Biparental Inbreeding Research Articles

Inbreeding depression affects the growth of seedlings of an African timber species with a mixed mating reproductive system, Pericopsis elata (Harms) Meeuwen

Selfing or mating between related individuals can lead to inbreeding depression (ID), which can influence the survival, growth and evolution of populations of tree species. As selective logging involves a decrease in the density of congeneric partners, it could lead to increasing biparental inbreeding or self-fertilization, exposing the population to higher ID. We assessed the influence of inbreeding on the growth of a commercial timber species, Pericopsis elata (Fabaceae), which produced about 54% of self-fertilized seedlings in a natural population of the Congo basin. We followed the survival and growth of 540 plants raised in a plantation along a gradient of plant density (0.07–15.9 plants per m2). Parentage analysis allowed us distinguishing selfed and outcrossed seedlings. The annual growth was higher for outcrossed than selfed plants, on average by 10.8% for diameter and 12.9% for height growth. Based on the difference in above ground biomass between selfed and outcrossed seedlings after 41 months, we estimated the level of ID at δ = 0.33, while a lifetime estimate of ID based on the proportions of selfed plants at seedling and adult stages led to δ = 0.7. The level of ID on growth rate did not change significantly with age but tended to vanish under high competition. Pericopsis elata is a particularly interesting model because inbreeding depression is partial, with about 26% of reproducing adults resulting from selfing, contrary to most tropical tree species where selfed individuals usually die before reaching adulthood. Hence, the risks of ID must be considered in the management and conservation of the species.

Genetic Diversity, Mating System, and Seed Viability Reveal a Trade-Off between Outcrossing and Inbreeding in Pinus yunnanensis var. tenuifolia, an Ecologically Important Conifer Species Growing in a Hot-Dry River Basin Habitat in Southwest China

Revealing the relationship between the mating system (i.e., the outcrossing/inbreeding degree) and the fitness of seeds in tree species under wild conditions is essential for understanding the ecological adaptability and evolutionary stability of the species. This study collected open-pollinated seeds from seven wild populations of Pinus yunnanensis var. tenuifolia that exhibited fragmentation in the Nanpan–Hongshui River basin, an ecologically fragile area in China. The seeds and sprouts (germinated seeds) from 20 families were genotyped (24 seeds and 24 sprouts per family) using twelve microsatellite loci to reveal the genetic diversity, mating status, and effect of inbreeding on the three seed quality indicators (thousand-seed weight, germination rate, and germination potential). The three seed quality indicators differed significantly between families (p < 0.001). Higher values of genetic diversity (except the observed heterozygosity) were observed in the sprout group than those in the seed group. Families from different populations showed a notable genetic differentiation (Φst = 0.12), and a large part of families from the common populations had a high degree of coancestry, which signified that the current habitat fragmentation is limiting gene flow between populations. High levels of outcrossing rates (tm) were observed in both the seed group (tm = 0.974) and the sprout group (tm = 0.978), indicating that a low proportion of seeds were self-fertilized. Although there was a slightly higher single outcrossing rate (ts = 0.888) and a lower proportion of biparental inbreeding (tm − ts = 0.077) in sprouts compared to the seeds (ts = 0.871, tm − ts = 0.091), indicating that a part of inbred seeds were purged during the germination stage, curve fitting between the outcrossing rate and seed quality indicators showed that a certain degree of biparental inbreeding (ts between 0.89 and 0.91 and tm − ts between 0.09 and 0.11) did have a positive effect on seed germination ability. This highlights that excessive inbreeding or outbreeding seems to be unfavorable to seed viability. The peculiar relationship between seed viability and the mating system in P. yunnanensis var. tenuifolia was likely an evolutionary consequence of a trade-off between the nature of mixed mating and its specific ecological niche.

Pollen dispersal distance is determined by phenology and ancillary traits but not floral gender in an andromonoecious, fly-pollinated alpine herb

Pollen-mediated gene flow and spatial genetic structure have rarely been studied in alpine plants that are pollinated by dipteran insects. In particular, it is not clear how different floral traits, such as floral gender, phenology, and ancillary traits, may affect pollen dispersal distance within alpine plant populations. In this study, we conducted a paternity analysis to track pollen flow in a population of Pulsatilla alpina, an andromonoecious alpine herb producing male and bisexual flowers. We found that the pollen was dispersed over short distances (mean = 3.16 m), with a dispersal kernel following a Weibull distribution. Nonetheless, spatial genetic structure was weak in the population (Sp statistic = 0.013), pointing to effective seed dispersal and/or high inbreeding depression. The pollen dispersal distance was independent of the gender of the flower of origin but depended positively on floral stalk height and negatively on flowering date and tepal length. Although male siring success did not correlate with pollen dispersal distance, selection may favour traits that increase the pollen dispersal distance as a result of reduced bi-parental inbreeding. Our study not only provides new insights into the nature of pollen dispersal of alpine plants, but also reveals the effects of floral traits on a component of male reproductive success.

Contradistinctive floral attributes, pollination guilds and their consequence on the outcrossing rate in two elevational morphs of Rhododendron arboreum Sm.

Infraspecific floral trait variations may appear in response to elevational differences in alpine plant species. There is enormous information on the selection of such morphs mediated by biotic and/or abiotic variables. Whether such differences contribute to differences in reproductive strategy and mating outcomes is rarely investigated. We investigated these aspects in two distinct elevational floral morphs (Red and Pink) of Rhododendron arboreum Sm. in Western Himalaya. The red morphs occupy the lower elevations while pink morphs the higher elevations. The two morphs differ in floral traits like phenology, dimension, display, quality of floral rewards, and pollinators that happen to influence interaction with available pollinator pool at each elevation. The pink morph exhibits entomophily, while the red ones show ornithophily. Although experimental pollinations established that both the morphs are self-compatible, selfing results in significantly lower fruit-set than either cross- or open-pollinations. The outcrossing rate in the red morph, as determined by using simple sequence repeat (SSR) markers, was higher (tm=0.82) than that in the pink morph (tm=0.76), with a tendency of the latter to be shifting towards mixed-mating strategy. However, the extent of biparental inbreeding was comparable among the two morphs. It is inferred that the differences in the mating outcomes among the morphs in the tree species are linked to those emerging from floral traits and the pollination by different functional groups of floral visitors.

Maternal effects and inbreeding depression in post-translocation progeny of Campanula glomerata.

Evaluation of plant translocation success based on fitness-related quantitative traits combined with molecular markers may contribute to a finer assessment of inbreeding, selective and rescue processes, which might have long-term consequences for population dynamics and viability. We investigated fitness traits (seed germination, seedling viability, and juvenile growth and mortality) combined with 15 microsatellite loci of the first post-translocation seed progeny from two translocated populations of Campanula glomerata, an insect-pollinated, self-incompatible perennial herb. We examined whether inbreeding, heterosis through admixture, translocation site and maternal transplant seed source origin and lineage might affect seed quality and juvenile growth in controlled cultivation conditions. Flower production and seed germination of the transplants was higher in one of the two translocation sites, which might be related to differences in soil and vegetation composition and cover. Strong maternal effects related to seed source origin and lineage were found on progeny size, with the largest transplants producing the largest progeny. The differences in rosette diameter were maintained across the whole growth period measured. There was inbreeding depression (rather than heterosis) related to biparental inbreeding at the early progeny growth stage, also expressed through juvenile mortality. Our findings highlight that maternal transplant origin, especially when seed sources consisted of small, fragmented remnants, might have a selective value on fitness in the post-translocation generations. If maternal effects and inbreeding depression persist, they might affect global genetic diversity patterns in the long term. Further admixture in the next generations might buffer maternal and inbreeding effects or lead to outbreeding depression.

Fine-scale genetic structure in the orchid Gymnadenia conopsea is not associated with local density of flowering plants.

Density-dependent pollinator visitation can lead to density-dependent mating patterns and within-population genetic structure. In Gymnadenia conopsea, individuals in low-density patches receive more self pollen than individuals in high-density patches, suggesting higher relatedness at low density. Ongoing fragmentation is also expected to cause more local matings, potentially leading to biparental inbreeding depression. To evaluate whether relatedness decreases with local density, we analyzed 1315 SNP loci in 113 individuals within two large populations. We quantified within-population genetic structure in one of the populations, recorded potential habitat barriers, and visualized gene flow using estimated effective migration surfaces (EEMS). We further estimated the magnitude of biparental inbreeding depression that would result from matings restricted to within 5 m. There was no significant relationship between local density and relatedness in any population. We detected significant fine-scale genetic structure consistent with isolation by distance, with positive kinship coefficients at distances below 10 m. Kinship coefficients were low, and predicted biparental inbreeding depression resulting from matings within the closest 5 m was a modest 1-3%. The EEMS suggested that rocks and bushes may act as barriers to gene flow within a population. The results suggest that increased self-pollen deposition in sparse patches does not necessarily cause higher selfing rates or that inbreeding depression results in low establishment success of inbred individuals. The modest relatedness suggests that biparental inbreeding depression is unlikely to be an immediate problem following fragmentation of large populations. The results further indicate that habitat structure may contribute to governing fine-scale genetic structure in G. conopsea.

An experimental field study of inbreeding depression in an outcrossing invasive plant.

Inbreeding depression is likely to play an important role during biological invasion. But relatively few studies have investigated the fitness of selfed and outcrossed offspring in self-incompatible invasive plants in natural environments in their introduced range. Moreover, the majority of studies on inbreeding depression have investigated self-compatible species with mixed mating, and less is known about the intensity of inbreeding depression in outcrossing self-incompatible species. Here, we address these questions experimentally by comparing selfed and outcrossed progeny of purple loosestrife (Lythrum salicaria) over four growing seasons, including three under field conditions in a freshwater marsh in southern Ontario, Canada, a region where L. salicaria is highly invasive. The tristylous mating system of L. salicaria involves disassortative mating among floral morphs enforced by trimorphic incompatibility. However, owing to partial incompatibility, self-fertilized seed can be obtained by manual self-pollination thus facilitating comparisons of selfed and outcrossed progeny. We compared progeny with and without intraspecific competition from selfed or outcrossed neighbours and examined the influence of breeding treatment and competition on fitness correlates by measuring a range of life-history traits including: proportion of seeds germinating, days to germination, survival, proportion of plants flowering, time to flowering, vegetative mass, and inflorescence number and mass. We analysed data for each trait using functions from time series estimates of growth and two multiplicative estimates of fitness. We detected varying intensities of inbreeding depression for several traits in three of the four years of the experiment, including inflorescence mass and reproductive output. Cumulative inbreeding depression over four years averaged δ = 0.48 and 0.68, depending on the method used to estimate multiplicative fitness. The competition treatments did not significantly affect plant performance and the magnitude of inbreeding depression. Given the primarily outcrossing mating system of L. salicaria populations, the detection of inbreeding depression for several key life-history traits was as predicted by theory. Our results suggests that biparental inbreeding and low selfing in colonizing populations may have significant effects on demographic parameters such as population growth.

Assessing the genetic vulnerability of Macaúba palm [Acrocomia aculeata (Jacq.) Lodd. ex Mart.] through the mating system and genetic diversity of open‐pollinated progenies

AbstractAt present, intelligent and sustainable agriculture presupposes a compromise between maximising crop yield and minimising its risk of genetic vulnerability. Breeding programmes should implement strategies that allow the development of superior genotypes and preserve genetic diversity, especially in perennial plants. The Macaúba palm (Acrocomia aculeata) is a species with the potential to produce oil at a level comparable to that of the oil palm, even in water‐deficient areas, which motivates its commercial interest and drives an increase in demand for seedlings from natural populations for commercial plantations. Therefore, to evaluate the impact of this selection procedure on the reduction of genetic diversity and, consequently, the genetic vulnerability of commercial planting, in the present study we analysed the population mating system and the genetic diversity of Open‐Pollinated Progenies (OPPs) from selected seed‐trees in relation to the genetic diversity of respective native populations (NPs). To achieve this, we evaluated the mating system and genetic diversity employing 14 microsatellite markers (SSR). The mating system indices estimated for A. aculeata palm indicated that the species present a mixed mating system () with a predominance of outcrossing. However, at the population level, the outcrossing rate ranged from . The biparental inbreeding rate was considered moderate (), with some variation between populations (from 0.0005 to 0.275). The multilocus correlated paternity was , ranging from 0 to 0.112 at population level, indicating that a significant portion of the progeny consisted of half‐sibs. The results demonstrate that there was no significant loss of genetic diversity of OPPs derived from artificial selection within NPs. In the OPPs the number of alleles (Na = 2.55) was similar to that of NP (Na = 2.56). Furthermore, the mean values of observed heterozygosity (HO) between NP and OPPs were similar, with a mean of 0.366 and 0.356, respectively. In conclusion, the procedure adopted to produce commercial seedlings in the present study should not represent a high risk of genetic vulnerability. In addition, our results will provide a guidance to breeders regarding selection intensity in both natural and improved populations, aiming to optimise the advancement of generations, thereby maximising future genetic gains while preserving genetic diversity. However, we recommend verifying the outcrossing rate and genetic diversity at the population level, as these factors could have significant effects on the vulnerability of the species and the macaúba crop.

Genetic diversity and mating system of Euterpe precatoria in three localities along the lower Solimões River in Central Amazonia

Abstract Euterpe precatoria is a Neotropical palm from South and Central America and is hyperdominant in Amazonia, where it is increasingly important in the Brazilian market for açaí. Genetic diversity, population structure and mating system of E. precatoria were characterized with 10 microsatellite markers in three localities (Codajás, Manacapuru, and Manaquiri) along the lower Solimões River, Amazonas, Brazil. Leaves of 63 mature palms were collected, as well as fruits from 30 of these to analyze 20 seedlings per progeny. Genetic differentiation across localities was substantial (G S ′ = 0.304) for mature palms, suggesting that gene flow is restricted between localities due to isolation by distance. Inbreeding was significant in progenies from all populations (ranging from 0.059–0.076), but not for mature palms, suggesting selection for heterozygosity during maturation to the adult stage. The outcrossing rate was high (0.917–1.0), confirming that the species is predominantly allogamous. Matings were not random due to the occurrence of biparental inbreeding (0.021–0.079) and correlated matings (0.059–0.424), so open-pollinated progenies present mixtures of self-sibs, half-sibs, full-sibs, and self-half-sibs, resulting in mean effective population size within progenies (2.23–3.06) lower than expected for a random mating population. The mating system’s characteristics are those expected in a predominantly allogamous hyper-abundant palm and suggest that human management of these often-anthropogenic populations is unlikely to reduce genetic diversity in the short term if done in situ, as practiced by Indigenous Peoples and local communities. Intensification will require careful attention to maintain genetic diversity.

Implications of community forest management for the conservation of the genetic diversity of big-leaf mahogany (Swietenia macrophylla King, Meliaceae) in the Maya Biosphere Reserve, Petén, Guatemala

Community Forest Management in the Maya Biosphere Reserve (MBR; Petén, Guatemala) has been recognized internationally for yielding forest conservation and socioeconomic benefits. However, the effect of current timber harvesting practices on the genetic diversity of timber species populations has not previously been documented. This study assessed the effects of timber harvesting on the genetic diversity and viability of regeneration of the most commercially important timber species in the MBR: big-leaf mahogany (Swietenia macrophylla King). Trees and seeds were sampled for two consecutive years in two Forest Management Units of the Multiple Use Zone (MUZ) of the MBR: Cruce a la Colorada and Carmelita. We correlated genetic diversity parameters (as measured using nuclear microsatellites) with seed germination percentages and compared genetic diversity of adults and seeds in stands that had been affected by timber harvesting and those that had not. We found a significant correlation between seed germination percentages (81–83%) and observed heterozygosity (rho=0.27), confirming that genetic diversity is important to regeneration success. No significant differences were found in allelic richness (AR), expected and observed heterozygosity (HE and HO), or inbreeding (FIS), between adults and seeds in harvested vs. undisturbed stands; or before and after timber harvesting. We found low inbreeding levels (FIS=0.040–0.094), low biparental inbreeding (0–0.01), and high outcrossing rates (0.925–0.970) in the populations of S. macrophylla analyzed. Our study therefore provides evidence that genetic diversity in big-leaf mahogany populations was not diminished by one cutting cycle under current practices of community forest management in the MUZ of the MBR.

Interpopulation variation in inbreeding is primarily driven by tolerance of mating with relatives in a spermcasting invertebrate.

The degree to which individuals inbreed is a fundamental aspect of population biology shaped by both passive and active processes. Yet, the relative influences of random and non-random mating on the overall magnitude of inbreeding are not well characterized for many taxa. We quantified variation in inbreeding among qualitatively accessible and isolated populations of a sessile marine invertebrate (the colonial ascidian Lissoclinum verrilli) in which hermaphroditic colonies cast sperm into the water column for subsequent uptake and internal fertilization. We compared estimates of inbreeding to simulations predicting random mating within sites to evaluate if levels of inbreeding were (1) less than expected because of active attempts to limit inbreeding, (2) as predicted by genetic subdivision and passive inbreeding tolerance, or (3) greater than simulations due to active attempts to promote inbreeding via self-fertilization or a preference for related mates. We found evidence of restricted gene flow and significant differences in the genetic diversity of L. verrilli colonies among sites, indicating that on average colonies were weakly related in accessible locations, but their levels of relatedness matched that of first cousins or half-siblings on isolated substrates. Irrespective of population size, progeny arrays revealed variation in the magnitude of inbreeding across sites that tracked with the mean relatedness of conspecifics. Biparental reproduction was confirmed in most offspring (86%) and estimates of total inbreeding largely overlapped with simulations of random mating, suggesting that interpopulation variation in mother-offspring resemblance was primarily due to genetic subdivision and passive tolerance of related mates. Our results highlight the influence of demographic isolation on the genetic composition of populations, and support theory predicting that tolerance of biparental inbreeding, even when mates are closely related, may be favoured under a broad set of ecological and evolutionary conditions.

Mating Systems of Single Families and Population Genetic Diversity of Endangered Ormosia hosiei in South China.

Ormosia hosiei is a tree species native to China that has been extensively used for ornamental and furniture purposes due to its valued timber. The mating system has substantial impact on genetic diversity and structure of plant natural population. Such information should be considered when planning tree planting for forest restoration. Here we used 12 microsatellite markers and described the mating system of single families and the population genetic diversity of O. hosiei. A high level of genetic diversity was observed in both adults and progenies, although slight differences existed among populations and their progenies, with the expected heterozygosity ranging from 0.763 to 0.794. Overall, O. hosiei displayed a predominantly outcrossed mating. The estimate of multi-locus outcrossing rate (tm) was high with low variations among families, ranged from 0.997 to 1.000. The value of tm-ts, ranged from 0.000 to 0.139, indicated that biparental inbreeding occurred in progenies. Therefore, to obtain a reasonable genetic representation of native tree species and prevent problems associated with inbreeding depression, we suggested effective in situ conservation by replanting seedlings, but seedling production for restoration purposes may require a much larger sampling effort than is currently used. Moreover, it is necessary to conduct further multiple population and multi-year experiments to verify our conclusions.

High outcrossing rates in a self-compatible and highly aggregated host-generalist mistletoe.

Plants have evolved various strategies to avoid inbreeding, but the mass flowering displayed by many plants predisposes them to within-plant pollen movements and self-pollination. Mistletoes often aggregate at multiple spatial scales. Their bird pollinators often visit several flowers of the same individual and of others on the same host tree. We hypothesized that hermaphroditic mistletoes have self-incompatibility mechanisms that reduce or prevent selfing. Whether their spatial distribution, affected by host specificity, host distribution, and the behaviour of seed dispersers, influences their mating system and population genetic structure remains unclear. We studied how mating system and spatial distribution affect genetic structure in four populations of the host-generalist mistletoe Dendrophthoe pentandra in southwestern China using microsatellite markers and progeny arrays. We also characterized the fine-scale spatial genetic structure among 166 mistletoes from four host trees in one population. Prevalence and intensity of infection both appeared to vary among host species, strongly affecting the degree of aggregation. Host tree size had a strong effect on infection intensity. Surprisingly, manual pollination experiments indicated that D. pentandra is self-compatible, but genetic analyses revealed that outcrossing rates were higher than expected in all four populations (MLTR tm 0.83-1.20, Bayesian tm 0.772-0.952). Spatial genetic structure was associated with distance between host trees but not at shorter scales (within hosts). Our results demonstrate that the combination of bird pollination, bird-mediated seed dispersal, and post-dispersal processes result in outcrossing and maintain relatively high diversity in the presence of biparental inbreeding, despite very high local densities and possible self-compatibility.

Landscape genetics of the tropical willow Salix humboldtiana: influence of climate, salinity, and orography in an altitudinal gradient.

Gene flow in riparian ecosystems is influenced by landscape features such as orography, climate, and salinity. The downstream increase in genetic diversity (DIGD) hypothesis states that the unidirectionality of the watercourse causes an accumulation of genetic diversity toward downstream populations, while upstream populations are more structured and less diverse, especially in water-dispersed organisms. We used chloroplast and nuclear microsatellites to characterize genetic diversity, structure, and gene flow patterns among populations of Salix humboldtiana across an elevation and salinity gradient on three rivers (Actopan, Antigua, and Blanco) in Mexico. We used optimization of resistance surface methods to determine whether genetic distances between populations are correlated with landscape features. Positive FIS values evidenced biparental inbreeding in some populations, particularly at higher elevations where lower niche availability constrains colonization and persistence. Four genetic groups were distinguished, corresponding to populations on the Actopan and Antigua rivers and upstream and downstream on the Blanco, but with high admixture between populations on the Actopan and Antigua rivers. Higher gene flow rates were found among proximate populations on the same river than among different rivers. Genetic diversity increased toward the river mouths, in support of the DIGD hypothesis, probably due to greater niche availability and larger population size. Differences among rivers in precipitation patterns and salinity, as well as geographic distance, were significant predictors of gene flow. Our results depict that the DIGD and gene flow patterns in S. humboldtiana result from the complex interaction among physiography, climate, river salinity, and life-history traits of the species.

Mating behavior and reproductive morphology predict macroevolution of sex allocation in hermaphroditic flatworms

BackgroundSex allocation is the distribution of resources to male or female reproduction. In hermaphrodites, this concerns an individual’s resource allocation to, for example, the production of male or female gametes. Macroevolutionary studies across hermaphroditic plants have revealed that the self-pollination rate and the pollination mode are strong predictors of sex allocation. Consequently, we expect similar factors such as the selfing rate and aspects of the reproductive biology, like the mating behaviour and the intensity of postcopulatory sexual selection, to predict sex allocation in hermaphroditic animals. However, comparative work on hermaphroditic animals is limited. Here, we study sex allocation in 120 species of the hermaphroditic free-living flatworm genus Macrostomum. We ask how hypodermic insemination, a convergently evolved mating behaviour where sperm are traumatically injected through the partner’s epidermis, affects the evolution of sex allocation. We also test the commonly-made assumption that investment into male and female reproduction should trade-off. Finally, we ask if morphological indicators of the intensity of postcopulatory sexual selection (female genital complexity, male copulatory organ length, and sperm length) can predict sex allocation.ResultsWe find that the repeated evolution of hypodermic insemination predicts a more female-biased sex allocation (i.e., a relative shift towards female allocation). Moreover, transcriptome-based estimates of heterozygosity reveal reduced heterozygosity in hypodermically mating species, indicating that this mating behavior is linked to increased selfing or biparental inbreeding. Therefore, hypodermic insemination could represent a selfing syndrome. Furthermore, across the genus, allocation to male and female gametes is negatively related, and larger species have a more female-biased sex allocation. Finally, increased female genital complexity, longer sperm, and a longer male copulatory organ predict a more male-biased sex allocation.ConclusionsSelfing syndromes have repeatedly originated in plants. Remarkably, this macroevolutionary pattern is replicated in Macrostomum flatworms and linked to repeated shifts in reproductive behavior. We also find a trade-off between male and female reproduction, a fundamental assumption of most theories of sex allocation. Beyond that, no theory predicts a more female-biased allocation in larger species, suggesting avenues for future work. Finally, morphological indicators of more intense postcopulatory sexual selection appear to predict more intense sperm competition.

So close, so far: spatial genetic structure and mating system inPetunia exserta, an endemic from a peculiar landscape in the Brazilian Pampa grasslands

AbstractGene flow via seed or pollen dispersal is fundamental for establishing population diversity and structure of plants, especially in naturally fragmented environments. Petunia exserta (Solanaceae) is endemic to small shelters in rocky towers in the Brazilian Pampa grassland, an ancient and isolated region. The landscape is a long-term fragmented habitat, and ecological conditions inside the shelters constitute an inhospitable environment for other Petunia spp., which usually inhabit open and sunny grasslands. We aimed to evaluate the mating system and gene flow impact on genetic diversity and population structure in P. exserta throughout its geographical range. We used eight microsatellite markers to employ fine-scale genetic structure and paternity analyses in 15 populations, including 361 adults and 244 progeny. Our results showed that P. exserta has low genetic diversity and a homozygous excess compared with its congeners. We identified four genetic clusters that did not reflect the spatial population distribution and a strong genetic structure at the first spatial distance. Pollen and seed dispersal mainly occurred at short distances, and the species has a mixed mating system with high selfing levels. We did not observe recent population reduction, and most population clusters showed a small effective population size. The landscape micro-habitat features contribute to pollen flow that occurs mainly inside shelters through geitonogamy or biparental inbreeding. The self-compatible status of P. exserta and related lineages could be important in the colonization of a new environment for the genus.

Depicting the mating system and patterns of contemporary pollen flow in trees of the genus Anadenanthera (Fabaceae).

Anadenanthera (Fabaceae) is endemic to the Neotropics and consists of two tree species: A. colubrina (Vell.) Brenan and A. peregrina (L.) Speg. This study examined the mating system and contemporary gene flow of A. colubrina (Acol) and A. peregrina (Aper) in a highly fragmented area of the Atlantic Forest to provide valuable information that informs conservation strategies. Reproductive adults from forest remnants [nA. colubrina = 30 (2.7 ha), nA. peregrina = 55 (4.0 ha)] and progeny-arrays (nA. colubrina = 322, nA. peregrina = 300) were genotyped for seven nuclear microsatellite markers. Mating system analyses revealed that A. colubrina is a mixed mating species (tm = 0.619) while A. peregrina is a predominantly outcrossing species (tm = 0.905). For both Anadenanthera species, high indices of biparental inbreeding were observed (Acol = 0.159, Aper = 0.216), resulting in low effective pollination neighborhood sizes. Categorical paternity analysis revealed different scales of pollen dispersal distance: the majority of crossings occurring locally (i.e., between nearby trees within the same population), with moderate pollen dispersal coming from outside the forest fragments boundaries (Acolmp = 30%, Apermp = 35%). Nevertheless, pollen immigration from trees outside the populations for both species suggests that the populations are not reproductively isolated. This study highlights the importance of evaluating both mating system and contemporary gene flow for a better understanding of the biology of Anadenanthera species. This information should be considered to ensure the effective conservation and management practices of these plant species.

Long pollen dispersal prevents biparental inbreeding depression in seeds in a natural population of the tropical tree Shorea laxa

The aim of this study was to detect biparental inbreeding depression in seeds in a natural population of the tropical tree Shorea laxa. Using microsatellite markers, we conducted parentage analysis and directly estimated outcrossing rate and contemporary pollen dispersal across a natural population (100 ha). We found a high outcrossing rate and frequent long pollen dispersal in S. laxa, even though the population-level flowering during the study was not intensive. We also found a significant but weak negative correlation between pairwise relatedness and spatial distance between adult trees. Structural equation modeling revealed significant decrease in seed size with increasing pairwise relatedness of seed parents, indicating biparental inbreeding depression and also indicating a positive contribution of maternal internal relatedness and a negative contribution of pollen dispersal distance to the relationships among seed size and pairwise relatedness of seed parents. These results suggest that long-distance pollen dispersal is essential to prevent biparental inbreeding depression in S. laxa. When developing conservation strategies for S. laxa, attention must be paid to the breeding structure and phenology to ensure long-distance pollen dispersal and prevent reproductive isolation and inbreeding.

Tropical deforestation reduces plant mating quality by shifting the functional composition of pollinator communities

Abstract Deforestation can impact the quality of pollen received by target plants (i.e. delivery of incompatible pollen, self‐pollen or pollen from closely related individuals). Such reductions in plant mating quality may be direct, when deforestation reduces plant population size and the availability of pollen donors, or indirect, when decreased mating quality results, for example, from shifts in the composition of the pollinator community. As most flowering plants depend on animal pollinators for reproduction, there is a need to understand the direct and indirect links between deforestation, pollinator community composition and plant mating quality. We quantified the direct, pollen donor‐mediated and indirect, pollinator‐mediated effects of deforestation on mating quality in Heliconia tortuosa, a tropical herb pollinated by low‐ and high‐mobility hummingbirds. We used a confirmatory path analysis to test the hypothesis that deforestation (amount of forest cover and forest patch size) influenced mating quality (haplotype diversity of pollen pools, outcrossing and biparental inbreeding) directly and indirectly through functional shifts in the composition of pollinator communities (proportion of high‐mobility hummingbirds). We found that deforestation triggered functional shifts in the composition of pollinator communities, as the proportion of high‐mobility hummingbirds increased significantly with the amount of forest cover and forest patch size. The composition of the pollinator community affected mating quality, as the haplotype diversity of pollen pools increased significantly with the proportion of high‐mobility hummingbirds, while biparental inbreeding decreased significantly. Although we did not detect any significant direct, pollen donor‐mediated effects of deforestation on mating quality, reductions in the amount of forest cover and forest patch size resulted in functional shifts that filtered out high‐mobility hummingbirds from the pollinator community, thereby reducing mating quality indirectly. Synthesis. Deforestation primarily influenced plant mating quality through a cascading effect mediated by functional shifts in the composition of the pollinator community. Our results indicate that plant mating quality strongly depends on the composition of local pollinator communities. Functional shifts that filter out highly mobile and effective pollinators may reduce the transfer of genetically diverse pollen loads from unrelated plants. Such shifts may have pronounced effects on plant population dynamics and disrupt genetic connectivity.

Evaluating restoration outcomes through assessment of pollen dispersal, mating system, and genetic diversity

Ecological genetics can provide a novel contribution to assessing the achievement of restoration objectives. We used paternity assignment to infer realized pollen dispersal within, and pollen immigration into, a restoration population of Hakea nitida, a common near‐coastal shrub or small tree in southwest Australia. We compared mating system parameters and genetic diversity with a nearby remnant reference population and assessed genetic divergence among the restoration and reference populations. We found realized pollen dispersal events closely tracked the frequency distributions of the distances between all plants within the restoration focus area. Mean realized pollen dispersal distance (359 m) approached the mean of the distances between all plants (407 m), far exceeding mean nearest neighbor distance (12 m). Maximum realized pollen dispersal distance (869 m) approached the maximum distance between all plants in the study area (1,033 m). Pollen immigration into the restoration study area was limited (4%). The mating system revealed moderate outcrossing rates (tm = 0.861 restoration and tm = 0.745 reference population), with significant and similar biparental inbreeding (tm − ts = 0.180, tm− ts = 0.186) but greater correlated paternity (rpm) in the restoration (0.519) than in the reference (0.188) population. Genetic divergence among the restoration and reference remnant population was moderate (FST = 0.094, DST = 0.239). Patterns of pollen dispersal and mating system parameters imply the attraction of pollinators within the restoration population as a key factor in progressing towards the establishment of self‐sustaining populations.