzymes with newly engineered functions. Our aim is to increase the routinely achievable time-resolution at which we can probe biochemical processes, such as enzyme catalysis. We perform atomistic simulation starting from X-ray structures of proteins in their crystalline environment and calculate diffraction patterns. We then impose changes to the system, such as the breakage of disulphide bonds and select Bragg reflections whose intensity profiles are diagnostic of the structural changes. This approach provides the means by which a set of experimental reflection intensity profiles could be tested against potential mechanistic hypotheses taken from simulation.
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