Bioturbated Sediments Research Articles

Linking fish bioturbation to life history in a eutrophic wetland: An analysis of fish contributions to internal nutrient loading

Abstract Bioturbation (sediment disturbance by animal actions) effects on nutrient cycling and nutrient levels in surface waters are difficult to quantify, in part because the diversity and magnitude of species‐specific influences are poorly understood. These influences may have consequences for the management of the trophic state of freshwater ecosystems. Fish cause bioturbation in freshwater and marine ecosystems by digging in benthic sediments, manipulating periphyton mats while searching for prey and scraping hard substrates while feeding. We used experimental enclosures (2.25 m2) to quantify bioturbation‐mediated phosphorus (P) and nitrogen (N) regeneration from sediment by three species of fish that differ in interactions with the benthos (largemouth bass, Micropterus salmoides; tilapia, Oreochromis spp.; and sailfin catfish, Pterogoplichthys spp.) in shallow eutrophic wetlands in Southern Florida. Tilapia are omnivores that include detritus in their diet (winnowing or ingesting sediments) and dig nests in soft sediments year round, sailfin catfish actively burrow into substrate and consume detritus (digging and ingesting sediments), and largemouth bass are piscivores that do not routinely interact with the benthos when feeding but may dig nests in soft sediment in spawning season (January–April). We quantified the amount of suspended flocculent organic matter and changes in water column nutrients (total phosphorus [TP] and total nitrogen [TN]) in 2‐week trials for each species and estimated the portion of nutrient increases relative to fishless controls that could be attributed to bioturbation‐mediated internal nutrient loading through suspension of organic matter (as opposed to excretion or other sources of nutrient loading). Water column nutrient concentrations increased with increasing biomass for all species, but the bioturbation contribution differed by species. Largemouth bass increased water column nutrient concentrations (TP: 86% and TN: 5% relative to controls) but did not influence water column suspended particulate matter through bioturbation of sediment. Tilapia increased water column nutrients a modest amount (TP: 8%; TN: 15%), of which a small portion was attributed to bioturbation (c. 18% of TP). Sailfin catfish raised water column nutrients substantially (TP: 105%; TN: 46%) and up to 100% of the increased TP was attributed to bioturbation. Sailfin catfish also suppressed algal growth and TP accumulation on the sides of the enclosures and reduced nutrient concentrations of the flocculent sediments. Our results were consistent with our hypothesis that behaviour and foraging traits affect bioturbation contributions to nutrient loading. The results also demonstrated that species with similar net effects like largemouth bass and sailfin catfish, added nutrients via different mechanisms (i.e. excretion vs. bioturbation). Considering the feeding strategies and interactions with the substrate of common fish species may assist managers in meeting nutrient reduction goals for eutrophic wetlands and managed freshwater systems.

The influence of bioturbator activity on sediment bacterial structure and function is moderated by environment

Bioturbation in coastal sediments plays a crucial role in biogeochemical cycling. However, a key knowledge gap is the extent to which bioturbation influences bacterial community diversity and ecosystem processes, such as nitrogen cycling. This study paired bacterial diversity, bioturbation activity and in situ flux measurements of oxygen and nitrogen from bioturbated sediments at six estuaries along the East coast of Australia. Bacterial community diversity, composition and predicted functional profiles were similar across burrow and surface sediments but were significantly influenced by bioturbator activity (measured as number of burrows) at sites with higher fine grain content. Sediment oxygen demand increased with bioturbator activity but changes in nitrogen cycling (as measured by fluxes and predicted bacterial functional gene analysis) were more spatially variable and were unrelated to bioturbator activity and bacterial community shifts. This study highlights how bioturbator activity influences bacterial community structure and functioning and what implications this has for biogeochemical cycles in estuarine sediments.

Caught in transition: changes in brachyuran diversity following mangrove encroachment into saltmarshes at a southern distribution limit

Mangroves are expanding polewards due to global change, often encroaching into adjacent temperate saltmarshes. In both vegetated ecosystems, brachyurans are responsible for ecological processes and functions such as nutrient cycling and sediment bioturbation. South African mangroves occur at a latitudinal limit and are establishing further south due to past planting events and global change, making these ideal study systems for the effects of mangrove expansion and encroachment. Here, we investigated the effect of mangrove encroachment on brachyuran community composition at two saltmarsh sites with planted mangrove stands of different ages. Transects were laid perpendicular to each estuary where three habitat types were demarcated (mangrove, ecotone, saltmarsh). Sediment samples were collected for analyses and quadrats were used to measure pneumatophore density, saltmarsh cover, and brachyuran abundance and diversity. We found that brachyuran community structure at each site has significantly changed over seven years, with two mangrove-associated fiddler crab species, Tubuca urvillei and Paraleptuca chlorophthalmus, now recorded at the younger planted site, indicating a new southern distributional limit. Community structure was also significantly different amongst habitat types (p < 0.05) with Parasesarma catenatum dominating saltmarshes while Danielella edwardsii was more prominent in mangroves. However, community composition did not differ significantly between the two (differently aged) sites (p > 0.05). Pneumatophore density had a proportional relationship with crab abundance, diversity and richness, while saltmarsh cover had an inversely proportional relationship with crab abundance, diversity and richness. It is likely that as mangroves continue to expand into saltmarshes, more mangrove-associated species will move into saltmarshes, potentially altering ecosystem processes in this unique habitat.

Bioturbation by Benthic Stingrays Alters the Biogeomorphology of Tidal Flats

Fishing-down-marine-food-webs has resulted in alarming declines of various species worldwide. Benthic rays are one examples of such overexploited species. On tidal flats, these rays are highly abundant and play an ecologically important role. They use tidal flats as refuge, feeding and resting grounds, during which they bury into the sediment, which results in sediment bioturbation. Changes in bioturbation intensity, following ray removal, may affect the biogeomorphology of tidal flats with possible cascading effects on the macrozoobenthic community. However, it is poorly understood how these indirect effects could influence ecosystem function. We therefore studied the geomorphic impact of benthic rays (specifically the pearl whipray/stingray Fontitrygon margaritella) on the tropical tidal flats of the Bijagós Archipelago, Guinea-Bissau, on a landscape scale. We investigated 1) bioturbation rates by rays using drone and ground surveys, 2) the spatial distribution of ray pits on multiple tidal flats, 3) the impact of rays on sediment properties and macrozoobenthos by experimental exclusion (15 months). Benthic rays bioturbated 3.7 ± 0.35% of the tidal flat’s sediment surface per day over one single 24-h period, which equals a complete top-sediment-surface turnover every 27 days. The spatial distribution of ray pits was affected by tidal flat geomorphology since pits decayed faster at areas exposed to strong hydrodynamic forces. Predator exclusion altered sediment properties, leading to changes in sedimentation (− 17%) and erosion (− 43%) rates. In addition, macrozoobenthic species composition changed, marked by an increase in Capitellidae worms and a greater biomass of Malacostraca over time. These changes indicated substantial effects of ray bioturbation on the biotic and geomorphic landscape of tidal flats. Overall, we conclude that changing abundances of benthic rays can have clear landscape-wide geomorphological effects on intertidal ecosystems. These indirect consequences of fisheries should be incorporated in integrative management plans to preserve tidal flats and connected ecosystems.

Impact of Chondrites on trace metal distribution in the sapropel S7 (ODP Site 966): Implications for paleoenvironmental and paleoceanographic reconstructions

Organic-rich deposits are valuable paleo-archives, recording significant paleoceanographic changes linked to past climate variations and marine deoxygenation events. The deposition of organic-rich sediments stops when bottom-water reventilation/oxygenation occurs. This impedes organic matter preservation, enabling macro and micro burrowing-organisms to recover and bioturbate the seafloor. In this sense, highly bioturbated sediments require particular attention when sampling is done for geochemical analyses, as sediments can be considerably mixed. While avoiding trace fossils during sampling for geochemical analyses is easy for large traces (e.g. Planolites, Thallasinoides, and Zoophycos), it becomes challenging for smaller and complex traces (< 0.5 cm), as is the case with Chondrites. Chondrites-producers have an opportunistic behavior, being one of the first organisms to colonize the seafloor after an anoxic event. As a result, Chondrites are commonly and sometimes abundantly found in the upper layers of organic-rich sediments, including sapropels and black shales.This study focuses on sapropel S7, which was deposited between ∼198.5 and 191.9 ka at the top of Eratosthenes Seamount and exhibits abundant Chondrites. For this sapropel, we demonstrated that Chondrites-producers can bioturbate significant volumes of organic-rich sediments (over 35%), introducing oxic/dysoxic material downward into anoxic sediments enriched in redox-sensitive trace metals and organic matter. This process can dilute up to 18% the original concentration of redox-sensitive trace metals (e.g. Mo, U and V). This dilution is especially important to consider when calculating trace metals and organic matter burial flux from bulk sediment data. Therefore, Chondrites-producers can play a crucial role in altering the sediment texture and distribution of minerals and organic matter at sub-cm scale, and may thus impact paleoenvironmental and paleoceanographic reconstructions based on geochemical signals. Furthermore, the subsequent redistribution of organic matter and redox-sensitive trace metals (including oligoelements) within the sediment can affect carbon and nutrient cycling, microbial activity, organic matter degradation in deep-marine sediments, and the overall sedimentary biogeochemistry.

Visean terrigenous sediments of the South Tatar Arch (Volga-Urals oil and gas bearing province) – multifacial filling of the karst surface of the Tournaisian isolated carbonate platform

The paper presents new thickness and sandiness maps of the Visean terrigenous strata (Radayevkian and Bobrikian regional stages, Lower Carboniferous) of the South Tatar Arch, constructed using the “Natural Neighbour” spatial interpolation method in ArcGIS Pro software based on the analysis of geophysical survey data for more than 30,000 boreholes. The interpretation of the maps in combination with the results of sedimentological, ichnotextural and petrophysical core studies, supplemented by the analysis of archival and published materials, provided an opportunity to update the approach to modelling the sedimentation of the terrigenous Lower Carboniferous of the South Tatar Arch. The proposed sedimentation models of terrigenous and coal-bearing sediments take into account the chronostratigraphic data, the karstification of isolated carbonate platforms, the sediment accumulation rates and the ichnotextural characteristics of the sediments. It is concluded that the accumulation and preservation of terrigenous and peat (coal-bearing) sediments differ in duration (0.1 million years vs. 1.5–2 million years) and are consequently associated with transgressive and regressive phases. The accumulation of terrigenous sediments includes: (a) transgressive eustatic episodes – short-term incursions of a marine basin onto the eroded surface of an isolated carbonate platform, during which silty and sandy, well-sorted bioturbated sediments were accumulated, often with a variety of ichnofossils of marine benthic organisms; (b) the regressive eustatic phase resulted in the predominant erosion of sediments on the arch; whereas sediments in the incisions were largely preserved. The accumulation of peat (coal-bearing) deposits includes (a) the regressive eustatic phase, during which the vast area of the eastern Volga-Urals region was covered with flourishing vegetation and stable swamp environments were forming in the incisions of the Tournaisian surface; (b) the transgressive phase – the peat was overlaid and buried by transgressive marine silt-sand sediments; then it was compacted and transformed into coal. The alternation of coal-bearing and transgressive intervals indicates the cyclicity of these processes. The proposed sedimentation models extend the concepts of previous studies and are consistent with the developed maps of thickness and sandiness of the Lower Carboniferous terrigenous sediments, explaining the complex, covering and mosaic distribution of sand bodies over the area, as well as the filling of incisions with sediments of different lithological types.

How to quantify blue carbon sequestration rates in seagrass meadow sediment: geochemical method and troubleshooting

Seagrasses take up carbon dioxide and transform it into organic carbon, some of which is buried in meadow sediments. Very high carbon burial rates have been claimed for seagrass meadows globally, and international protocols have been developed with a view to awarding carbon offset credits. However, recent geochemical work has shown that a misunderstanding of how marine sediment buries and processes organic carbon has led to overestimates of at least an order of magnitude. Common blue carbon methodology does not adequately account for bioturbation or remineralization in surface sediment, and there is often a conflation of standing stock with ongoing burial. To determine accurate seagrass carbon burial rates requires the following steps: (1) Determine the sediment accumulation rate below the surface mixed layer, using 210Pb and porosity; (2) Determine the burial concentration of organic carbon; (3) Multiply the sediment accumulation rate by the buried % organic carbon; (4) If excluding allochthonous carbon burial, use biomarkers to determine the proportion of seagrass-derived organic carbon; and (5) Account for the offset due to the burial of carbonate formed inside the meadow. Seagrass meadows provide valuable habitat and protect coastlines from erosion. They can also play a role in short-term carbon sequestration. However, if carbon credits are awarded based on inflated estimates and used to offset emissions elsewhere, the net effect could be an increase in carbon dioxide emissions to the atmosphere.

The vertical distribution of 27 elements in bottom sediments reflects the modern history of the hypersaline lagoon

Knowledge of the distribution of various elements in the bottom vertical cores helps to assess current levels and to reconstruct the history of a water body. There is little to no bioturbation of bottom sediments in hypersaline lagoons/lakes, and vertical distribution of elements in the sediments is not distorted. The vertical distribution of 27 elements was studied in one of the Crimean hypersaline marine lakes. Their determination was carried out in layers one centimeter thick, which were taken from a depth of 1 cm to 28 cm. Using the technogenic radionuclide 90Sr, the time intervals when various layers of bottom sediments were formed had been previously determined. The concentrations of most elements, as well as their ratio, changed quasi-cyclically. For most of the elements for which such changes were noted, the maximum peak values were in the layers that formed in 1976 and 2006. The authors concluded from this that there appears to be a natural rhythm with a period of about 30 years. Not only a concentration of technogenic radionuclide 90Sr but also Mo, Ba, Tl, Sb, Se, and Ag reacted strongly to the accident at the Chernobyl nuclear power plant in 1986 due to atmospheric fallout and transportation of elements via the Dnieper river waters through the North Crimean Canal.

Biological matter enhanced iron release from shallow marine bioturbated sediments: a case study of Late Cretaceous sandstone, northern Saudi Arabia

Biological matter enhanced iron release from shallow marine bioturbated sediments: a case study of Late Cretaceous sandstone, northern Saudi Arabia

Preservation of Soft-Bodied Organisms in Early Cambrian Carbonates

Abstract —Preservation of soft-bodied organisms as casts is common in the Ediacaran fossil record and extremely rare in Cambrian rocks. Among the factors, limiting fossilization of soft tissues, there is bioturbation–sediment disturbance by burrowing organisms. It is the emergence of burrowing metazoans and associated sediment bioturbation that is thought to be one of the major causes for the disappearance of Ediacaran soft-bodied organisms from the fossil record around ~540 Ma. Here, we study an assemblage of fossils preserved as casts in the Fortunian carbonates of the Olenek Uplift (northeastern Siberian Platform) in association with a typical Fortunian ichnoassemblage. The overall morphology and preservation of the fossils reveal that they comprise microbially induced sedimentary structures and soft-bodied holdfasts. The latter are vaguely reminiscent of some Ediacaran holdfasts, though it is unlikely that they include their phylogenetic descendants. Three-dimensional preservation of the studied fossils was caused by authigenic crystallization of calcite and its further early-diagenetic dolomitization. Our study confirms the critical importance of specific environmental conditions ensuring preservation of soft-bodied organisms as three-dimensional molds and casts. This unique interplay of environmental factors became rare in the Cambrian Period, which was caused by intensification and expansion of bioturbation in marine basins.

A PacBio Hi-Fi Genome Assembly of the Painter's Mussel Unio pictorum (Linnaeus, 1758).

The highly diverse group of freshwater mussels from order Unionida is found in the world's freshwater systems due to several fascinating evolutionary adaptations, including "parental care," and most notably, an obligatory parasitic phase in their early life cycle, called glochidia, which infests and uses fish for nutrition and dispersal. Freshwater mussels play essential ecological roles in freshwater habitats, including water filtration, sediment bioturbation, and nutrient cycling. However, these species are also highly threatened, being one of the faunal groups with the highest recorded extinction rate in the wild. Genomics methods have an incredible potential to promote biodiversity conservation, allowing the characterization of population health, identification of adaptive genetic elements, delineation of conservation units, and providing a framework for predictive assessments of the impact of anthropogenic threats and climate change. Unfortunately, only six freshwater mussel species have had their whole genomes sequenced to date, and only two of these are European species. Here, we present the first genome assembly of the Painter's Mussel, Unio pictorum (Linnaeus, 1758), the type species representative of the order and the most widespread species of the genus in Europe. We used long-read PacBio Hi-Fi sequencing reads to produce a highly contiguous assembly that will pave the way for the study of European freshwater mussels in the Genome Era.

The microbial landscape in bioturbated mangrove sediment: A resource for promoting nature-based solutions for mangroves.

Globally, soils and sediments are affected by the bioturbation activities of benthic species. The consequences of these activities are particularly impactful in intertidal sediment, which is generally anoxic and nutrient-poor. Mangrove intertidal sediments are of particular interest because, as the most productive forests and one of the most important stores of blue carbon, they provide global-scale ecosystem services. The mangrove sediment microbiome is fundamental for ecosystem functioning, influencing the efficiency of nutrient cycling and the abundance and distribution of key biological elements. Redox reactions in bioturbated sediment can be extremely complex, with one reaction creating a cascade effect on the succession of respiration pathways. This facilitates the overlap of different respiratory metabolisms important in the element cycles of the mangrove sediment, including carbon, nitrogen, sulphur and iron cycles, among others. Considering that all ecological functions and services provided by mangrove environments involve microorganisms, this work reviews the microbial roles in nutrient cycling in relation to bioturbation by animals and plants, the main mangrove ecosystem engineers. We highlight the diversity of bioturbating organisms and explore the diversity, dynamics and functions of the sediment microbiome, considering both the impacts of bioturbation. Finally, we review the growing evidence that bioturbation, through altering the sediment microbiome and environment, determining a 'halo effect', can ameliorate conditions for plant growth, highlighting the potential of the mangrove microbiome as a nature-based solution to sustain mangrove development and support the role of this ecosystem to deliver essential ecological services.

Sedimentary deposits and bioturbation in an Early Cretaceous subarctic stormy greenhouse shelf environment

This study of the Aptian lower part of the Carolinefjellet Formation in Svalbard, Norwegian high Arctic, is based on well cores and outcrop section in the Adventdalen area of Spitsbergen and reports on the deposits and bioturbation structures of an ancient subpolar marine shelf from a well-known period of global greenhouse climate. The study documents the sedimentation conditions and benthic fauna activity on a warm-water aggrading shelf subject to harsh Arctic wave climate and eurybatic base-level changes, with episodic bottom incursions of cold polar water. Lithofacies associations and 38 observed ichnotaxa represent subenvironments ranging from offshore to lower shoreface and hosting the Cruziana ichnofacies in its distal to proximal expression, with a brief mid-Aptian encroachment of middle shoreface zone with a distal expression of the Skolithos ichnofacies. The ichnofacies are variously impoverished compared to their archetypes. The sediment bioturbation intensity varies, but similar lithofacies associations show a comparable intensity throughout the stratigraphic succession, which indicates an ichnofauna ecology controlled by the seafloor hydraulic regime and oxygenation, and thus mainly by the wave climate and relative sea-level changes. Sandstone tempestites indicate high-frequency storms, commonly exceeding the magnitude of largest modern hurricane events. The study confirms that a change in global climate mode, such as the Early Cretaceous warming, entails extreme weather conditions.

Temporal dynamics of heatwaves are key drivers of sediment mixing by bioturbators

AbstractHeatwaves affect tidal flat ecosystems by altering the bioturbating behavior of benthic species, with potential consequences for sediment oxygenation, particle mixing, and erodibility. Although the frequency and duration of heatwaves are expected to increase under global warming scenarios, we lack insights into how heatwaves' temporal dynamics affect bioturbating behaviors. Using the widely distributed bioturbator Cerastoderma edule as model species, we quantified how heatwaves with identical heat‐sum but different temporal dynamics (i.e., 3‐ vs. 6‐d heating and normal temperature cycles) affect bioturbating behaviors and the sediment mixing processes in tidal mesocosms. Our results show that short but frequent 3‐d heatwave cycles increased the magnitude of bioturbating behaviors, thereby resulting in more bio‐mixed sediment than observed under infrequent prolonged 6‐d heatwave cycles. This unexpected result could be ascribed to the weakening health condition indicated by a high death rate (47.37%) under 6‐d heatwave cycles than in 3‐d and no‐heatwave control cycles. Present findings reveal that the impact of heatwaves on sediment bioturbation will strongly depend on the temporal dynamics of future heatwaves: bioturbation will be enhanced unless the heatwave duration exceeds species resistance and increases mortality.

Integrated effects of bioturbation, warming and sea-level rise on mobility of sulfide and metalloids in sediment porewater of mangrove wetlands

Global warming and sea-level rise exert profound impacts on coastal mangrove ecosystems, where widespread benthic crabs change sediment properties and regulate material cycles. How crab bioturbation perturbs the mobilities of bioavailable arsenic (As), antimony (Sb) and sulfide in sediment-water systems and their variability in response to temperature and sea-level rise is still unknown. By combining field monitoring and laboratory experiments, we found that As was mobilized under sulfidic conditions while Sb was mobilized under oxic conditions in mangrove sediments. Crab burrowing greatly enhanced oxidizing conditions, resulting in enhanced Sb mobilization and release but As sequestration by iron/manganese oxides. In control experiments with non-bioturbation, the more sulfidic conditions triggered the contrasting situation of As remobilization and release but Sb precipitation and burial. Moreover, the bioturbated sediments were highly heterogeneous for spatial distributions of labile sulfide, As and Sb as presented by 2-D high-resolution imaging and Moran's Index (patchy at the <1 cm scale). Warming stimulated stronger burrowing activities, which led to more oxic conditions and further Sb mobilization and As sequestration, whilst sea-level rise did the opposite via suppressing crab burrowing activity. This work highlights that global climate changes have the potential to significantly alter element cycles in coastal mangrove wetlands by regulating benthic bioturbation and redox chemistry.

Effects of bioturbation by the fiddler crabLeptuca speciosa(Ives, 1891) (Decapoda: Brachyura: Ocypodidae) on mangrove peat in Barnes Sound, Florida, USA

AbstractBioturbation, which includes burrowing and foraging behaviors, is an important component of the functional role of fiddler crabs (Brachyura, Ocypodidae) within mangrove forests because it modifies sediment properties and composition of mangrove substrates. In this study, fiddler-crab population density and burrow architecture were measured to evaluate the influence of bioturbation by the fiddler crab Leptuca speciosa (Ives, 1891) on mangrove peat from Barnes Sound, Florida, USA. Measurements of burrow architecture were used to estimate the contribution of fiddler-crab burrowing to the bioturbation of mangrove peat. Comparisons were made between the total organic matter in bioturbated sediments, including feeding and burrowing pellets. A population density of 12 burrows m–2 was measured with no significant trends in the spatial distribution of fiddler crabs within the site. Although the deepest burrow depth was 18 cm, results show the upper 5 cm of the peat surface was consistently burrowed by crabs. Fiddler crabs were estimated to increase the total below-ground air-peat surface area m–2 by 5% and accounted for 22% of the excavated volume of mangrove peat per year. Fiddler crabs will thus rework the entire peat substrate within five years. Because data on carapace geometric mean size suggested that a juvenile population of L. speciosa was sampled, the bioturbation rate of the peat substrate will accelerate once this population matures. Feeding pellets had significantly lower percentages of total organic matter (P &amp;lt; 0.01) than other bioturbated peat samples, suggesting that fiddler-crab foraging behaviors significantly (P &amp;lt; 0.01) decrease the organic composition of surficial peats. These results imply that fiddler crab burrowing extends the depth of the taphonomically active zone thus enhancing mangrove peat decomposition and changing the bioavailability and distribution of organic matter in mangroves.

Impact of Sediment Bioturbation on Microphytobenthic Primary Producers: Importance of Macrobenthic Functional Traits

Impact of Sediment Bioturbation on Microphytobenthic Primary Producers: Importance of Macrobenthic Functional Traits

Multiscale Brazil nut effects in bioturbated sediment

Size segregation in granular materials is a universal phenomenon popularly known as the Brazil nut effect (BNE), from the tendency of larger nuts to end on the top of a shaken container. In nature, fast granular flows bear many similarities with well-studied mixing processes. Instead, much slower phenomena, such as the accumulation of ferromanganese nodules (FN) on the seafloor, have been attributed to the BNE but remain essentially unexplained. Here we document, for the first time, the BNE on sub-millimetre particles in pelagic sediment and propose a size segregation model for the surface mixed layer of bioturbated sediments. Our model explains the size distribution of FN seeds, pointing to a uniform segregation mechanism over sizes ranging from < 1 mm to > 1 cm, which does not depend on selective ingestion by feeding organisms. In addition to explaining FN nucleation, our model has important implications for microfossil dating and the mechanism underlying sedimentary records of the Earth’s magnetic field.

Can the bioturbation activity of the fiddler crab Minuca rapax modify the distribution of microplastics in sediments?

Fiddler crabs are known as “eco-engineers” who maintain habitat health through sediment bioturbation. They regularly interact with microplastics (MPs) due to their contact with the sediment. In this study we compared MPs concentration between burrows and pellets resulting from bioturbation, and MPs bioaccumulation in the soft tissues of Minuca rapax (Smith, 1870), along a gradient of urbanization in Isla del Carmen, southern Gulf of Mexico. Overall, MPs shape and color in the pellets and in the tissues reflected those of the burrow's sediments. MPs were more abundant and diverse in burrows (9 ± 12 MPs.g−1) than in pellets (5 ± 5 MPs.g−1) or in the soft tissues (1.3 ± 1.2 MPs.g−1). Bioturbation can concentrate MPs in pellets and tissues, depending on the MPs contamination and urbanization level. M. rapax is an important structuring agent of sedimentary MPs, showing a strong top-down translocation of MPs in subtropical tidal flats.

Sediment Disturbance Negatively Impacts Methanogen Abundance but Has Variable Effects on Total Methane Emissions.

Methane emissions from aquatic ecosystems are increasingly recognized as substantial, yet variable, contributions to global greenhouse gas emissions. This is in part due to the challenge of modeling biologic parameters that affect methane emissions from a wide range of sediments. For example, the impacts of fish bioturbation on methane emissions in the literature have been shown to result in a gradient of reduced to enhanced emissions from sediments. However, it is likely that variation in experimental fish density, and consequently the frequency of bioturbation by fish, impacts this outcome. To explore how the frequency of disturbance impacts the levels of methane emissions in our previous work we quantified greenhouse gas emissions in sediment microcosms treated with various frequencies of mechanical disturbance, analogous to different levels of activity in benthic feeding fish. Greenhouse gas emissions were largely driven by methane ebullition and were highest for the intermediate disturbance frequency (disturbance every 7 days). The lowest emissions were for the highest frequency treatment (3 days). This work investigated the corresponding impacts of disturbance treatments on the microbial communities associated with producing methane. In terms of total microbial community structure, no statistical difference was observed in the total community structure of any disturbance treatment (0, 3, 7, and 14 days) or sediment depth (1 and 3 cm) measured. Looking specifically at methanogenic Archaea however, a shift toward greater relative abundance of a putatively oxygen-tolerant methanogenic phylotype (ca. Methanothrix paradoxum) was observed for the highest frequency treatments and at depths impacted by disturbance (1 cm). Notably, quantitative analysis of ca. Methanothrix paradoxum demonstrated no change in abundance, suggesting disturbance negatively and preferentially impacted other methanogen populations, likely through oxygen exposure. This was further supported by a linear decrease in quantitative abundance of methanogens (assessed by qPCR of the mcrA gene), with increased disturbance frequency in bioturbated sediments (1 cm) as opposed to those below the zone of bioturbation (3 cm). However, total methane emissions were not simply a function of methanogen populations and were likely impacted by the residence time of methane in the lower frequency disturbance treatments. Low frequency mechanical disruption results in lower methane ebullition compared to higher frequency treatments, which in turn resulted in reduced overall methane release, likely through enhanced methanotrophic activities, though this could not be identified in this work. Overall, this work contributes to understanding how animal behavior may impact variation in greenhouse gas emissions and provides insight into how frequency of disturbance may impact emissions.