Resistance Genes Bph14 Research Articles

The effect of gamma ray re-irradiation on genetic variations in black rice based on RAPD and Bph gene resistance location based on SSR markers

Abstract The black rice variety Cempo Ireng M8 generation already has morphologically uniform characteristics and good productivity values. However, the black rice M8 generation is still susceptible to planthopper pests. Therefore, a re-irradiation process was carried out on M8 using 200 Gy gamma rays to obtain a black rice variety resistant to planthopper pests. This re-radiation treatment has produced the M2 generation. To determine the genetic variations between M8 black rice plants and the M2 generation that are formed, this research conducted molecular methods using six RAPD markers and three SSR markers to determine genes in the sample related to the Bph resistance gene. The sequenced SSR amplicons were analyzed using BLAST in NCBI. The results of the RAPD marker showed genetic variation in the seven black rice samples with an average polymorphism percentage of 92.85% and the Polymorphic Information Content (PIC) value for the six primers was between 0.25-0.5, which means the RAPD primers is informative. The analysis and sequence results of the RM5953 primer show that the primer is located in the Bph resistance gene (chromosome 4) and produces an amplicon at a band size of 129 bp.

Fine mapping and breeding application of two brown planthopper resistance genes derived from landrace rice.

The Brown planthopper (Nilaparvata lugens Stål; BPH) is known to cause significant damage to rice crops in Asia, and the use of host-resistant varieties is an effective and environmentally friendly approach for controlling BPH. However, genes limited resistance genes that are used in insect-resistant rice breeding programs, and landrace rice varieties are materials resources that carry rich and versatile genes for BPH resistance. Two landrace indica rice accessions, CL45 and CL48, are highly resistant to BPH and show obvious antibiosis against BPH. A novel resistance locus linked to markers 12M16.983 and 12M19.042 was identified, mapped to chromosome 12 in CL45, and designated Bph46. It was finely mapped to an interval of 480 kb and Gene 3 may be the resistance gene. Another resistance locus linked to markers RM26567 and 11MA104 was identified and mapped to chromosome 11 in CL48 and designated qBph11.3 according to the nominating rule. It was finely mapped to an interval of 145 kb, and LOC_Os11g29090 and LOC_Os11g29110 may be the resistance genes. Moreover, two markers, 12M16.983 and 11MA104, were developed for CL45 and CL48, respectively, using marker-assisted selection (MAS) and were confirmed by backcrossing individuals and phenotypic detection. Interestingly, we found that the black glume color is closely linked to the BPH resistance gene in CL48 and can effectively assist in the identification of positive individuals for breeding. Finally, several near-isogenic lines with a 9311 or KW genetic background, as well as pyramid lines with two resistance parents, were developed using MAS and exhibited significantly high resistance against BPHs.

Genome-wide association study and genomic prediction for resistance to brown planthopper in rice.

The brown planthopper (BPH) is the most destructive insect pest that threatens rice production globally. Developing rice varieties incorporating BPH-resistant genes has proven to be an effective control measure against BPH. In this study, we assessed the resistance of a core collection consisting of 502 rice germplasms by evaluating resistance scores, weight gain rates and honeydew excretions. A total of 117 rice varieties (23.31%) exhibited resistance to BPH. Genome-wide association studies (GWAS) were performed on both the entire panel of 502 rice varieties and its subspecies, and 6 loci were significantly associated with resistance scores (P value < 1.0e-8). Within these loci, we identified eight candidate genes encoding receptor-like protein kinase (RLK), nucleotide-binding and leucine-rich repeat (NB-LRR), or LRR proteins. Two loci had not been detected in previous study and were entirely novel. Furthermore, we evaluated the predictive ability of genomic selection for resistance to BPH. The results revealed that the highest prediction accuracy for BPH resistance reached 0.633. As expected, the prediction accuracy increased progressively with an increasing number of SNPs, and a total of 6.7K SNPs displayed comparable accuracy to 268K SNPs. Among various statistical models tested, the random forest model exhibited superior predictive accuracy. Moreover, increasing the size of training population improved prediction accuracy; however, there was no significant difference in prediction accuracy between a training population size of 737 and 1179. Additionally, when there existed close genetic relatedness between the training and validation populations, higher prediction accuracies were observed compared to scenarios when they were genetically distant. These findings provide valuable resistance candidate genes and germplasm resources and are crucial for the application of genomic selection for breeding durable BPH-resistant rice varieties.

Pyramiding BPH genes in rice maintains resistance against the brown planthopper under climate change.

Nilaparvata lugens (brown planthopper; BPH) is a significant rice pest in Asia, causing substantial yield losses. Pyramiding BPH resistance genes with diverse resistance traits into rice cultivars is an effective strategy for pest management. However, the response of pyramiding combinations to environmental changes remains unclear. To address this knowledge gap, we investigated three pyramiding rice lines (BPH2 + 32, BPH9 + 32, and BPH18 + 32) in the context of varying climate change conditions, ensuring sufficient N. lugens-rice interactions. Thus, we set three environmental conditions [30/25 °C (day/night) with 500 ppm CO2 concentration, 32/27 °C (day/night) with 600 ppm CO2 concentration, and 35/30 °C (day/night) with 1000 ppm CO2 concentration]. All three pyramiding rice lines maintained the insect resistant ability under the three environmental settings. In particular, the BPH18 + 32 rice line exhibited stronger antibiotic and antixenosis effects against N. lugens. In addition, BPH18 + 32 rice line had better shoot resilience under N. lugens infestation, whereas the performance of the other two selected pyramiding rice lines varied. Thus, although BPH2, BPH9, and BPH18 represent three alleles at the same locus, their resistance levels against N. lugens may vary under distinct climate change scenarios, as evidenced by the performance of N. lugens on the three pyramiding rice lines. Our findings indicate that all three tested pyramiding rice lines maintained their insect resistance in the face of diverse climate change scenarios. However, these lines exhibited varied repellent responses and resilience capacities in response to climate change. Thus, the combination of pyramiding genes needs to be considered for future breeding programs. © 2023 Society of Chemical Industry.

Identification of Major Brown Planthopper Resistance Genes in Indigenous Thai Upland Rice Germplasm Using Molecular Markers

Brown planthopper (BPH) is the most problematic insect in rice cultivation, as it decreases crop yields. In this study, 143 upland rice varieties were genotyped for five essential Bph resistance genes: bph2, Bph3, Bph14, Bph15, and Bph17. The gene frequencies of the five Bph resistance genes varied from 33.57% to 61.54%. The 139 varieties contained one to five Bph resistance genes. Polymorphism information content values ranged from 0.4460 to 0.4984 with an average of 0.4744. Cluster analysis supported the subpopulations identified by STRUCTURE. An analysis of molecular variance analysis identified 7% variance among and 92% variance within subpopulations, indicating a significant gene exchange between the two subpopulations. The evaluation of BPH resistance using the SEM system by IRRI showed that 2 varieties were resistant to BPH, 29 varieties were moderately resistant, and 112 varieties were susceptible. The Bph3, Bph14, and Bph15 genes and BPH resistance showed significant correlation. These findings provide important information regarding BPH-resistant varieties for future use in rice breeding programs.

Transcriptome analysis revealed differentially expressed genes in rice functionally associated with brown planthopper defense in near isogenic lines pyramiding BPH14 and BPH15.

Although rice has many pests, brown planthopper (BPH) in particular is known to cause substantial damage. The pyramiding application of BPH-resistance genes BPH14 and BPH15 has proven effective in enhancing rice defense against BPH. However, the molecular mechanisms underlying BPH14/BPH15-conferred resistance remain unexplained. In this investigation, we analyzed the transcriptomes of near isogenic lines (NILs) containing either BPH14 (B14), BPH15 (B15), or BPH14/BPH15 (B1415), as well as their recurrent parent (RP) 'Wushansimiao'. In total, we detected 14,492 differentially expressed genes (DEGs) across 12 mRNA profiles of resistant NILs and RP at different feeding stages. In the transcriptomic analysis, 531 DEGs appeared to be common among the resistant NILs compared to RP before and after BPH feeding. These common DEGs were enriched in defense response, phosphorylation, and salt stress response. In addition, 258 DEGs shared only in resistant NILs were obtained among the different feeding stages, which were enriched in oxidative stress response, karrikin response, and chloroplast organization. Considering the expression patterns and relevant research reports associated with these DEGs, 21 were chosen as BPH resistance candidates. In rice protoplasts, the candidate DEG OsPOX8.1 was confirmed to increase reactive oxygen species (ROS) accumulation by chemiluminescence measurement. Our results provide valuable information to further explore the defense mechanism of insect-resistant gene pyramiding lines and develop robust strategies for insect control.

Recent Advances in Molecular Mechanism and Breeding Utilization of Brown Planthopper Resistance Genes in Rice: An Integrated Review.

Over half of the world's population relies on rice as their staple food. The brown planthopper (Nilaparvata lugens Stål, BPH) is a significant insect pest that leads to global reductions in rice yields. Breeding rice varieties that are resistant to BPH has been acknowledged as the most cost-effective and efficient strategy to mitigate BPH infestation. Consequently, the exploration of BPH-resistant genes in rice and the development of resistant rice varieties have become focal points of interest and research for breeders. In this review, we summarized the latest advancements in the localization, cloning, molecular mechanisms, and breeding of BPH-resistant rice. Currently, a total of 70 BPH-resistant gene loci have been identified in rice, 64 out of 70 genes/QTLs were mapped on chromosomes 1, 2, 3, 4, 6, 8, 10, 11, and 12, respectively, with 17 of them successfully cloned. These genes primarily encode five types of proteins: lectin receptor kinase (LecRK), coiled-coil-nucleotide-binding-leucine-rich repeat (CC-NB-LRR), B3-DNA binding domain, leucine-rich repeat domain (LRD), and short consensus repeat (SCR). Through mediating plant hormone signaling, calcium ion signaling, protein kinase cascade activation of cell proliferation, transcription factors, and miRNA signaling pathways, these genes induce the deposition of callose and cell wall thickening in rice tissues, ultimately leading to the inhibition of BPH feeding and the formation of resistance mechanisms against BPH damage. Furthermore, we discussed the applications of these resistance genes in the genetic improvement and breeding of rice. Functional studies of these insect-resistant genes and the elucidation of their network mechanisms establish a strong theoretical foundation for investigating the interaction between rice and BPH. Furthermore, they provide ample genetic resources and technical support for achieving sustainable BPH control and developing innovative insect resistance strategies.

Integrated transcriptomics and metabolomics analysis provide insight into the resistance response of rice against brown planthopper.

The brown planthopper (Nilaparvata lugens Stål, BPH) is one of the most economically significant pests of rice. The Bph30 gene has been successfully cloned and conferred rice with broad-spectrum resistance to BPH. However, the molecular mechanisms by which Bph30 enhances resistance to BPH remain poorly understood. Here, we conducted a transcriptomic and metabolomic analysis of Bph30-transgenic (BPH30T) and BPH-susceptible Nipponbare plants to elucidate the response of Bph30 to BPH infestation. Transcriptomic analyses revealed that the pathway of plant hormone signal transduction enriched exclusively in Nipponbare, and the greatest number of differentially expressed genes (DEGs) were involved in indole 3-acetic acid (IAA) signal transduction. Analysis of differentially accumulated metabolites (DAMs) revealed that DAMs involved in the amino acids and derivatives category were down-regulated in BPH30T plants following BPH feeding, and the great majority of DAMs in flavonoids category displayed the trend of increasing in BPH30T plants; the opposite pattern was observed in Nipponbare plants. Combined transcriptomics and metabolomics analysis revealed that the pathways of amino acids biosynthesis, plant hormone signal transduction, phenylpropanoid biosynthesis and flavonoid biosynthesis were enriched. The content of IAA significantly decreased in BPH30T plants following BPH feeding, and the content of IAA remained unchanged in Nipponbare. The exogenous application of IAA weakened the BPH resistance conferred by Bph30. Our results indicated that Bph30 might coordinate the movement of primary and secondary metabolites and hormones in plants via the shikimate pathway to enhance the resistance of rice to BPH. Our results have important reference significance for the resistance mechanisms analysis and the efficient utilization of major BPH-resistance genes.

Cloning of the promoter of rice brown planthopper feeding-inducible gene OsTPS31 and identification of related cis-regulatory elements.

Brown planthopper (BPH; Nilaparvata lugens) is one of the most serious pests of rice in the world. Insect-resistant genetic engineering is a very effective technology to control BPH. The promoters and cis-regulatory elements inducible by plant-feeding insects are critical for genetic engineering of insect-resistant crops. In this study, we cloned a promoter Ptps31 and a 7bp cis-regulatory sequence that up-regulated downstream genes induced by BPH feeding. The promoter of OsTPS31 (Ptps31) unresponsive to physical damage but responsive to BPH feeding was cloned and functionally verified. The results showed that expression of the OsBPH14 gene driven by the promoter region from -510 to -246 bp in rice could significantly improve the resistance to BPH. The promoter region from -376 to -370 bp (TAGTGTC) was identified as a cis-regulatory sequence related to BPH feeding induction of downstream gene expression. The findings provide a new promoter and a new cis-regulatory sequence tool for the research on and application of rice BPH resistance genes, as well as a new perspective for functional analysis of the OsTPS31 gene. © 2023 Society of Chemical Industry.

Functional Bph14 from Rathu Heenati promotes resistance to BPH at the early seedling stage of rice (Oryza sativa L.) as revealed by QTL-seq.

A QTL associated with BPH resistance at the early seedling stage was identified on chromosome 3. Functional Bph14 in Rathu Heenati was associated with BPH resistance at the early seedling stage. Brown planthopper (BPH; Nilaparvata lugens Stål) is considered the most important rice pest in many Asian countries. Several BPH resistance genes have previously been identified. However, there are few reports of genes specific for BPH resistance at the early seedling stage, a crucial stage for direct-seeding cultivation. In this study, we performed a QTL-seq analysis using two bulks (20 F2 lines in each bulk) of the F2 population (n = 300) derived from a cross of Rathu Heenati (RH) × HCS-1 to identify QTL/genes associated with BPH resistance at the early seedling stage. An important QTL was identified on chromosome 3 and Bph14 was identified as a potential candidate gene based on the differences in gene expression and sequence variation when compared with the two parents. All plants in the resistant bulks possessed the functional Bph14 from RH and all plants in the susceptible bulk and HCS-1 contained a large deletion (2703bp) in Bph14. The functional Bph14 gene of RH appears to be important for BPH resistance at the early seedling stage of rice and could be used in conjunction with other BPH resistance genes in rice breeding programs that confer resistance to BPH at the early and later growth stages.

Development of pyramided lines carrying brown planthopper resistance genes in the genetic background of Indica Group rice (Oryza sativa L.) variety 'IR64'.

The development of resistant rice (Oryza sativa L.) varieties is a key strategy for the eco-friendly control of brown planthopper (BPH: Nilaparvata lugens Stål). However, BPH outbreaks occur frequently owing to the evolution of virulent strains in the field and the rapid breakdown of monogenic resistance to BPH. Therefore, to enhance BPH resistance and gauge the effectiveness of gene pyramiding against strongly virulent BPH, we developed pyramided lines (PYLs) in the genetic background of 'IR64' carrying BPH resistance genes. We developed six IR64-PYLs (BPH3 + BPH17, BPH32 + BPH17, BPH32 + BPH20, BPH3 + BPH17-ptb, BPH20 + BPH3, and BPH17-ptb + BPH32) through marker-assisted selection. To assess the resistance of the IR64-PYLs, we conducted antibiosis test, honeydew test, and modified seedbox screening test (MSST) using strongly virulent BPH populations. The level of BPH resistance increased in all six IR64-PYLs compared to both 'IR64' and the corresponding NILs in MSST. Among them, IR64-BPH3 + BPH17 and IR64-BPH32 + BPH17 exhibited the highest resistance to BPH. However, the resistance level of most IR64-PYLs was not significantly higher than that of the corresponding NILs in antibiosis test. Thus, these PYLs could serve as a valuable resource for breeding programs aimed at improving resistance to virulent strains of BPH and enhancing their durability.

Effect of nitrogen fertilizer on the resistance of rice near-isogenic lines with BPH resistance genes

BackgroundNitrogen is an essential macronutrient for plant growth and development. Crops with a high nitrogen input usually have high yields. However, outbreaks of brown planthoppers (Nilaparvata lugens; BPH) frequently occur on rice farms with excessive nitrogen inputs. Rice plants carrying BPH resistance genes are used for integrated pest management. Thus, the impact of nitrogen on the resistance of rice near-isogenic lines (NILs) with BPH resistance genes was investigated.ResultsWe tested these NILs using a standard seedbox screening test and a modified bulk seedling test under different nitrogen treatments. The amount of nitrogen applied had an impact on the resistance of some lines with BPH resistance genes. In addition, three NILs (NIL-BPH9, NIL-BPH17, and NIL-BPH32) were further examined for antibiosis and antixenosis under varying nitrogen regimes. The N. lugens nymph population growth rate, honeydew excretion, female fecundity, and nymph survival rate on the three NILs were not affected by different nitrogen treatments except the nymph survival rate on NIL-BPH9 and the nymph population growth rate on NIL-BPH17. Furthermore, in the settlement preference test, the preference of N. lugens nymphs for IR24 over NIL-BPH9 or NIL-BPH17 increased under the high-nitrogen regime, whereas the preference of N. lugens nymphs for IR24 over NIL-BPH32 was not affected by the nitrogen treatments.ConclusionsOur results indicated that the resistance of three tested NILs did not respond to different nitrogen regimes and that NIL-BPH17 exerted the most substantial inhibitory effect on N. lugens growth and development.

Plant elicitor peptide signalling confers rice resistance to piercing-sucking insect herbivores and pathogens.

SummaryRice is a staple food crop worldwide, and its production is severely threatened by phloem‐feeding insect herbivores, particularly the brown planthopper (BPH, Nilaparvata lugens), and destructive pathogens. Despite the identification of many BPH resistance genes, the molecular basis of rice resistance to BPH remains largely unclear. Here, we report that the plant elicitor peptide (Pep) signalling confers rice resistance to BPH. Both rice PEP RECEPTORs (PEPRs) and PRECURSORs of PEP (PROPEPs), particularly OsPROPEP3, were transcriptionally induced in leaf sheaths upon BPH infestation. Knockout of OsPEPRs impaired rice resistance to BPH, whereas exogenous application of OsPep3 improved the resistance. Hormone measurement and co‐profiling of transcriptomics and metabolomics in OsPep3‐treated rice leaf sheaths suggested potential contributions of jasmonic acid biosynthesis, lipid metabolism and phenylpropanoid metabolism to OsPep3‐induced rice immunity. Moreover, OsPep3 elicitation also strengthened rice resistance to the fungal pathogen Magnaporthe oryzae and bacterial pathogen Xanthamonas oryzae pv. oryzae and provoked immune responses in wheat. Collectively, this work demonstrates a previously unappreciated importance of the Pep signalling in plants for combating piercing‐sucking insect herbivores and promises exogenous application of OsPep3 as an eco‐friendly immune stimulator in agriculture for crop protection against a broad spectrum of insect pests and pathogens.

Molecular assessment of selected rice genotypes to study their reaction to brown planthopper and underlying resistance mechanisms

Six promising rice genotypes (IET 23993, GSR 234, RNR 23079, Bobhu Kongbu, HHZ 25-DT-1-DT-1 with HHZ 25 SAL DT 1-DT-1) quality yield attributes were identified as moderately resistant to brown planthopper after preliminary studies based on Standard Seed box screening test (SSST). These six genotypes were further investigated to determine the kind of host plant resistance mechanism(s) operating in them along with two resistant checks viz., PTB33 and BM71 and one susceptible check i.e., TN1. IET 23993 was found to possess all three types of resistance mechanisms viz., antixenosis, antibiosis and tolerance while the genotype GSR 234 exhibited only two types of mechanisms i.e., antixenosis and tolerance. The other four genotypes viz., RNR 23079, HHZ 25-DT-1-DT-1, HHZ 25 SAL DT 1-DT-1, and Bobhu Kongbu exhibited moderate level of either antibiosis or antixenosis mechanisms. Molecular analysis using specific SSR markers could able to assess the reason for exhibition of all three types of resistance mechanisms was due to likely presence of five Bph resistance genes in IET 23993.

SRAP analysis of brown planthopper (Nilaparvata lugens) populations maintained on differential rice host varieties

Abstract. Chaerani, Dadang A, Fatimah, Husin BA, Sutrisno, Yunus M. 2021. SRAP analysis of brown planthopper (Nilaparvata lugens) populations maintained on differential rice host varieties. Biodiversitas 22: 4266-4272. Brown planthopper (Nilaparvata lugens Stål) biotypes differ in virulence to rice varieties carrying different Bph resistance genes. These biotypes are reported can be genetically discriminated against using DNA markers. Four brown planthoppers (BPH) populations, which displayed two virulence phenotypes, have been produced by selection and adaptation on four differential host varieties. Sequence-related amplified polymorphism (SRAP) marker preferentially amplifies the coding regions in the genome and, thus, can discriminate the observed virulence variations among those populations. This study aimed to analyze the genetic variation of four developed BPH populations using SRAP markers. Genetic analysis of a total of 40 BPH females with 18 polymorphic primers revealed equal genetic diversity parameter values among populations (Na: 1.1 to 1.4, Ne: 1.2 to 1.3, I: 0.22 to 0.29, He: 0.14 to 0.18, and UHe: 0.15 to 0.19). Analysis of population structure by AMOVA indicated low genetic variation among populations (9%). Still, pairwise PhiPT population values between all pairs of the population revealed the presence of moderate genetic differentiations (PhiPT ranged from 0.57 to 0.133, P&lt;0.01). Two partial clusters in plots of PCoA were corresponded to two virulence groups, indicating the ability of SRAP markers to discriminate virulence phenotype. Further selection and adaptation are expected can form four desired virulence patterns with complete genetic separation among the population before its application as resistance screening agents of rice lines.

Evaluation of Guangxi common wild rice for resistance to brown planthopper using a new stem evaluation method

AbstractBrown planthopper [BPH, Nilaparvata lugens (Stål)] is considered one of the most important pests of rice (Oryza sativa L.), which poses a serious threat to rice production. Identifying resistant Oryza germplasm can provide reliable accessions for breeding BPH resistant rice cultivars. In this study, the stem evaluation method (SEM) was first applied to identify the BPH resistance of 1,221 accessions of common wild rice (O. rufipogon Griff.) collected from three different regions of Guangxi Province, China. From this screening, 58 BPH resistant accessions were screened a second time, with 33 accessions ultimately identified as stable, highly resistant germplasm as confirmed by a third identification at the adult‐plant stage. The distribution of the 58 BPH‐resistant common wild rice accessions varies significantly from region to region. Genotypic analyses based on 42 simple sequence repeat (SSR) markers revealed that these 58 BPH‐resistant accessions were genetically diverse, reflecting the rich genetic diversity reported in Guangxi common wild rice. Furthermore, results verified that the SEM is efficient for rapid and accurate screening of BPH‐resistant germplasm, especially when a limited number of seeds are available or elite breeding lines need to be screened immediately. Also, SEM is the best method for evaluating BPH resistance at the adult stage because fewer insects are needed, and it is possible to repeat the evaluation in the same crop season. The 33 resistant rice accessions are a potential source of novel BPH resistance genes for developing cultivars with improved BPH resistance.

Screening and Identification of Brown Planthopper Resistance Genes OsCM9 in Rice

The brown planthopper (BPH) is a major pest that causes serious damage to rice in countries with mild climates, including Korea, Japan, China, and Vietnam. Although a large number of BPH-resistant genes have been reported, BPH has recently evolved rapidly and in a variable manner due to rapid climate change and an unpredictable environment. The synthesis of secondary metabolites in plants is essential, as it provides resistance to various stressors, including pests such as BPH. For QTL mapping, a Samgang/Nagdong double haploid (SNDH) 113 population was used. The BPH resistance gene was screening by measure the resistance score using the phenotype that appeared after BPH inoculation in the 113 SNDH population. QTL mapping was used, and SSR marker RM584-RM225 of chromosome 6 and SSR marker RM331-S8024 of chromosome 8 were commonly identified. These locations contained transcription factors, phytohormones, signaling molecules, kinases, and secondary metabolites that defend plants from stressors in the environment. This region of chromosome 8 also contained a sequence similar to that of rice Choristmate mutase (OsCM9). CM is a gene that is not only found in rice, but also in thale cress (Arabidopsis thaliana (L.) Heynh.), maize (Zea mays L.), and soybean (Glycine max (L.) Merr.). After inoculation with BPH, the relative expression levels of OsCM9 were greater in the line resistant to BPH than in the line susceptible to BPH. The newly identified BPH-resistant gene OsCM9 can be used for the development of rice varieties that are capable of resisting sudden damage due to BPH, as the evolution of BPH due to climate change has had negative impacts on rice crops.

Recent Strategies for Detection and Improvement of Brown Planthopper Resistance Genes in Rice: A Review.

Brown planthopper (BPH; Nilaparvata lugens Stal) is considered the main rice insect pest in Asia. Several BPH-resistant varieties of rice have been bred previously and released for large-scale production in various rice-growing regions. However, the frequent surfacing of new BPH biotypes necessitates the evolution of new rice varieties that have a wide genetic base to overcome BPH attacks. Nowadays, with the introduction of molecular approaches in varietal development, it is possible to combine multiple genes from diverse sources into a single genetic background for durable resistance. At present, above 37 BPH-resistant genes/polygenes have been detected from wild species and indica varieties, which are situated on chromosomes 1, 3, 4, 6, 7, 8, 9, 10, 11 and 12. Five BPH gene clusters have been identified from chromosomes 3, 4, 6, and 12. In addition, eight BPH-resistant genes have been successfully cloned. It is hoped that many more resistance genes will be explored through screening of additional domesticated and undomesticated species in due course.

Recent advances in genomics‐assisted breeding of brown planthopper (Nilaparvata lugens) resistance in rice (Oryza sativa)

AbstractBrown planthopper (BPH),Nilaparvata lugens(Stål), is one of the most destructive insects that impair rice productivity per year. Till to date, 38 BPH resistance loci have been mapped from cultivated and wild species of rice. Of 38 resistance genes, eight genes (Bph14, Bph3, Bph26, bph29, Bph18, Bph6, Bph32andBph9) were positionally cloned. Four genes (Bph14, Bph26, Bph18andBph9) encode a typical CC‐NBS‐LRR domain‐containing protein. TheBph3encodes a cluster of three Lectin Receptor Kinase genes (OsLecRK1‐3) that confer broad‐spectrum resistance. Numerous other genes includingWRKY,MYB,DELLA,OsGID1,CYP71A1, mitogen‐activated protein kinase and micro RNAs have been functionally characterized that mediate resistance response to BPH. The comparative gene expression profiling, transcriptomics, proteomics and metabolomics studies have also accelerated the resistance breeding programme. In this review, we comprehensively updated the advances made in the identification of the BPH resistance genes and their functional validation to understand the molecular basis of host–BPH interaction. We also discuss the potential utility of the cutting‐edge genomics tools for breeding BPH resistance cultivars.

The control of the brown planthopper by the rice Bph14 gene is affected by nitrogen.

Brown rice planthopper (BPH) is a devastating rice pest in Asia. Bph14 is the first cloned BPH-resistance gene in rice, inducing callose deposition while impeding BPH feeding. Nitrogen application affects plant growth and resistance. However, there is little evidence on the influence of nitrogen on the callose content or regulation of rice BPH resistance. In this study, Luoyou9348 (containing Bph14 and highly resistant to BPH) and Yangliangyou6 (without Bph14 and susceptible to BPH) were planted under varying nitrogen regimes (0 , 90, 180 kg ha-1 ) to determine their effects on the resistance levels of rice to BPH feeding. The experiments involved BPH performance, plant volatile profiling and BPH preferences in laboratory and field experiments. We found that BPH egg hatching rate, total number of eggs laid and BPH preference increased with increasing nitrogen application in both rice varieties. However, the expression of Bph14, callose content and BPH feeding significantly declined with an increase in nitrogen fertilization in Luoyou9348, compared with Yangliangyou6. Also, the emission of volatile terpene compounds increased with increasing nitrogen application, which resulted in an increase in BPH numbers on both varieties. Two-way analysis of variance indicated a significant interaction between rice variety and nitrogen in BPH feeding behavior. Our findings provide an insight for addressing problems involved in the incorporation of insecticidal genes into crop plants. The effects of nitrogen on insecticidal gene expression in rice plant defense are discussed. © 2020 Society of Chemical Industry.