Boar Research Articles

The mercury and low molecular-weight antioxidants levels in ungulates of the Republic of Karelia

The high toxicity of mercury (Hg) poses a danger to the environment and humans, but studies of the concentration of this metal in organisms of terrestrial ecosystems are few. Ecotoxicologists also pay little attention to studying the role of antioxidant vitamins in protecting cells from toxic metals. The Republic of Karelia is one of the northwestern regions of Russia, the biogeochemical features of which can contribute to an increase in the mobility and bioavailability of Hg in food chains. The purpose of the work was to determine the concentration of Hg in the liver, kidneys, muscle and hair of ungulate mammals of the Republic of Karelia (wild boar Sus scrofa L. and moose Alces alces L.) and to analyze the relationship between the level of this toxic metal and the content of low molecular-weight antioxidants – reduced glutathione, retinol and α-tocopherol. Species and tissue-specific of the studied parameters in wild boars and moose are noted. The observations discovered by other researchers that omnivorous species accumulate more Hg in their tissues compared to herbivores, and also that this toxic metal is predominantly accumulated in the kidneys, while muscles contain a minimal amount, have been confirmed. Hg concentrations in most samples of liver and kidney of wild boars and in all samples of these same organs of moose were within the limits recorded for domestic pigs and deer, respectively. The levels of Hg we recorded in the tissues and hair of wild boars and moose were generally comparable to or lower than the levels of this metal noted in animals from other regions of Russia and other countries of the world. In wild boars and moose of Karelia, no statistically significant relationships were found between the Hg level and the content of the studied antioxidants in the internal organs. Moose were characterized by a higher content of α-tocopherol in the body than wild boars, which is a feature of this type of herbivorous ungulate mammal. The results of the study indicate a relatively low level of mercury pollution in terrestrial ecosystems in Karelia.

The transmission routes of African swine fever during an outbreak in Serbia July–August 2023: African swine fever virus detections in environmental samples and insects

African swine fever (ASF) is a highly contagious viral disease of domestic pigs and wild boar (Sus scrofa) caused by an arbovirus- African swine fever virus (ASFV), which is classified into the family Asfarviridae. Even though the main transmission route of ASFV is direct contact between animals and carcasses releasing ASFV into the environment, the role of other transmission routes such as via environmental contamination or insects remains in great part unclear. During an epidemic f ASF in Serbia in 2023, environmental samples (soil, feed, water and swabs from the pig barns), and insects [resulting in collection of adult and/or larval stages of non-biting flies (Diptera: Calliphoridae and Muscidae)] were collected in four locations in South Banat district of Serbia. To assess the possibility that insects carry the ASFV in infected courtyards, sticky fly traps and open Petri dishes containing meat mixed with humid cotton wads were offered in three locations during the five days of the experiment in the Belgrade area. Furthermore, to confirm the role of flies in ASF in mechanical transmission pathway in Serbia, L2 and L3 larvae of flies (Lucilia sericata Meigan, 1826; Stomoxys calcitrans Linnaeus, 1758) were collected from the pig carcasses from infected farms, bred to adults in the Laboratory and an ASFV spiked meat meal was placed into cages with three-day-old flies (n = 52) to estimate positivity of flies and duration of mechanical transmission of ASFV. The results from the environmental samples showed no positive ASFV DNA detection, the same was true for the samples from meat-based traps and sticky fly traps, while ASFV DNA was detected in three samples containing eggs, L1 and L3 fly larvae collected from carcasses and adult flies (L. sericata). In experimental conditions, only one S. calcitrans fly tested positive on day 1 post-infection. The results implicate the possible role of Lucilia sp. flies in the mechanical transmission of ASFV as well as S. calcitrans in Serbia during an outbreak, while ASFV DNA was not detected in environmental samples in this study.

Host Innate and Adaptive Immunity Against African Swine Fever Virus Infection

Africa swine fever virus (ASFV) is the causative agent of African swine fever (ASF), a highly contagious hemorrhagic disease that can result in up to 100% lethality in both wild and domestic swine, regardless of breed or age. The ongoing ASF pandemic poses significant threats to the pork industry and food security, with serious implications for the sanitary and socioeconomic system. Due to the limited understanding of ASFV pathogenesis and immune protection mechanisms, there are currently no safe and effective vaccines or specific treatments available, complicating efforts for prevention and control. This review summarizes the current understanding of the intricate interplay between ASFV and the host immune system, encompassing both innate and adaptive immune responses to ASFV infection, as well as insights into ASFV pathogenesis and immunosuppression. We aim to provide comprehensive information to support fundamental research on ASFV, highlighting existing gaps and suggesting future research directions. This work may serve as a theoretical foundation for the rational design of protective vaccines against this devastating viral disease.

PCV2 AND PCV3 GENOTYPING IN WILD BOARS FROM SERBIA

Porcine circoviruses 2 and 3 (PCV2 and PCV3) are known agents of diseases in domestic pigs and wild boars. PCV2 is an economically important pathogen causing porcine circovirus-associated diseases (PCVAD), while the recently discovered PCV3 is associated with similar disorders. Wild boars can serve as a PCV reservoir for domestic pigs, which is a particular risk for pig farms with low biosecurity. Reports of these infections in Serbia are sporadic, and this study was intended as a follow-up to an earlier study. Our aim was to assess the prevalence and genetic characteristics of PCVs circulating in wild boars in a region in north-eastern Serbia with extensive hunting areas. In our study of 103 samples, 17.48% tested positive for PCV2 and 15.53% for PCV3. The low co-infection rates in 2.94% of the PCR-positive samples, suggests these viruses circulate independently. PCV2 prevalence was lower than in our previous study (40.32% out of 124 samples), but the genetic stability of circulating strains was detected with a clear genotype shift towards PCV2d-2. Moreover, this is the first report of PCV3 occurrence in wild boar in Serbia, and the detected strains were grouped into two genotypes: PCV3-1 and PCV3-3c. The PCV3-1 sequences were clustered with German strains, indicating the prevalence of this genotype in Europe. However, no further geographical correlation could be established, as the PCV3-3c representative was separated within the cluster containing Chinese and Indian strains. Furthermore, there was no correlation between PCV positivity and pathological findings in the sampled animals indicating subclinical infection.

Abstract Su202: Physiological response to vasopressor administration during hemodynamic-directed CPR

Background: The hemodynamic response to successive vasopressor doses during CPR and its association with survival is poorly defined. Understanding these relationships can facilitate identification of alternative vasopressor strategies. Hypothesis: Non-survival is associated with lower responsivity to successive vasopressors. Methods: We performed retrospective analysis of hemodynamic data acquired in pediatric swine models (sus scrofa, 9-12kg) of asphyxia-associated ventricular fibrillation cardiac arrest with use of hemodynamic-directed CPR (n=175). Starting 2m into CPR, if hemodynamic targets were not met, vasopressors were given in cycles comprising two doses of 0.02mg/kg epinephrine (Epi) followed by vasopressin (Vaso, 0.4U/kg), separated by a minimum of 1m. After a minimum of 2m, the cycle was repeated. Hemodynamic response was evaluated using the peak diastolic blood pressure (DBP) within 1m for Epi, 2m for Vaso administration and the difference between the initial and peak DBP (delta DBP). Subjects were classified as “responder” if either a delta DBP > 5 mmHg or a peak DBP > 25 mmHg was achieved, and a “non-responder” otherwise. Animals were deemed “survivors” if ROSC was achieved following initial defibrillation. The change in delta DBP for successive vasopressors was compared in survivors versus non-survivors using two-sided Wilcoxon rank-sum tests. Continuous variables are summarized using the median with interquartile ranges. The burden of “non-response” was used to a construct confusion matrix and calculate performance. Results: Non-survivors (n=30) had lower delta DBP than survivors (n=145) following successive vasopressor administration at the first cycle (first Epi dose: 7.8 [2.4, 14] vs 16 [7.5, 24], p< 0.01; second Epi: 2.0 [0, 4.7] vs 7.1 [2.0, 12], p< 0.01; Vaso : 1.1 [0, 2.3] vs 7.1 [2.0, 12], p< 0.01). Classification as a “non-responder” at the first cycle (Epi-Epi-Vaso) was significantly predictive of non-survival (Sensitivity 32%, Specificity 92%). Animals that failed to respond to all vasopressors at the first cycle had a significantly increased rate of mortality (86%; 6 non-survivors, 1 survivors) compared to animals that responded to all 3 vasopressors (13%; 16 non-survivors, 111 survivors). Conclusion: Mortality was significantly associated with lower DBP response to successive vasopressors during hemodynamic-directed CPR in pediatric swine models of cardiac arrest, which may suggest a critical timepoint to activate ECPR.

Development and evaluation of an autism pig model.

Developing cost-effective and disease-relevant animal models is essential for advancing biomedical research into human disorders. Here we investigate the feasibility of a pig model for autism spectrum disorder (ASD) using embryonic exposure to valproic acid (VPA), an antiepileptic drug known to increase ASD risk. We established experimental paradigms to assess the behavioral characteristics of these pig models. Administration of VPA to Bama miniature pigs (Sus scrofa domestica) during critical embryonic stages resulted in abnormal gait, increased anxiety levels, reduced learning capabilities and altered social patterns, while largely preserving social preference of treated piglets. Notably, we detected significant neuroanatomical changes in cortical regions associated with ASD in the VPA-treated pigs, including cortical malformation, increased neuronal soma size, decreased dendritic complexity and reduced dendritic spine maturation. Transcriptome analysis of the prefrontal cortex of VPA-treated pigs further revealed substantial alterations in the expression of genes linked to ASD, especially genes of the dopamine signaling pathway, highlighting the model's relevance and potential for shedding light on ASD's underlying neuropathological and molecular mechanisms. These findings suggest that pig models could serve as a promising alternative to traditional rodent models and provide a more ethical substitute for the use of primates in translational research on neurodevelopmental disorders.

Exploring the Relationship Between the Size and Diverticular Number of Carpal Gland in Four Pig (Sus Scrofa) Populations

The carpal gland is an important exocrine gland in pigs, functioning mainly through diverticula that release strongly odorous secretions. The size of the carpal gland and the number of diverticula may be related to its function. To measure its size, the gland must be dissected from the foreleg, and this procedure is time-consuming and cumbersome. The diverticulum is the outlet of the carpal gland, and its number correlates with the carpal gland size, but the correlation coefficient between them is still unknown. To explore the relationship between the size and diverticular number of the carpal gland, 788 pigs from four populations were used in this study. The length, width, thickness, weight and volume of the carpal gland were measured, together with its diverticular number. The phenotypic correlation coefficient between each pair of the recorded traits was calculated, and a two-factor analysis of variance was used to test whether sex and population have effects on the phenotypes. The carpal gland is a flat small stick with a length of 1.8–8.6 cm, width of 0.6–2.5 cm, and thickness of 0.2–0.8 cm, and its specific gravity is 0.51–1.36. Each carpal gland has 0 to 10 diverticula, and 82.3% carpal glands have 2–6 diverticula. The diverticular number correlates positively with the weight (r = 0.57 and rs = 0.58, p < 2.2 × 10−16) and volume (r = 0.55 and rs = 0.56, p < 2.2 × 10−16). Population and sex only explain 20% of the phenotypic variance, suggesting that the 80% of carpal gland influences remain unknown. In conclusion, the diverticular number can be used as a proxy for the weightand volume of the carpal gland, because it is easy to count and has a significant positive correlation with the size of thecarpal gland.

Grading Habitats for Ticks by Mapping a Suitability Index based on Remotely Sensed Data and Meta® population dataset in Aosta Valley, NW Italy.

Ticks represent a reservoir of zoonotic pathogens, and their numbers are increasing largely in wildlife. This work is aimed at producing maps of suitable habitats for ticks in Aosta Valley, Italy based on multitemporal EO data and veterinary datasets (tick species and distribution in wild hosts). EO data were processed in Google Earth Engine considering the following inputs: A) Growing Degree Ticks (GDT), B) NDVI from MOD09GA, C) NDVI entropy, D) distance from water bodies, E) topography, F) rainfalls from CHIRPS as monthly composites along the 2020, 2021 and 2022 years. Ticks were collected from hunted, injured, and found-dead wild animals ( Sus scrofa, Capreolus capreolus, Rupicapra rupicapra, Cervus elaphus); they were labeled at species level using taxonomic keys. Between September 2020 and December 2022, a total of 90 ticks were collected from 89 wild animals. Ixodes ricinus was the most prevalent tick species, followed by Dermacentor marginatusand Dermacentor spp. Molecular analyses demonstrated the presence of Anaplasma spp., B. burgdorferi sensu lato and Rickettsia spp. pathogens in infected ticks. To assess human population potential exposure to tick Meta® population dataset was used. In conclusion this study shows the potentialities of Remote sensing improving the technological transfer to the veterinarian sector.

Early behavioral indicators of aberrant feces in newly-weaned piglets.

Post-weaning diarrhea (PWD) is a frequently occurring health and welfare issue in weaned piglets. Behavioral changes indicating impaired health may be detectable before the onset of signs and could be useful to detect the development of PWD early, enabling targeted and timely interventions. Current algorithms enable automated behavioral classification on the group level, while PWD may not affect all piglets in one pen and individual level analysis may be required. Therefore, this study aimed to assess whether changes in pen activity or individual piglet behavior can be early indicators of the occurrence of PWD. During 3 replicated rounds, 72 piglets (Sus scrofa domestica, Landrace x Large White) weaned at 27days of age, were housed in 4 pens with 6 piglets each. Individual fecal color and consistency were scored (0-5; ≥ 3 considered as aberrant feces) six times during the first two weeks post-weaning using rectal swabs. Additionally, using a similar scoring scale, feces on the pen floor were assessed daily. Two methods were applied for behavioral scoring. Individual behaviors (eating, drinking, standing, walking; n = 48) were scored manually and instantaneously with a five-minute interval from videos of the first two rounds, while pen activity (eating, drinking, moving; n = 12) was analyzed automatically and continuously using a commercially available algorithm from videos of all three rounds. Piglets showing a relatively higher proportion of standing behavior one day before fecal scoring had increased odds of an aberrant fecal color score (odds ratio (OR): 4.8; 95% confidence interval (CI): 1.5-15.3). Furthermore, odds of aberrant colored feces increased in pens where piglets showed more moving activity two days before (OR: 6.14; 1.26 < 95%CI < 29.84), which was also found for fecal consistency (OR: 4.77; 95%CI: 1.1-21.6). Our results indicate that increased standing in individual piglets and an increased moving activity on the pen level may be important behavioral indicators of PWD before the onset of diarrhea. Further development of current algorithms that can identify behavioral abnormalities in groups, from the pen to the individual level, may therefore be a promising avenue for improved and targeted health and welfare monitoring.

How Does African Swine Fever Virus Evade the cGAS-STING Pathway?

African swine fever (ASF), a highly infectious and devastating disease affecting both domestic pigs and wild boars, is caused by the African swine fever virus (ASFV). ASF has resulted in rapid global spread of the disease, leading to significant economic losses within the swine industry. A significant obstacle to the creation of safe and effective ASF vaccines is the existing knowledge gap regarding the pathogenesis of ASFV and its mechanisms of immune evasion. The cyclic GMP–AMP synthase (cGAS)–stimulator of interferon genes (STING) pathway is a major pathway mediating type I interferon (IFN) antiviral immune response against infections by diverse classes of pathogens that contain DNA or generate DNA in their life cycles. To evade the host’s innate immune response, ASFV encodes many proteins that inhibit the production of type I IFN by antagonizing the cGAS-STING signaling pathway. Multiple proteins of ASFV are involved in promoting viral replication by protein–protein interaction during ASFV infection. The protein QP383R could impair the function of cGAS. The proteins EP364R, C129R and B175L could disturb the function of cyclic guanosine monophosphate-adenosine monophosphate (cGAMP). The proteins E248R, L83L, MGF505-11R, MGF505-7R, H240R, CD2v, E184L, B175L and p17 could interfere with the function of STING. The proteins MGF360-11L, MGF505-7R, I215L, DP96R, A151R and S273R could affect the function of TANK Binding Kinase 1 (TBK1) and IκB kinase ε (IKKε). The proteins MGF360-14L, M1249L, E120R, S273R, D129L, E301R, DP96R, MGF505-7R and I226R could inhibit the function of Interferon Regulatory Factor 3 (IRF3). The proteins MGF360-12L, MGF505-7R/A528R, UBCv1 and A238L could inhibit the function of nuclear factor kappa B (NF-Κb).

Economic effects of wild boar damage to crops in protected areas of Nepal

Human wild-boar conflict is one of the prominent issues in Nepal, especially in areas adjacent to protected areas. Wild boars cause substantial damage to the agricultural crops and affect the lives of rural farmers through economic loss. However, the extent of this loss varies across protected areas. Thus, this study aims to compare the economic loss due to crop damage by wild boar between two protected areas with different management regimes; Shuklaphanta National Park (ShNP) and Dhorpatan Hunting Reserve (DHR). We used a questionnaire survey and descriptive statistics to characterize and compare the pattern of human wild boar conflicts between ShNP and DHR. Altogether, the two protected areas experienced a crop damage of 87,035.78kg with an estimated economic loss of 26,389 USD in our study. The most damaged crop in the ShNP was paddy whereas that in DHR was potato. We recorded a higher crop damage and economic loss in ShNP than in DHR. However, the severity of conflict is higher in DHR with around 8% of the total production damaged by wild boar. Although the government declared wild boar an agricultural menace in 2023 and permitted killing on private lands, local communities should also apply other mitigation measures to prevent wild boars from entering crop fields. Additionally, the potential introduction of trophy hunting in ShNP (already permitted in DHR), following comprehensive studies, could help reduce economic losses associated with human-wild boar conflicts. Such combined efforts could create a more sustainable approach to managing wild boar populations while safeguarding local agriculture and livelihoods.

Measuring transboundary disease spread - ASF in wild boars straddling Piedmont and Liguria

The aim of this paper is to describe the impact, dynamics and risk factors of the incursion of the African Swine Fever (ASF) virus detected in early 2022 in the wild boar population straddling Piedmont and Liguria, 24 months after its emergence.A study area of 4,162.2 square kilometres, comprising 234 municipalities in Liguria and Piedmont (north-western Italy), along with an external buffer zone, was considered. The epidemiological units were wild boars tested for ASF using real-time PCR between late December 2021 and December 31, 2023. The data were obtained from passive and active surveillance. Conventional methodologies were applied in the analysis of time series of tests, cases, or prevalence rates of positive animals. Maps were used to visualise and compare the monitoring activities, the location of cases and municipal standardised prevalence ratios. Clustering of high and low trends was studied by semester using a space-time permutation model. Risk factors analysis was based on multivariate Poisson regression modelling.Over the 2-year study period, the epidemic's spread was closely monitored by testing 10,412 wild boars (25% of them from passive surveillance). Probability of disease detection was 10.9 times higher among found dead animals compared with animals tested in active surveillance. Difficulties in carcass searching led to heterogeneities in surveillance sensitivity achieved locally and inherent uncertainties. A total of 1,165 wild boars that tested positive for ASF have been detected in 125 municipalities across three provinces. The outbreak has expanded over time and exhibited an increasing trend, with an epidemic doubling time of 10.7 months. There was seasonality, with an increasing trend from summer to spring. Prevalence rates followed the same temporal pattern. Significant low and high clusters respectively indicated endemic episodes in the interior areas of virus circulation and an ongoing invasion of surrounding regions.The characteristics of this outbreak align with the cycle of wild boar habitat transmission observed in other outbreaks across Europe. The measures implemented were not sufficient to stop the epidemic: however, targeted interventions such as depopulation campaigns, reinforcement of physical barriers and increased biosecurity measures have prevented local spillover to domestic pigs and partially hindered the advance of the disease. In addition, the shown seasonality of the disease, likely can enhance control measures. The ongoing studies of the local wild boar populations and the evolution the epidemic along with the lessons learned so far will improve the efficiency and effectiveness of efforts to limit and ultimately eradicate the disease.

Parasitic fauna of wild boars (Sus scrofa) from the northwestern region of São Paulo state, Brazil.

In Brazil, the wild boar (Sus scrofa) is the main invasive exotic species, responsible for causing various economic, environmental, and health damages to biodiversity. In view of the above, we aimed in our study to investigate the occurrence of endo and ectoparasites in free-ranging wild boars in the northwest region of the state of São Paulo, Brazil. In total, 45 animals of different sexes and ages were examined in this research. Fecal and urine samples were processed using coproparasitological techniques. Multiple incisions in muscles, liver, and pancreas were also made to investigate cestodes and trematodes, and the entire epidermal region of the animals was analyzed for ectoparasites search. In our study, we demonstrate an occurrence of 97.77% (44/45) and 43.33% (13/30) of endo and ectoparasites, respectively, in wild boars, with the identification of eggs of Metastrongylus spp., Strongyloides ransomi, Trichuris suis, Stephanurus dentatus, and nematodes of the order Strongylida, as well as oocysts of Eimeriidae protozoa. Ectoparasite infestations were mainly caused by ixodids of the genus Amblyomma spp. and by larvae of Cochliomyia hominivorax.

Influence of Human Hunting Strategies and Large Carnivore Presence on Population Dynamics of European Facultative Scavengers.

Ungulates serve as the primary carrion source for facultative scavengers in European ecosystems. In the absence of large carnivores, such as wolves (Canis lupus), human hunting leftovers are the main source of carrion for these scavengers. Additionally, wild boars (Sus scrofa) are heavily culled in many ecosystems and are both a significant prey species for wolves as well as a key scavenger. Nowadays, wolves and wild boars are re-establishing their historical home ranges. However, it remains unclear how their presence influences the population dynamics of facultative scavengers under different scenarios of human hunting strategies. We simulated the biomass densities of all states in the trophic web including European scavengers and wolves using an ordinary differential equations (ODE) model. The presence of wolves led to a positive trend in scavenger biomass in general. However, in general, we found that plant-based resources were more important for scavenger dynamics than carrion, regardless of whether the carrion originated from human hunting or wolf predation. Only when wolves were absent but boars present, the human hunting strategy became important in determining scavenger dynamics via carrion supply. In conclusion, our model indicates that population dynamics of facultative scavengers are not mainly driven by the availability of carrion, but rather by the presence of and competition for vegetation. Furthermore, our simulations highlight the importance of adapting human hunting strategies in accordance with the re-establishment of wolf and boar as these can cause fluctuating population patterns over the years.

Percepción social y tendencia poblacional de mesocarnívoros y ungulados en el noroeste de la península ibérica

Mesocarnivores and ungulates were historically considered as harmful species to humans. Research into the relationship between the actual and perceived population abundance or trend can be useful in mitigating conflicts with these animals. In this work, the information on population trends (i. e. increasing, maintenance or decreasing abundance) obtained through semi-structured interviews with local people was contrasted with the data from a two-times-replicated camera-trap study, separated eight years between them, in the northwestern Iberian Peninsula. In general, we found a divergence between the two sources of information regarding the population trend in only two of the six species under study, red fox and wild boar. Specifically, camera-trap results showed a decrease in red fox catches, not reflected in the face-to-face interviews. On the contrary, face-to-face interviews indicated an increase in wild boar populations, not reflected in the camera-trap study. The findings of this study underscore the necessity of integrating different information sources to accurately assess the population dynamics of mesocarnivores and ungulates, thereby enabling informed management decisions.

Unveiling game meat: an analysis of marketing mix and consumer preferences for a forest ecosystem product

This study explores the dynamics of the game meat market, with a particular focus on venison and wild boar meat, to assess the impact of a nuanced marketing mix and strategy grounded in a comprehensive customer analysis. By conducting three pivotal research studies—namely, the Omnibus Survey (2022) and Consumer Market Analysis Polls (2021 and 2023)—and analysing their data, this research comprehensively analyses buyers’ preferences, motivations, and purchasing patterns. This paper is guided by three research questions aimed at examining the relationship between the game meat consumption and engagement in forest ecosystem services, including forest visitation, the sociodemographic characteristics of consumers and the criteria for market segmentation. The analysis focuses on identifying factors influencing the game meat consumption and examines how these factors may influence consumer behavior over time. It also explores the implications for the development of marketing strategies, based on Michael E. Porter’s approach, which is discussed in detail. Additionally, the research evaluates the role of game meat within the context of forest ecosystem services, its contribution to forest reforestation initiatives, and its relevance in the formulation of forest policy. This examination highlights the dual nature of game meat as both a market commodity and a critical element in ecosystem management and policy frameworks, seeking to harmonize the economic and ecological objectives.

Evaluation of β-Actin and Mitochondrial DNA Levels in Determining the Age of Suidae Remains.

African Swine Fever (ASF) is an infectious disease affecting pigs and wild boars, causing significant economic losses. Epidemiological surveillance plays an important role in minimizing its impact. The aim of this study was to evaluate the usefulness of β-actin DNA and mitochondrial DNA (mtDNA) levels in determining the age of animal remains from the Suidae family, which could be helpful in epidemiological investigations. The study included selected tissues and internal organs of Sus scrofa domesticus, exposed to natural environmental conditions or kept in stable 4 °C conditions, to assess the levels of β-actin and mtDNA over a period of 18 months. The levels of both tested parameters exhibited the expected decreasing trend over time. However, in most tissues, some discrepancies from this general pattern were observed. The results obtained for bone marrow showed a consistent downward trend and a strong correlation between mtDNA and β-actin, with long-term detectability (up to the 13th month of the study). Therefore, bone marrow could be considered a matrix of choice for age assessment. However, due to various influencing factors, further studies are required.

A method for constructing demographic profiles of Capra aegagrus/C. hircus using logarithm size index scaling

Sex-specific demographic profiles of archaeological animal bone assemblages are key to being able to reconstruct the varied strategies used by ancient hunters and herders to harvest animals from both wild and managed herds. Nearly 25 years ago Zeder developed a method for constructing these profiles based on the study of a large collection of modern wild and domestic caprines that combined metric data and a refined system for determining age of death of archaeological caprine bones (Zeder, 2001, 2006a, 2008; Zeder and Hesse, 2000). The utility of this method was limited, however, by its reliance on individual dimensions from single elements, subjecting the method to sample size limitations. This paper presents a new method for constructing demographic profiles for assemblages of goat remains from archaeological sites drawing on a method developed by Zeder and Lemoine for Sus scrofa (Zeder and Lemoine, 2020a). The method uses normalized metric data following the Logarithm Size Index (LSI) scaling technique designed to address sample size issues. LSI values of post-crania metric data are shown to reflect the strong sexual dimorphism in body size in modern wild goats which is evident in the post-crania of animals over one year of age. Once adjusted for regional body size differences, as well as differences in the scaling of different post-cranial elements, the mid-point of the range of LSI values is shown to be a reliable and highly accurate way of distinguishing between the elements of females and males and for constructing sex-specific age profiles based on these identifications. This method is applied to metric data of goat assemblages from four archaeological sites in the Zagros — two representing hunted animals (Yafteh Cave and Asiab) and two representing early managed herds (Ganj Dareh and Ali Kosh). The paper concludes by offering recommendations, and caveats, for the use of this method in building sex-specific demographic profiles of ancient goat assemblages.

Effect of seasons on the decomposition by necrophagous insects of pig (Sus scrofa domesticus L.) carcasses exposed to the open air in the Sudano-guinean and Sub-sudanese zones of Côte d'Ivoire

Determining the post-mortem interval (PMI) of a corpse discovered 72 hours after death is becoming complex and imprecise in forensic medicine. It is necessary to use other investigative methods to determine the date of death. The aim of this research was to determine the impact of the seasons on the decomposition of pig corpses exposed to the open air by necrophagous insects. The research was carried out in the North (at the Botanical Garden of the Peleforo Gon Coulibaly University in Korhogo) and in the Centre (in the Bouaké region). Insects were collected directly from decomposing carcasses using a mowing net and flexible forceps for larvae and Coleoptera. Pitfall-traps were also used for collection. Diptera and Coleoptera were collected during the dry and rainy seasons in the Sudano-guinean and Sub-Sudanese zones. Chrysomya albiceps, belonging to the Calliphoridae, was the majority species. Because of its plethora of species in the two study areas, C. albiceps could be one of the main species for determining the minimum MPI in Côte d'Ivoire. Five stages of decomposition were observed in the two study zones, although a sixth stage (dry putrefaction) was observed in the Sub-sudanese zone during the harmattan period. Stratiomyidae and Piophilidae contributed to the total decomposition of carcasses during the rainy season. The Histeridae family was the richest in species. Dermestes maculatus was the richest in individuals. Carcasses in the rainy and dry seasons were respectively decomposed by an average of 97.18% in the rainy season and 84.32% in the dry season in the two study areas.

Population Structure and Selection Signatures in Chinese Indigenous Zhaotong Pigs Revealed by Whole-Genome Resequencing.

Zhaotong pig (ZTP) is a Chinese indigenous pig breed in Yunnan Province, known for its unique body shape and appearance, good meat quality, strong foraging ability, and adaptability. However, there is still a lack of research on its genome. In order to investigate the genetic diversity, population structure, and selection signatures of the breed, we conducted a comprehensive analysis by resequencing on 30 ZTPs and comparing them with genomic data from 10 Asian wild boars (AWBs). A total of 45,514,452 autosomal SNPs were detected in the 40 pigs, and 23,649,650 SNPs were retained for further analysis after filtering. The HE, HO, PN, MAF, π, and Fis values were calculated to evaluate the genetic diversity, and the results showed that ZTPs had higher genetic diversity and lower inbreeding coefficient compared with AWBs. Population structure was analyzed using NJ tree, PCA, ADMIXTURE, and LD methods. It was found that ZTPs were population independent of AWBs and had a lower LD decay compared to AWBs. Moreover, the results of the IBS genetic distance and G matrix showed that most of the individuals had large genetic distances and distant genetic relationships in ZTPs. Selection signatures were detected between ZTPs and AWBs by using two methods, FST and π ratio. Totals of 1104 selected regions and 275 candidate genes were identified. Finally, functional enrichment analysis identified some annotated genes that might affect fat deposition (NPY1R, NPY5R, and NMU), reproduction (COL3A1, COL5A2, GLRB, TAC3, and MAP3K12), growth (STAT6 and SQOR), tooth development (AMBN, ENAM, and ODAM), and immune response (MBL2, IL1A, and DNAJA3). Our results will provide a valuable basis for the future effective protection, breeding, and utilization of ZTPs.